Basic Information

Gene Symbol
XBP1
Assembly
GCA_900474335.1
Location
UCOL01003287.1:1656-3247[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-13 1.8e-10 41.4 13.3 2 62 103 163 103 166 0.94
2 2 0.0012 1.9 9.3 3.7 24 59 139 174 139 185 0.92

Sequence Information

Coding Sequence
ATGAGCGCCCTGAAGAGCGTTATCATCACCTTGCCCCAATCGACCAAGGGTCTCGCTGCTAAGAGTCCCAGTATTATCTCCTCTGGAGACCTCAAGCAGGCCTCGAAGCTTAATTTCACCACGTCTATTCTCATGGATAAGATCAAATTAGAAAACGGAACCACTGGATCAGCCAAAAAGCTCCAGTCTGTTAAACATATGGAGCTAGGTATGTCTGTTCCGATGGTTGCTGATACTGTGGTGCTCAAGCAGGAGAATTCTGTTCCTGCGAGGGGCAAGAAGCGCAGACTGGATCACCTTACTTGGGAGGAAAAACTTCAAAGGAAAAAACTAAAGAACAGAGTAGCAGCACAGACTTCTCGAGATCGCAAGAAGGCAAAATTAGATGAATTGGAAGACACAGTCAGATTACTCAAGGAAAGAAATGATATGCTTGTTAAAGAATGCTCAATGTTGAGGACACAAAATGAATCACTTATCTCAGAAACCAAGAGGCTAAAAAGGGACAACAAAGAATTGACAGAGTTTAAGGAATCCAAGGAGCAGGTGTGCTCAATGTGTCAAGGCCGTGTCGGCTGTATTGTACCAGCGCTGGGATCAGCAGTATCCCCCAATAACCCTCTGCAGCAGGGTGGCACAGTACAAACGGCACAATCTCTGACACTAACTCCAAGCGCAACCATACTCCTGAAGATCCTGACACTCTACCTGCTCTCGAAGACCTATTTGGCGAACTCCAAGGAGATGACTACATCGAGAGACTCGAAGAACTTGCCGAAAGCCTTCTGCGAGAGGTTACCACTGAAGTGGAAACAAATTCTGCTCAGTCAAATGAACAGGACACAATTGAAAGGGAAAGTTccaaagaatttgaaaatacagaACAAATGGTGGGGGAGACATCAAGTTATGTGGAAGCCGCCGATTCAGTCTGCGACAACGTAG
Protein Sequence
MSALKSVIITLPQSTKGLAAKSPSIISSGDLKQASKLNFTTSILMDKIKLENGTTGSAKKLQSVKHMELGMSVPMVADTVVLKQENSVPARGKKRRLDHLTWEEKLQRKKLKNRVAAQTSRDRKKAKLDELEDTVRLLKERNDMLVKECSMLRTQNESLISETKRLKRDNKELTEFKESKEQVCSMCQGRVGCIVPALGSAVSPNNPLQQGGTVQTAQSLTLTPSATILLKILTLYLLSKTYLANSKEMTTSRDSKNLPKAFCERLPLKWKQILLSQMNRTQLKGKVPKNLKIQNKWWGRHQVMWKPPIQSATT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01112338;
90% Identity
iTF_01112338;
80% Identity
-