Olab021916.1
Basic Information
- Insect
- Ormyrus labotus
- Gene Symbol
- pnr
- Assembly
- GCA_035582975.1
- Location
- JAWWEO010020540.1:7976-9252[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-18 1.5e-14 53.9 2.6 1 34 11 43 11 45 0.96 2 2 1.8e-19 7.5e-16 58.1 7.0 1 35 70 103 70 104 0.98
Sequence Information
- Coding Sequence
- ATGGACTTTCAATTTAGTGAAGGTCGGGAATGCGTAAATTGTGGAGCCATATCTACCCCATTATGGCGACGCGATGGTACTGGTCACTACCTCTGCAACGCCTGCGGCCTTTATCACAAAATAAATGGCATGAACCGTCCTCTCATTAAACCCACGAAACGCCTCATTTCCGAATTCCAGACGGCGGCGAGGCGACTTGGACACTGCTGCTCTAACTGCGGGACGCGCACAACTACCCTCTGGAGGCGCAACAACGACGGTGAAACCGTTTGCAACGCTTGTGGCCTCTATTACAAATTGCACGGAGTAAATCGACCACTGGCCATGAGAAAAGACGGTATTCAGACGCGCAAACGGAAACCCAAGAAAACGCCAGAACCGAATGCGCGACAGCCTTCGACCGATAACGACAACAATACCTCCACTGCCTCCTCGCCTTCAAACGAAATGAAGAATAGCCACCACCAACCACACCAGCAGCCGCATCAAACTCAACAGCCGCATCAACTTGACGTTAAATCATCTTCCGTAAATAATTCATCATCTTCTACAGACCGACCGGTTTATCTCGGACACACATCTCTCTTGTCGCCGAGCAGCGCTACCCCAATGCCCACGGTGAAAACGGAACCGCGCACTTGCGAGGGAGGTGTCATTAGCAGTCAGTCTTATTCGACGTATTATCAGCACCCACACCAGGTTAGCGCGCCGACAAGCGAACACCAGCAAGCCAATTACTATGCTACCCAAGAAGCGCCCTATCATCATCAACATCATGTAACCGCGGCTGCTAAGCTTCTGGCCTCTTCTTAA
- Protein Sequence
- MDFQFSEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKINGMNRPLIKPTKRLISEFQTAARRLGHCCSNCGTRTTTLWRRNNDGETVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKTPEPNARQPSTDNDNNTSTASSPSNEMKNSHHQPHQQPHQTQQPHQLDVKSSSVNNSSSSTDRPVYLGHTSLLSPSSATPMPTVKTEPRTCEGGVISSQSYSTYYQHPHQVSAPTSEHQQANYYATQEAPYHHQHHVTAAAKLLASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00739597;
- 90% Identity
- iTF_01112259;
- 80% Identity
- iTF_01113108;