Basic Information

Gene Symbol
BAS1
Assembly
GCA_900474335.1
Location
UCOL01005389.1:8197-10941[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.01 11 6.9 0.0 22 43 235 258 221 261 0.75
2 5 1.2e-10 1.3e-07 32.4 0.6 1 44 267 312 267 314 0.96
3 5 4.6e-08 5e-05 24.1 0.1 2 43 322 367 321 370 0.95
4 5 1.7e-11 1.9e-08 35.0 0.0 1 43 376 419 376 422 0.90
5 5 5.8e-10 6.3e-07 30.1 0.1 4 43 432 471 429 473 0.94

Sequence Information

Coding Sequence
ATGAATAGTGACGATGAAGATAATCAATCTTTAATAGATGAAATTAATGCTTTAGAGAATGTCTTAgatcaaaaacaattttcaagaaataatgAATCAACAATTActgatatttcaaaatcagTTGTGCCATTAAAATTAGAAGCAGAACatgaaaatgaatatgaaGAATATGATGAGAGGTTTATGGAGGTGGATGAAAATTCTGATGAAGATAAtccatataaaaattatacctgTGAAGATTTACAAGACTTATTagaacttaataaaaaattaattgaatcaatTTCAGAAGCTCATGATAAAATGATAGTGCTTCTTGATGAATGCACTAACAACCAACGGGTTGTCGAAGAacagattaataaatatacaactAATTACACaatgaaattgatttcttttaatgCTGGTATGccatattttaaagataagaaCTATTTTAgtccgaaaaaaaatgaggatacggaaaaaaagataagaaatGGTGAATTACGTTTAACTGAGCTTCAACGTATTAATAGGTGGAACCAAGGAGATAAAGCTTTTTTGCTAAAAGCTATAAAACATGAAGTAACATTAAACTTACTAAAGACAAATGAATCTGACGATCCATTGCTTGACAATATTATCACAAAAACAAGTCGTTTACCTTCAGAAGTAAAGAAGGCTATTGGATCTTTAGGCACAATGAAATTTGACTGGATGAAAATAGCTAATAAAATGCCAGAAAATAAGCATAGTGCAGAAGAATGTGAAGTTATGtggaatgtttttttacatcccgatattaataaacaaaaatggacttctaaagaagataaaactttaaactgtatagtagaaaattttgaatttgaaaattgggNTGCCATTGCTAAACAATTGAATACAAAACGTAGTGGCTATCAATGTTTTGTTAGATATAACACAAACAACTGGAAAAATCTTATGAAAGGTCAAACTTGGTCGCCAGAGGATGATAGAATTCTCCTACAccttgtttcaaaattaaaaattggagATTATATTCCATGGGGATATATTTCAAGTTGTATGAATAGTTGGACAAAGCAGCAGgtATATTTTAGATGGATGTATAGTTTAGCacctcatttaaaaaaagggaaattttCACAAGAAGAAGATAAACAGCTTCTAGAAGCAGTAGACAAATATGGACAAAACTTTAGTAAAATATCTGCCATAGTCATGACTCAAAGAACAAATATTCAGTTAAaagagcattttaaaatattattagctaGAAGTCAAcagccaaaaaaaatttggacaTTAGAAGAAGATCAGAAACTCACTgaactttataaaatctatGGTCCAAATTGGGCAAAAATTGTAAGAGAAATGTCAAATGTTAGTAGAGTGCAAGCTAGACAACGCTATAATGCACTTTCacgtttatataaaaaaggttcagatttacaaatgaaatatcAAGATAATGCTGAAAAGGAAGTGCCGGTAATTCATACAACATTAACATATACAACTAAGTCACCTTGGTCgcgtgaaaataaagaaatatatgtcaaatatttaaaaattgataatcagcttattgacttttttaaaaaagaaagtatgattaaaaaattagaaagaaagTCTTATATgccggaaaaattaaaacaggaTACTAAAAGgctttatcaaattttgttaaaatttaatgcgaaTCTTGAACTACCATCTTATGTAGACCCATCTTTTGATTTGGATGAAAAAAGTCAGCAATTACTAGTTTCATTGAGAGATTACACAAAAGGTCAAAACACaaatttagatgaaaaaattgaacaagtAAGATTGCAAATGTTTGGTCCTCAACAGCAAATGTCAGAGAAAGATCGATTTATTCCACCTTTACCATTCGGTTTTTGTATTCCACGGTCGAAAGGAAAACCctctaataaaattgattatacgCCTAAAAGGAGCGATGTTCACCAAATAATGCCTGAAATGGAGTTAGAATCAAATCCATATGTTTCTGAATGCCTCGGAGAAGATATCGaaatacaatttgaaaaattcaataaattattgataaaaagttgttttgaAAAACCAAGCAAAGTTTATTCTATCAAATGTAAGTCCTTTGCAAGTAAAGATTTCTTTGAAGCAACAGGAAGATATCATCCTTATGGGCAACCACAAAATATTCAGTTGAAATTTGATTGGAATACAGGTACTATGGTACCCTATAATTCTACGTCTACAAAAGAAACAGTTATGGTAGAAGGTGCTCCAGTGCGGATAGTAGAACCAAACAGAACAACGTTACAAGCATATCACGAGTTGATACTTATGTCTAGTGTGTTTCCTTCGAGTTCTGAAACATCtagtaataattacaaattgacTTCAAAAGGTCGGGAGGccttatatttgtttaaaaaacgttaTGAACAACTTTTTCACGTGTCAACTGGTTTATCAAGAATAATACCACCTGATGTTGTTGATGAAAGTGTATTTTTACCtgcagttgaaaaatttaaaaagaaagctaTAAAACATAAGAAagcaaagaaacaaaaaaatgtaaatatggaTACAAGCACAGCATAa
Protein Sequence
MNSDDEDNQSLIDEINALENVLDQKQFSRNNESTITDISKSVVPLKLEAEHENEYEEYDERFMEVDENSDEDNPYKNYTCEDLQDLLELNKKLIESISEAHDKMIVLLDECTNNQRVVEEQINKYTTNYTMKLISFNAGMPYFKDKNYFSPKKNEDTEKKIRNGELRLTELQRINRWNQGDKAFLLKAIKHEVTLNLLKTNESDDPLLDNIITKTSRLPSEVKKAIGSLGTMKFDWMKIANKMPENKHSAEECEVMWNVFLHPDINKQKWTSKEDKTLNCIVENFEFENWXAIAKQLNTKRSGYQCFVRYNTNNWKNLMKGQTWSPEDDRILLHLVSKLKIGDYIPWGYISSCMNSWTKQQVYFRWMYSLAPHLKKGKFSQEEDKQLLEAVDKYGQNFSKISAIVMTQRTNIQLKEHFKILLARSQQPKKIWTLEEDQKLTELYKIYGPNWAKIVREMSNVSRVQARQRYNALSRLYKKGSDLQMKYQDNAEKEVPVIHTTLTYTTKSPWSRENKEIYVKYLKIDNQLIDFFKKESMIKKLERKSYMPEKLKQDTKRLYQILLKFNANLELPSYVDPSFDLDEKSQQLLVSLRDYTKGQNTNLDEKIEQVRLQMFGPQQQMSEKDRFIPPLPFGFCIPRSKGKPSNKIDYTPKRSDVHQIMPEMELESNPYVSECLGEDIEIQFEKFNKLLIKSCFEKPSKVYSIKCKSFASKDFFEATGRYHPYGQPQNIQLKFDWNTGTMVPYNSTSTKETVMVEGAPVRIVEPNRTTLQAYHELILMSSVFPSSSETSSNNYKLTSKGREALYLFKKRYEQLFHVSTGLSRIIPPDVVDESVFLPAVEKFKKKAIKHKKAKKQKNVNMDTSTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01112516;
90% Identity
iTF_01111691;
80% Identity
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