Olab020825.1
Basic Information
- Insect
- Ormyrus labotus
- Gene Symbol
- -
- Assembly
- GCA_035582975.1
- Location
- JAWWEO010019929.1:51412-67938[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 8.9 9.3e+02 1.3 0.4 2 10 3 11 2 13 0.86 2 24 0.044 4.6 8.6 1.1 1 21 31 51 31 52 0.95 3 24 0.022 2.3 9.5 3.6 1 21 60 80 60 83 0.95 4 24 0.013 1.3 10.3 3.6 2 21 91 110 90 111 0.94 5 24 0.00012 0.013 16.6 1.3 1 23 117 140 117 140 0.97 6 24 0.029 3.1 9.1 7.0 1 21 149 169 149 170 0.94 7 24 0.46 48 5.4 1.5 2 23 177 199 176 199 0.94 8 24 0.025 2.6 9.3 1.8 1 23 884 907 884 907 0.97 9 24 0.017 1.8 9.9 4.2 1 21 920 940 920 941 0.94 10 24 0.026 2.7 9.3 7.3 2 23 949 971 948 971 0.95 11 24 0.0025 0.26 12.5 2.6 1 21 984 1004 984 1005 0.96 12 24 5.2 5.4e+02 2.1 4.5 1 15 1125 1139 1125 1145 0.83 13 24 0.054 5.7 8.3 0.8 2 20 1164 1182 1163 1184 0.93 14 24 2.2 2.3e+02 3.2 2.2 1 23 1192 1215 1192 1215 0.96 15 24 0.18 19 6.7 2.6 1 23 1352 1374 1352 1374 0.94 16 24 2.5 2.6e+02 3.1 8.9 1 23 1391 1414 1391 1414 0.97 17 24 0.0099 1 10.6 0.2 1 23 1433 1456 1433 1456 0.93 18 24 0.25 26 6.2 0.2 3 20 1461 1477 1459 1479 0.84 19 24 9.4 9.9e+02 1.2 0.3 12 23 1499 1510 1488 1510 0.83 20 24 0.067 7 8.0 3.6 1 23 1524 1547 1524 1547 0.97 21 24 0.019 2 9.7 4.7 2 23 1560 1582 1559 1582 0.95 22 24 0.41 43 5.5 0.5 3 21 1587 1604 1586 1605 0.82 23 24 0.00036 0.038 15.1 6.2 1 23 1613 1636 1613 1636 0.96 24 24 0.00028 0.029 15.5 0.8 3 21 1644 1662 1642 1663 0.92
Sequence Information
- Coding Sequence
- ATGATCTACTGCTCTAAATGCGACAAAAGCACAAAGCTCATAACCTGGAATAAAGACGTCCGCTGCGAAACGTGCGAGTCAAACGTAGTTTACGCATGCGCCCGTTGCCAAAAACGCTATCAAAGGATCAAGTCGTTGCGCGCCCATCTTCGTCATCTCTGCGGCAAAGAGCCCAAATACTACTGCGCCCACTGCGACTACAAGACGGCGCGCAAGGCAAGCCTGCAGGTACACGTCAGGTGCAAGCACTCGGAGCTAGGCAAGGAGCAGGAGTGCTTAAAGTGCGGCAAGAAGTACAAGCACCGCTCCCACATGTTGTACCACCAGAAATACTGCGGCGCGAAGAACTTCACGTGCGACCGTTGCCCCCGCAAATTCTCTAAGCCTATTTACCTTCAGATGCATATTAGAAATAAACACACAGATCCGGAGGCACTTGAATATCATTCTTGCGAGAGCTGTCAGAAGAAGTTCAAGCATCATTCCAACTATTACCGACATCGAAAGATTTGCCAAGAAGAGAAATGGAAGTGCGAGCACTGCGGGTATTGGACTAGACAAGAGCAGAAATTGATGAATCATGTTAAAGAGAAACATAAGCAGGAGACTAAATCGAAAGTTAAGGAACATGTTAAACCAAAACTTGAGGATCTTCCCACCCCGAAACTTGAGGATTCGGCTAAGAATCAGAAAGGAAGATTTGCTTTGAAGAGGAAGAgatACGAAATAACAGGATTTACAGAGACTGACGCAATTAGGCACAGAAAAAAGAGGGCATCGTCTACAAATTCTGCACGTAGATACTCAAGCGAATCAGATTATATTGTTCAAGATAATAATGGATTAGATTTGGCAATTAACTTACCACcaaattcagaaattaatcataatattGTAACTGCTTATAGCCAGggTTACCCTATGATGAACGTCAGAGAATGGGTTCAACATTATGATAACAACAATTATAGGCAGTGCcctttagaaaaagttttggaTAGCGGTGTAGTAGAACCAGCTGATCGGCGAGCTCTGGTCAGAATAATTGTTGAGGGAATGGTGCAGTACAATTGTGGTAActtATATCCATCGTGTCAGTTGAAAAACCAACTAGCAAAAGATGTAATTAGTGCTTTTCCAAAACTGCGTTCTGCAAGCGGGGGTCAtGAACATTTTTTCGAaccaaaaacaaacaaaggCTTTATagaatttagattaaaaactcttcgtttaaaactaaatactCAAAAGAGGAACCGAGGACCTTCTAAAGAAAGAAGAACGTCTATATCTCACAAAATACCCgctaaaattgcaattatgGAAAATTTACTAGACGAAGAAGTATTCAAAGCAAAAGTTTCCGAATTAACTTCGTTACTGTCGTCTGAAGAAAATagaagtaaaataatgaaacttaGTGATGAAACTAGACCTAATCGACAGAGACAAATAAAGACTGCGCTTGAACGAATACCAATTGATGTAATACTTACTTTATATCCTAAATTTACTGCATTCAATGGTGAACTGatacgGAAAGAATTTTTAGCTGAATATCCCAACCACGACATATTCTTAAATAGATTTACTTCGTTTTATTCTGTcagaattttacaatattgcgCAACTACAAAACCTCAACTTTTACAAGCCGTTCATGATATAGAAGATcGTCATTTGAAGGCACTATTAATTTTGCCAGAATTACTTCCGATTCCTAACTATCACAAAAGGAAAGACAAAGAAAGACAAAGTgaTTTATTCTTACCATTTAAGCCGTATAAACCATTTAACAAAGACATACCAAATGATAGTTTGATTCAGTACATCAGAGCAACAGATGAAGTATTTCTGCGAAATGTTCGTTCTAATAAGAGTCCATATTTGGTTTGCTTCATGAAAGATTACTATAGAAAAGGCGACTTTTACATTAGGGCCGACAGTTATCAAATAGAAACGAAACCATTCTTAAAAATCCGTGAAATAAGATCTCTGAGACCAAAGGAATATACTTCTTGTCATTATCCAgatgaagATCCAAGTCAATCTAAATATCTCAATTACAATGAAACTGATGATGAAGATGaatcgaatttaaataattcttattcaGATTCTGAATTGGTACCTTTTGGATTAAATTTTGCGGGTTCAGAGAATGTAGAGAAAGTAGAGAATGTAGAGGATGTAGAGGATAAATCGAGCGATGAAGAATACAACCCGGATGAGGATGATTGTGAAGATGAAACACTAAGtaggaaaaaaaatggcaaaatagAGACTGTTAACGAAAGCAAAACAATAAATCTTGAGCtcataaaagaagaaattattgTTGAGTCCGATGAATCCGTAGTATACGATAACAATTGggAAACTCTAAATGACGGAGAAGAAACTTTGGacaatttctttcaaaacgaATTGGTCGACGCTGCTGCCAAAGAagGAACCATCTCTGAGCTACTTAAGGTGCACTGTGAGACCTGTGGCACGACCAACCAGAACTCCAACCCCGATAATCTGGTTTCACGTTGTCAGGACTGCACGACAGAGCTGAAATTTCAGTGCGCCAAATGCGATCGTCTCTATACCTTATTCAACAGAGCGCGCAATCACGCGCTGACGTGCAACCAACCAATGTGGTACTCGTGTTCCACATGCAATTACAAGACCCTGACCAAGTTCAATTTGACGCTGCACATTCAGACAATTCATATGCTCCATCCGGACGATGACGATGATTCCGAGCATCACAGTTGCGTCCGGTGTGGCCGAAAGTACAAGCGCCGCAAGCACATGCTAAGACACCAGAAGCTGTGCGGAAAGACACCCCACATCAGGTGCAAGTTCTGTCAATACACGACCAAGAGGACTGACCACCTCAAGCAACATATGCAGCACCGGCACCCGGAGCACGATTTACAGCAAAACAGTTCGATGATTTACAGTTGTCCGAGGTGCCACAAGAAGTATAAGTATCTGATGTCCCTCAAGACACATATCAAGCAATttACGGAGGCTGTGAGAATAAAACCTATAAGTGAACTTAGAGATAGCCAAGTTGTAGCTCGTCCATTAAAAGatatagAATTTGTTGGCGTTGAGGCTGATCTTGAATACGctcaagtaaattttgaaacgttCCTTGTAAAAGAAGAGCATTCTTTTGAAGACGAGCAgtccgataaaaataatttggatGAAACGGAACTGACTGAAGATAATTCAAATCCTCTTGAGCGTAAATCAAAATGGAAAGAAATCAACGAGAATCTCTTGGTGTATTGCCGCCGCTGCAAGAAGCTCTCGCCAAAGATCCACGGGAAGAAGCACGTCCTCTGCAGGACCTGTTTCTCCGTGCTGCTGTTCCAATGCAAGAACTGCAGCCGGCAATTCAAGACTTACGGAACCTGCCACCTGCACGTCAAGGCCTGCTGCAAGCGTCCCCCGGAGCCCCCGAAAATCATGAGCAATATGCTGAAGGTGTGCAACTGGTGCAAAGGAAAGTACAAGACGGCCCATTCGCTCCAACGACACAAGGAGTGGAACTGCCCCAATAGACCCGAGCACAAGTGCATGCATTGCTCTTACTCGCCCGACACCAGGCAGTTACTTGTCGCCCATCTGGAGACGCAGCATCCAAGGCAGTACCAAGTTGGCATTTACCGGAACGTCTTCGTTTGCAAaggtgattttatttattataatcaacCGTTCGAGAAAGACTGTATTGATCTGACCATCGAGGATGTCTTTTGTATTCAAATATCTGAAACATctgactCTGATAGTAACGATATCATATGCGTTAACGATACAGAGCAGAGTATTATATTGAAACATGGATTATTCGCTAATGATGAAACTTTTGATGAGAACTCTTCGCATCCTCTTGATAATTTGAACTCTCAGGAGGAGATTGAAATTGGCCATGAGTCAgATTTCAATGAAACAATTCACTTACATTGTGGACTTTGTCTATCAACCAtcgcaaaaataaacattgacGAGTTCGAAATCTGCCAAGTTTGTTCGAACCCACTTCAGTATCAATGTGTAAAATGCGGTACTGGTTTCCGCACCTTAGAGTTTTGCATGCAACACCAAAACGATCACTGTTATTTGAAAGACAAGAACAAATCAATGTCAAACGAAGATGTGAAATTCAAGTGTCACCACTGTCTTTTCtcatcaaaaaaaattcattacctcAAAACCCACATTTTAATGAAGCACGATTCGACAAACTGTCATAACATTGACCCAAACAGGTTCGAAAGCCACGAGATCTTCGACTGCGACGACTGCAACTATTCAACCAACGCAAAAGCCAACATGCGCGTCCACATGGAGGGGAAACATTTAATGCAGAACTGTCCAAAGTGCAGCAAAACCTACAAGGTCAGGTCCCTTAAAGCTCACATTGTCAGATGTGCAGGAGTATGGAAGAAACTAACCTGTTTCCTCTGTAAGAATTTTAACGCTGAGCGTAATATAGATATGACCAGGCACATGCTGACGCACTTTCAGGATGGAGATTCGAAGGATGTGGAGCCGAAGAAATTCAAGTGCCCGCAGTGCAGCTTCAAGACCGATTTCAAGAACTATCTAAAGGTGCACACGCGGAACAAACATTCGGCAGGTAAACTCTTCGAACAGCAGGACACCTTGCACTGCGAGCACTGCGATTACCAGACCAAATACAAGAACGACTTGGCCAAGCATCTCAGGTACAGACATACCTTTGTCGATTGCAAGATTTGCGGACAGACGTACAGATATCAGAACATCTTCCAGCATCGGCAAACCTGCGGTAAGAATGAGAAGCCCTACAAGTGCACTATTTGCAATTATGCTTGTAGACGACCACATCATTTGAAGCTACATATGACCAATGTTCACGTGACACATCCCAGAGTTAATTGCAATAATTGTGACAGGAGCTTCAAGAATAAGGCGAGCATGAAACGGCATGCCAAGAATGTGTGCGGAAAGAGCAAGTGTTCCCGAAATTAG
- Protein Sequence
- MIYCSKCDKSTKLITWNKDVRCETCESNVVYACARCQKRYQRIKSLRAHLRHLCGKEPKYYCAHCDYKTARKASLQVHVRCKHSELGKEQECLKCGKKYKHRSHMLYHQKYCGAKNFTCDRCPRKFSKPIYLQMHIRNKHTDPEALEYHSCESCQKKFKHHSNYYRHRKICQEEKWKCEHCGYWTRQEQKLMNHVKEKHKQETKSKVKEHVKPKLEDLPTPKLEDSAKNQKGRFALKRKRYEITGFTETDAIRHRKKRASSTNSARRYSSESDYIVQDNNGLDLAINLPPNSEINHNIVTAYSQGYPMMNVREWVQHYDNNNYRQCPLEKVLDSGVVEPADRRALVRIIVEGMVQYNCGNLYPSCQLKNQLAKDVISAFPKLRSASGGHEHFFEPKTNKGFIEFRLKTLRLKLNTQKRNRGPSKERRTSISHKIPAKIAIMENLLDEEVFKAKVSELTSLLSSEENRSKIMKLSDETRPNRQRQIKTALERIPIDVILTLYPKFTAFNGELIRKEFLAEYPNHDIFLNRFTSFYSVRILQYCATTKPQLLQAVHDIEDRHLKALLILPELLPIPNYHKRKDKERQSDLFLPFKPYKPFNKDIPNDSLIQYIRATDEVFLRNVRSNKSPYLVCFMKDYYRKGDFYIRADSYQIETKPFLKIREIRSLRPKEYTSCHYPDEDPSQSKYLNYNETDDEDESNLNNSYSDSELVPFGLNFAGSENVEKVENVEDVEDKSSDEEYNPDEDDCEDETLSRKKNGKIETVNESKTINLELIKEEIIVESDESVVYDNNWETLNDGEETLDNFFQNELVDAAAKEGTISELLKVHCETCGTTNQNSNPDNLVSRCQDCTTELKFQCAKCDRLYTLFNRARNHALTCNQPMWYSCSTCNYKTLTKFNLTLHIQTIHMLHPDDDDDSEHHSCVRCGRKYKRRKHMLRHQKLCGKTPHIRCKFCQYTTKRTDHLKQHMQHRHPEHDLQQNSSMIYSCPRCHKKYKYLMSLKTHIKQFTEAVRIKPISELRDSQVVARPLKDIEFVGVEADLEYAQVNFETFLVKEEHSFEDEQSDKNNLDETELTEDNSNPLERKSKWKEINENLLVYCRRCKKLSPKIHGKKHVLCRTCFSVLLFQCKNCSRQFKTYGTCHLHVKACCKRPPEPPKIMSNMLKVCNWCKGKYKTAHSLQRHKEWNCPNRPEHKCMHCSYSPDTRQLLVAHLETQHPRQYQVGIYRNVFVCKGDFIYYNQPFEKDCIDLTIEDVFCIQISETSDSDSNDIICVNDTEQSIILKHGLFANDETFDENSSHPLDNLNSQEEIEIGHESDFNETIHLHCGLCLSTIAKINIDEFEICQVCSNPLQYQCVKCGTGFRTLEFCMQHQNDHCYLKDKNKSMSNEDVKFKCHHCLFSSKKIHYLKTHILMKHDSTNCHNIDPNRFESHEIFDCDDCNYSTNAKANMRVHMEGKHLMQNCPKCSKTYKVRSLKAHIVRCAGVWKKLTCFLCKNFNAERNIDMTRHMLTHFQDGDSKDVEPKKFKCPQCSFKTDFKNYLKVHTRNKHSAGKLFEQQDTLHCEHCDYQTKYKNDLAKHLRYRHTFVDCKICGQTYRYQNIFQHRQTCGKNEKPYKCTICNYACRRPHHLKLHMTNVHVTHPRVNCNNCDRSFKNKASMKRHAKNVCGKSKCSRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -