Basic Information

Gene Symbol
CSRNP3
Assembly
GCA_900474335.1
Location
UCOL01000305.1:60290-68807[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.9e-102 1.2e-97 326.9 5.8 1 218 499 713 499 713 0.91
2 3 0.88 2.7e+04 -4.5 1.5 64 79 724 739 716 752 0.37
3 3 0.076 2.3e+03 -1.0 2.2 50 103 957 1008 952 1021 0.56

Sequence Information

Coding Sequence
ATGGAGCCGCTCCACGGTGAGGCGAGCGGCCCGGAGGCTACTGGCATCAAGTGCTACGCCTTCCTCGATGAGCTAGACCAGCTGGCGACGACCCCGGCGGCTCCCATCGAGGCTCCCGCTGCTCCGGTGCTCTGCGAGGACGGCGAGCTTCTCCCGGATATGGGCGGCTACGCCTCCAAGAATCCCGCCGAAGAAGATGCTAGGTTAGGCCCCTCGACGAGCGTCGACCTGCCGAAGGACCCCGAGGAATCGGCTCCTCAGCAGACGTCGACCCCCACTCCCATCCGACAGAGGCCCTCCTCGACGCTGCCGACGCCGTCGCTCTCCCAGGCGGGCGTCGGCGTCTCGGACTTCCAGCCCATCGGGGCGGAGGTGTCCGAGGAGAAGGCCCGCCAGCTCAGGAACGACGTGCGCCGACTGTCGCCGGTGCACGTGAGCCTGCGCGAGCGGACCCTCGGCGAGGTGTCGCTGACCTCGGAGGTGCCCCTCGGCGACCTGTCGGCGGTCCTCGCCGACGGCTGCCTCCCCGACGGACTCGAGCCGGGCTGCGAGAGCGAGTGCGCGAGTGCCGACGAACTGGACGACGATCTGCCCGATGCCGCGCGGACCGCCGGCAAGAAGCGCAACCGCGAGCTCGTCATCCGGCTGTCGCGCGTCGACAGGAACAGCCCCAgcccgcagcagcagcccgaggcggcggcgacgccCCCGCCGCCTCCTCCCTTCGAGCCCAGCGAGCTCCTGAAGGTGCCTTCGCCCTGCCCGTACGGCACGAACCTGGTGCTCCAGCGCTGCGACGGCCAGAGCTTCGTCGACGGCAACAACCCCGTCGAGTCCCCCTCGAGGAGCCTCGAGCCCAAGACGATAATCGAGAAGCTCCACATCGGCGACGAGATCGAGTTCTCGAGCccgacggcgacgacggcggcggcgaaccGCTGCCGCACCTCCTCGCCACCGCCTCCCGTCTTCCCCGAGGAGGCCTCGGAGGACGACAGCTCGGAGGTGCTGGCCTcgatggcggcggcggccgccgggGTCGAGATGCCCGGCGAGGACGGGCTCTCCCAGGCGATAATGACGAGGCTCGAGCAGGACAGACCCGAGCCCTTCACCGAGGACTCGGCCGAGAGCCTCGCCCTGGCCGCCGGAGCGAGGGACGAGGTCAGGTCCGACGGGAGCGACTCCGGATTGGGCATCGAGATGCCCGGGGAGCCGGGGGTGCCGCCGCCCGCCCCGGAGAGCGACAGCGAGACCTCCTTCTTGGACAGGATACCCGACGACATTCTCTCCGATAAGGATAAATTAGCGGACCATCTGGACGGTTTCGAACCGGAAGTGATGAGGAAGCTGAAACTGCCGAATCTGCATCTGCTGCCCGGTAAGAGCAACCTGAAACGCCGACTGACCGACTGCCTGGAGGAGGGAGAGGATCAGCAGCCCGGCGCCAAGAGGCTGAACGTCGACGGAGTCGCCTCGACTTCCTCGATGACCAAGAAGAAGCGCAACATTCAGTTCGACGCGGTCACGGTCTACTACTTTCCCAGGGCCCAAGGCTTCACCTGCGTGCCTTCACAGGGCGGCAGCACGCTGGGCATGGGCGCGATCCACTCGCACGCGGAGCGCTTCTCGCTGTCGGAGCACGCGGCGGAGCAGCGTCGACTCCACCGGGCCCGGCTCGCCCAGATGCGCTCGGAGCGCTCGAACGGCACCGTCTCGGCGGCCTCGTCGGAAGGGGCCTCGAGCTCGGAGGACCCGAGCGACGACACGGACGAGGAGCCGAGCGACGCCGAGGAGCTCGACATCGACAGCTACTACTTCCTGCAGCCGGTGCCCACCTGGCAGAGGCGGGCGCTCCTGCGCGCCGCCGGGGTCAGGAGGATAGACTCGATGGAGAAGGACGAGTGCAGGGACATCAGGGCCAGCAGGGAGCactgcggctgcggctgcaAGGGATACTGCGACCCGGAGAGCTGCCCCTGCAGTCGGGCCAACGTCAAGTGTCAGGTGGACAGAGCGGGCTTCCCGTGCGGCTGCTCGCGTGACGGCTGCGCCAACAGTTCCGGTCGCATCGAGTTCAATCCCGTCCGCGTGCGCACGCACTTCATCCACACGCTGATGCGCCTCGAGCTCGAGAAGAAGCCGCCGCACCACCGCAGCGACGAGGAGGCCAGCCACCACCAGGAGAgccaccagcagcagcaacaccaCAGTCACCACGGCGGCCAGCAACAGCAGCCGAACCGACTGGCGGTGCCGATGGACCCATCGCCCGCCGGCGACTGCGGCGGCTTCACCGGCCTGCACTACGACAGCCAGGACTCGGGAGCGAGAGGCGACAGTCTCGATCTCTATACGATCAGGGACGACTGCTACCCGGGCGACGACTGCCTGGGAGACGGCTCCCAGAGCCAGCAGCAGAGAAAACAGATGCACGCCGAGTTCGGGCAGGGATTTCATTACGGGGCTCAGAGCTCCGGCGTCGGCTTTCAGCAGAATCCCTACGCGGATTATCAGAGCTATCAGTCCATGCCATCGACCTCTAGGTCGCCCTTTCAGACACAATTCCAGAGCGTCGCGACGAGCTCCGGCTTCTCGCACTACTCGTACGGACAGGACTCGAGCTCAAGCGCCGGAAGCGCTCATCAGAGTCACTCGCTcctccagcagcagcaacagcagcccGGCAACACCATCTACGACGCGCCGTTCGCTCAGGACGAGGTGACCGGCACGCAGTACACGAATCTCAGTTCGATGCAGCCAATGGGCTCGGTCGTCCAGCAGATCGGCAAGCTCGAGTCCTTCTCCGAGCTGCTGTCCGCCAGGTACTCCTACTACGGCGACTGCCTCGATCCACAACCCAGCCATcatcatcagcagcagcagcccaacgaacagcagcagcagcaacaccaTCATCACGGTGCTTACGAGGCCACCGGGGCCAAGCTCGACATCGACAAGGGCAACGAGCTCGTCGGCAACCAGCAGACGAATCAGCTCGCCGAGGACGACTGCGACGAGAATTTCGGGGAGATTATCAAGAAATCGATGGTCGAGACAGTTTCTGCTTAA
Protein Sequence
MEPLHGEASGPEATGIKCYAFLDELDQLATTPAAPIEAPAAPVLCEDGELLPDMGGYASKNPAEEDARLGPSTSVDLPKDPEESAPQQTSTPTPIRQRPSSTLPTPSLSQAGVGVSDFQPIGAEVSEEKARQLRNDVRRLSPVHVSLRERTLGEVSLTSEVPLGDLSAVLADGCLPDGLEPGCESECASADELDDDLPDAARTAGKKRNRELVIRLSRVDRNSPSPQQQPEAAATPPPPPPFEPSELLKVPSPCPYGTNLVLQRCDGQSFVDGNNPVESPSRSLEPKTIIEKLHIGDEIEFSSPTATTAAANRCRTSSPPPPVFPEEASEDDSSEVLASMAAAAAGVEMPGEDGLSQAIMTRLEQDRPEPFTEDSAESLALAAGARDEVRSDGSDSGLGIEMPGEPGVPPPAPESDSETSFLDRIPDDILSDKDKLADHLDGFEPEVMRKLKLPNLHLLPGKSNLKRRLTDCLEEGEDQQPGAKRLNVDGVASTSSMTKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMGAIHSHAERFSLSEHAAEQRRLHRARLAQMRSERSNGTVSAASSEGASSSEDPSDDTDEEPSDAEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDSMEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCSRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKPPHHRSDEEASHHQESHQQQQHHSHHGGQQQQPNRLAVPMDPSPAGDCGGFTGLHYDSQDSGARGDSLDLYTIRDDCYPGDDCLGDGSQSQQQRKQMHAEFGQGFHYGAQSSGVGFQQNPYADYQSYQSMPSTSRSPFQTQFQSVATSSGFSHYSYGQDSSSSAGSAHQSHSLLQQQQQQPGNTIYDAPFAQDEVTGTQYTNLSSMQPMGSVVQQIGKLESFSELLSARYSYYGDCLDPQPSHHHQQQQPNEQQQQQHHHHGAYEATGAKLDIDKGNELVGNQQTNQLAEDDCDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01113418;
90% Identity
iTF_01112588;
80% Identity
-