Basic Information

Gene Symbol
-
Assembly
GCA_900474335.1
Location
UCOL01009350.1:1280-2557[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.2e-08 6.7e-05 23.7 0.8 4 29 278 304 275 312 0.94

Sequence Information

Coding Sequence
ATGACACAGCCGGAGGAAACAGAAAAAAGCTCCTATGGGAATTTTAGACAACCTATAAGCAACGAAGAAACGTTTAACTCAGCTTTTGCTGAGtccaaagtaatttttaaggaaaaaaaaaacaatccagAAACGAAGTCAGAAGAAAACACCAAAGAGACATCCATTGGCCATGTAGAAATCATCAGCAAAGTAATCGACgttgatcaaaatttaaaaaacatcgtAAACAATACAAACACAAATAATATGGtggaagaaagtaaaaataaaaaagaatctttagaGGCAGAACCAACAATTAGACGAAGAGGAAGTATAAAAACGGAAGAAACACCAACAGTAGTTAAGAAAACATGGAGTCGTAGGCGTAAAACTAATGTCTTACAGGACAATTCAACGATTATTAGTAATAGTCTTAATACGGAAGAAACGCCTAAAGTAGTCAAGAAAACTTGGAGTCGACAGCGTAAAACCAACAAGTCATCCCAAGACGACATTATAAGCGCGAGTAGCCCAGTTAAAAAGACAAAAGGTAGGAGAAGAAGGTCTATGAACGATAAGACTGTATTAGGCGATTCAGAGACGCTCATAGGACAATTACACGCTCAAAACTCTCCAATAAAAAGGCTAAAGCGCGGAAGAAACAAAAAGGTGCAGCCCTCGTTACCAGATAAAGTAGAGGATGTATATATCGAATCGGAAGAGTCCAAAGACACTGTTATTGATGAGTTTAGGGAAGATGACGACAGAATCGATCttcatataaatgaaaatagagaagaagaagatctAGGCTTTTGCTATAAAGCGCCAAAAAAGAAGTTGTGGTGGACCGAAGCAGAGACAAACGCACTCATTGAGGGAGTTAAAAGATTTGGTAGAGGCAAATGGAAGAAAATTCTTGACGAGTATATTGAAATCTTTCAAACTAGACGAAAGGCTAGAGACCTTTCTGACAGGATGAGGATTGTAGATAAAAGATCTTCTTTGTACGTTTTCCCGGACACTGTTTATAcagaaattgatgaaaatcaCGAGCCAGTGCGAAATAAAGACGGCACaccgaaaacttttatttgtaaatttccaCACGAGGCGGCGCTCATGGCAGCAAGTGATTTAAGTTTGTTTGGAAAAGACGACATTGTTAGAATGGGCTGTGATGATGCCAATGGAAAGGCTGTTCACATTTACAGGGTGCTTAAAGGGTTCAATGGAAGAAGAAGAGTAAGAAAAATATCCGGAAAGAGTGGAAAACGTGTTGATGGCTGGTGA
Protein Sequence
MTQPEETEKSSYGNFRQPISNEETFNSAFAESKVIFKEKKNNPETKSEENTKETSIGHVEIISKVIDVDQNLKNIVNNTNTNNMVEESKNKKESLEAEPTIRRRGSIKTEETPTVVKKTWSRRRKTNVLQDNSTIISNSLNTEETPKVVKKTWSRQRKTNKSSQDDIISASSPVKKTKGRRRRSMNDKTVLGDSETLIGQLHAQNSPIKRLKRGRNKKVQPSLPDKVEDVYIESEESKDTVIDEFREDDDRIDLHINENREEEDLGFCYKAPKKKLWWTEAETNALIEGVKRFGRGKWKKILDEYIEIFQTRRKARDLSDRMRIVDKRSSLYVFPDTVYTEIDENHEPVRNKDGTPKTFICKFPHEAALMAASDLSLFGKDDIVRMGCDDANGKAVHIYRVLKGFNGRRRVRKISGKSGKRVDGW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00933714;
90% Identity
-
80% Identity
-