Olab002209.2
Basic Information
- Insect
- Ormyrus labotus
- Gene Symbol
- -
- Assembly
- GCA_035582975.1
- Location
- JAWWEO010000001.1:32190838-32213781[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 8.7e-06 0.00091 20.2 1.0 1 23 214 236 214 236 0.98 2 30 0.0037 0.39 11.9 1.9 1 23 260 283 260 283 0.96 3 30 0.0017 0.18 13.0 0.5 2 23 290 312 289 312 0.96 4 30 0.00089 0.094 13.9 1.6 1 22 332 353 332 353 0.95 5 30 0.022 2.4 9.5 0.4 3 23 461 481 459 481 0.95 6 30 0.0014 0.15 13.3 0.5 1 23 487 510 487 510 0.96 7 30 0.00016 0.017 16.2 0.1 1 23 578 601 578 601 0.96 8 30 0.0056 0.59 11.4 1.0 1 23 607 630 607 630 0.94 9 30 0.17 18 6.7 1.5 1 23 643 665 643 665 0.97 10 30 9.7e-06 0.001 20.1 1.0 3 23 709 730 708 730 0.96 11 30 0.063 6.7 8.1 0.9 2 23 796 819 795 819 0.92 12 30 4.3 4.5e+02 2.3 0.0 2 23 828 850 828 850 0.84 13 30 0.22 23 6.4 0.1 2 23 857 879 856 879 0.93 14 30 1.8e-05 0.0019 19.2 1.2 1 23 887 909 887 909 0.98 15 30 0.00071 0.075 14.2 1.5 1 23 986 1009 986 1009 0.97 16 30 0.0079 0.83 10.9 0.4 2 23 1016 1038 1015 1038 0.95 17 30 0.00098 0.1 13.8 4.8 1 21 1082 1102 1082 1103 0.94 18 30 0.0037 0.39 11.9 1.8 2 23 1117 1138 1116 1139 0.93 19 30 0.65 68 4.9 2.8 1 23 1142 1164 1142 1165 0.95 20 30 0.011 1.1 10.5 0.9 2 23 1172 1195 1171 1195 0.93 21 30 1.3 1.4e+02 3.9 0.2 2 23 1203 1225 1203 1225 0.95 22 30 5 5.3e+02 2.1 0.0 2 23 1232 1254 1231 1254 0.87 23 30 0.31 33 5.9 2.7 2 23 1263 1285 1263 1285 0.96 24 30 0.33 34 5.8 1.4 2 23 1291 1313 1291 1313 0.93 25 30 0.086 9.1 7.6 0.2 1 23 1377 1400 1377 1400 0.96 26 30 0.042 4.4 8.6 2.0 1 20 1432 1451 1432 1453 0.91 27 30 0.44 47 5.4 1.9 2 23 1545 1567 1544 1567 0.94 28 30 0.98 1e+02 4.3 0.4 2 23 1574 1596 1573 1596 0.95 29 30 0.23 25 6.3 1.8 1 23 1607 1629 1607 1629 0.97 30 30 0.13 13 7.1 0.4 2 20 1637 1655 1636 1657 0.91
Sequence Information
- Coding Sequence
- ATGGAGAACAGGGAGCGCTACGACGAGCTCTGCAGGCTCTGCGCCTCCTACGACGCCGTCAAGATGGACATCTTCGGACAGGAAGGCAAGAACCGACAGCTCGTCGACAAGATACAGACCTGCCTACCCTTTAAGATTACGGAGGATGACAGGCTGCCGAAATGCCTGTGCTACAGGTGCATGTATAACTTGGAGAATTTCTACGATTTTAGAACGGCCTGCGTCAATGCGGTCAGTTTGCTGGAGAGATGTCTGCCACCGAAAGAGTCAAAGACGGAGATAAAGGTGGAGATACAAGAAGAAGAGCCGTACTCGGAGCTGCGCATGGAATTGCTGAAGGAGAAGGAGAACATGCCGATGCTGATACCGGAGGCACCGGTCGTCAATCCCAACGCGGCCCTCGGCACTCCGCCCAGGCTCAGGTCTGACGGGGAGCCTGACAGCGAGGAGCTCAAGCAAGATGAAACCATGGAAGACCCCGACAAGTCGGACGAGTACGAGATGGACATGGAAACGAATCCCAGCGACTTTCTGGAGATGAGTGCGATGGTAGCGGAGGAGGACAGCGGTCTGCCGCAGCCCCCGCCGGGTCTGCACCAGGAGGCAGTCTTCCAGCACCGCAACGAACAGCACGAAGTCTACGTCTGCTCGCTCTGCAACAAGGCTTTCAGCTCTAAGGGACACCTCTCGCTTCACGCTCGTATCCACAATGGCGCCGGCGGCGACGTCATCGGCGAGAAGGTGCTCACCGACGATCACACCAGCTACAAGAGGCCCTACCAGTGCGATTTGTGCAACAAGTCCTATTCCACGGCTAAACATCGGTGGGGACACGTTTCGACCACGCATAGAGGTCACCCAGCAGTGACATGTAGTTTTTGCGCACGAATTTATTCAACGCGCTCGAATCTTGAGGAACATGTAAAATCACGTCACTCGAGCATGCCAGCCATGGCTGAGCAACAAATGCCGTACATACAGCCCGATACGCGGCATCAGTGTAAAACCTGCCCTAAGATGTATACCAACGTCACTGATCTCAACAAACATAGCAGAACATGTCTTATTGAACAACAGCGCAAAGGACACCAGTCTGGCAATTTGCAAAATTCTGGcaagaaaaatatgaattCTAAACTTAAAAACGCATTGGATCATTCATCAGACATATCCAGTTTGGATTCAGATAACGAGCAAAAAGACTACAAGAGCGCTGAGGCGAAGCTTGCCAAAAACCCGCAGTTAACCATTCTCAAGCAAGCCCTTATTAAAGGGGATTGCGTTAAGAAAGAATACGAGGAGAGACAAAAAATGTTGAGCAAACAAAAGAAGCAAGCCAGCATGATTAAGGGTATGGATGCGGACGGAAGGAAATGGTTCTGTGACGCATGTCCCCAGGGTTTCTCGAGCTGTGAAGAGCTCAAGGAACACGTAAAGTTACACGTTGCCGAAAAGCCTTACATTTGCATGCTATGCGAGAAGGACTTTGAGAGTAAGAACTCTCTAAGCAAGCATATTGTGACTTCACATGGCGTTGATCCTACGCCGCTGATTGAAAGTGATAAGTGTTTGAAGAAGAATGTGCAGCCTGGAAACTCGCAAATGCCTATGATTAAGCAGGAGAATCTTACCAAAGAAAATTCCGGGTCGCCATCCTCAAATTCACACTTGGAAAATGATGATGACATGCATGAAAACGGTAACGATAACGCGCTCGAGATAGAGACTGTTTTCGTATGTGAAATCTGTACGCGAGATTTCAACGATCGAGCATCGTTATGGCTGCACATCAGAGCCACTCACAAGGAATACGCTGCGTTCGCTTGCGGCATTTGCCTCAAAATCTGCTCTGATAATAAGCAATTACAAAATCATGTCAATTTATATCACGGTGGatcaaaactattaatttcGGAGCAGAGGAGGTATAGTTGCACGATATGCGGACGACAACACGATTCCAGAAAGAAACTCATCACTCACGTATCAATTCACAACGTGGATCCCGTCTTCGATCCTGCGAATTTTGTACAGTTAAATGCCAGTTACTGCAACGACAATGTTAATAGTAATGAAGGAAACGAGCTTCTCATGGAGGCCGACGATGACAGCGAAAGGGTGGACTGCTACATTTGCAACAAATCGTTCCCTAACGAAGATCATTTAATTAGACATCAGAGAAATGCTCACAGAAATGAACCCATGGGACAAATGGTGCAGATGGGCGAGTTCAGTGGAAATGGTGGTCCTGCAGGGCAAAATGGTACCGGCAATCGCGCTCAGTACCATCTTTTCTTCGTCTGCGAGCTCTGCGGTAGTTCACATCCTAGCAAGTGGGAACGTTGGTTGCACGTCAGCAGCGAACATGCTAATGAGTCTTTAATTAGGTGTGAACGTGATGATTGCGGCAAGATCTTTGCGACAAAAACTCTGAAAAATGAGCATGCACAACACCACCAGCTGCAAGGCATCTCGCCCAACACCTGCGAAATCTGCGGCAAGCTGTGGGGTAGCCGCGTCGACTACTGGAAGCATGTTATGGGTGTGCACTCGGATACGGTGCCACTGATTTGCGGTGTCTGTCTCAAGGTCTTCCCCAATGTACTACAACTTAGTCAACACGTCAAACTGAAGCATTGGCCTCTAACGAACGGTGACTTTAGCTGTGACATATGTGGCCGACCCTATTCCAACAAGAGCAAGATGTCAAGACACAGAAAAATCCACGGTTTGGACGGTGAGCCCTACAATCCGGCCACTACTAATAGTAGCCTCGTCATCAGCGATGCATCTACGAATGAAATGCCATGTCTTCCAATGCCTGTCCATTTAGATAATGGCTTACCGCAACCTATAGAAACAGGTAGCCTCGATCTGAGCTGCGAGATGTGCGGTGATATTAAATTTGGATGTCTCGAAGACCTCTCCAATCATCGCCGCGTGCACCACGGCCTCTTCCCTTGCGATTTATGCAACAAGTATTACGGACGCACTTCGCACCTTTGGAAGCATGTGAATCGTGTACACAAAGGTCACGAGGACGTCACCTGCCGCTATTGTCTTAAAACCAGCGCTTCGAGAGACCATTTGGCTGCACATATTGCAAAGATACATAGATACGAGCCAGACGTGAAAAACGATATGAGGGATGTAATAAGTTACAAAACAAGCTACAATCAGGCCGCcgctgcggctgcggctgctgctgcggctgctgcggcCGCCGAAGAGGATGACGGCCTGCACTTCTGCGAAAAGTGCAACAAGTCATTCCACAAGAGGTACCTTCTTAGACGCCATATGAAAGGCTGTCAGAACTATCGTAAAGATCCAAGTGCATTATTAACTCGCTGCAGAGCATGTGAGCGAATCTTCAAGGACCGCGCAAGTTTACAAAAGCACATAGAGAATCATCACAGCTCATACACGTGCCATTTGTGCAATGAGACAATCACTTCAAAACTCGGCATCATGACGCACAACCGCGTGCACCACATGCAGCACCCGGACCTAACCTGCGAGCTTGAAAACTGTCGCAAACTATTCAGGACAAAGGAGGACCTCGAGTCTCACCGCAAGGACCACAAACACCACGGCAGCCCGAACGTCTGCGATTTCTGCGGTGACACCGTTGAGAATAAGCTGAAGTTGAAGATGCACATTTTGAGTTTGCACAGAAATGAGATCGGAGTGTCCTGTGGTGTGTGTTTAATTCCGATGAAGGATCCCAAGGACCTTAAGAAGCACGTTGAAGATGTGCATGCGGGTATTCTATCAAAACCAAATACTTGCCAGGTCTGCGGTAAACAATACGCTTCGAAGTGGAAGGCGTTCGATCACACGAAAAAGTGCCACGGCAAAGTGTTCCGAACGTGCAAGCAGTGTCTTGCAGTTTTCACTTCGGACGAGCTCCTGCGCAATCATTACGAGCACACTCACAACATTCCTAAAGACCAGCTTGACGCTTATCAATATCGCCTTGAGGTCGCGGGCAGCAAGATAGATGACTACGACCTGGGCCCGCTCGAGGTTGTAGTAAAAGAGGAGCCGGAGGAGCTCGATTTCGATATGGAGCCGTTTGACGACAACTCAAGCGACTCGAAGAGGAAACGTGGCAGCAACGATACTTATGACTGCCAAATCTGCCCTGAAATCTTCCTCAATTACGAACTACTTTCGTCACATTATAGAAATGTGCATAATACTGATCCGGAGAGGATGCTTAAGAGGATTAAGCTAGAGGTAACGACTAGCAGTAGCAAAcccaaaaagaaaatgaggGATAGAGAAAATTACGAATGCAAAAACTGCCAGAAACAGTTTTGCACGAAGACACTGTACTTGGGCCACGTAAGCGTGTGCACGAGAAAATCCACTCCCATCATGCCGCCAACGTCAATTTTGGAAgcgcatttgaaaaataataatcagaTTAAGGAGGAACCCGAAGCAATCGTTTGCGAGACGAACCTTAACATTCCGGACTTTAATCTCTTCGAGGACATAAATATGCAACTTTCAGGCCAGAAACCAGTGCCGAGTCTAATGCCTCTTGGACACACGTCTAAATCTTCCAAATACTCGAGGAAAGACTCTAGAAAAGTATACGATGAGTCAACGAACACAGAATGCACCTGCGAGGTCTGCGGTAAGCAGTGGCCTGCCAAAAAGCACTTATGGCAGCATCTGATTCGTTTCCATCGTGCAGAGGCTGCTGTTACTTGTGGAGTATGCTTGAAACTCTGTGTTACTTACGAAGACCTGTCTGAGCATTTAAAGAATGTGCATCCTGCTATTCTTTCTACAGCGGGAAACAACTTCACTTGTAAAATTTGCGGCAGGTACCATAATGCTAGAAGCAAGCTTTTGCTACATATGAGCATTCATATTAATTGTAAGGGCAACCAAGTATGTCAGCGTTGCAATAGGACTTTTGAGAACGATGAAAAACTCAAGGAGCACTTTGCTACTTGCATGGTCACTAGAGGAGAACCTCAAGATGGTACAATTATTAAGGAGGAAGGAATGGACGAAACTGTGGAGAAGGGGAGCCTAATTGGCGACGATGAAGAGGATCCGGAGAACGAGTACGAGTCTGAAGAGAACTCTGAAAATGTTGGCAGCAGCTCGAAGTCGAATGATTCGGATAGCAGTAGTAGTGGTTCCAGCAACAGTTCGAGCGACGACGATGATAGCGACGATGATGAGGATGATGCAGCGTCGAGGAATATCGAAGAAGATAGTAGTAAAGACTCGGATAATGTTGAACAGATTACGCAAAGTCAAATAGAAGTTCCGAAACAAGAAATAATCGAGGAGAATGAAACGATGAGCCTTGGTGAGGAGGAAgacgaggaggaagaagagatGTCAGAGTCTGAGGAAGATCAGTACCTACAGCAAAAGCAAGCTCAACTTCAGCAAGCGCAGCACGAGCTCGAGGATCATTACGCAATGCcccaaaaagaagaaatgctTGTGAATTACTCGGACGATGAGGAAAATCCGGCCCTCAGCCCGATGCTCCCCGTTGCCATCAAAGAGTCCGAACAAAATGATCACAGTCAAGAAGAATTGGCCAGGCAACAAGCGATGAGTGAGAACAAAACCACTGACAGCGATGACGACAGCAGCGATGAGGTTGAAGAGGTCGATGACTCCGATGATGATGAGGTCCAGCAGGCTGAAGTTGTCGATCCAAACAGCGCCTTCCATGctgataataattcaaatagcAGCAATGAAGgCGAAGAAGTTGAAGAAGGTGAAGAAATCGAAGAAGAGCAAGAAGATCAAGAAGATCAAGAAGATCAAGAAGAACAAGAAGAACACGAAGAACACGAAGATCACGAAGAACACGAAGAACACGAAGAACACGAAGAACACGAAGAACAAGAAGAGCAAGTCGAATGCGAAGAACAAGAAATAGAAGAAGAACAAGAAGAGGAAGAACAAGAACAGGAGGAAGAAGGTGAAGGTGAAGTAGATGGAGAGGAACACGAGGAACATGAAATTCAGGAAGAACAAGAGTACGAAGAGCAAGAGGAACAGGAAGAAAACGAGGAACAGGAAGAACAAGAGGTTGAGGAAGCAGAAGTTCTTGAAGTAGACGAGAACGAAATGCACAATCTGAACGGCACCGTCTTGATGATTGCGAATGACGCGGACGGCAATCAAATTCTGATCGAGCGTAATATGGCTGATCTCGAGAACGACGATTCCGTCCATGACATGGCGCAGTATGTGTTCCAAGATGGCACAGGCTTCGCCCTCGAGGACTATGAAGCTATCGTCGAAAGTCAAGGcgatgaagaagaagagcaTCAAGGATTCGAAATGGAAATTGGCTCCTCCCAAGAGGAACAAATTGAAGAgcaagaggaggaggaagaatcCGAGCTCAGAGAAGAATTGGAAGAAGTTGAGGAACAAGAAGTCATGCATGAAGAAGAGGATGACGAGGAACAAGAACTCAGTTGCAGTGCCAAAAGCTAA
- Protein Sequence
- MENRERYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKITEDDRLPKCLCYRCMYNLENFYDFRTACVNAVSLLERCLPPKESKTEIKVEIQEEEPYSELRMELLKEKENMPMLIPEAPVVNPNAALGTPPRLRSDGEPDSEELKQDETMEDPDKSDEYEMDMETNPSDFLEMSAMVAEEDSGLPQPPPGLHQEAVFQHRNEQHEVYVCSLCNKAFSSKGHLSLHARIHNGAGGDVIGEKVLTDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCSFCARIYSTRSNLEEHVKSRHSSMPAMAEQQMPYIQPDTRHQCKTCPKMYTNVTDLNKHSRTCLIEQQRKGHQSGNLQNSGKKNMNSKLKNALDHSSDISSLDSDNEQKDYKSAEAKLAKNPQLTILKQALIKGDCVKKEYEERQKMLSKQKKQASMIKGMDADGRKWFCDACPQGFSSCEELKEHVKLHVAEKPYICMLCEKDFESKNSLSKHIVTSHGVDPTPLIESDKCLKKNVQPGNSQMPMIKQENLTKENSGSPSSNSHLENDDDMHENGNDNALEIETVFVCEICTRDFNDRASLWLHIRATHKEYAAFACGICLKICSDNKQLQNHVNLYHGGSKLLISEQRRYSCTICGRQHDSRKKLITHVSIHNVDPVFDPANFVQLNASYCNDNVNSNEGNELLMEADDDSERVDCYICNKSFPNEDHLIRHQRNAHRNEPMGQMVQMGEFSGNGGPAGQNGTGNRAQYHLFFVCELCGSSHPSKWERWLHVSSEHANESLIRCERDDCGKIFATKTLKNEHAQHHQLQGISPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVLQLSQHVKLKHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGEPYNPATTNSSLVISDASTNEMPCLPMPVHLDNGLPQPIETGSLDLSCEMCGDIKFGCLEDLSNHRRVHHGLFPCDLCNKYYGRTSHLWKHVNRVHKGHEDVTCRYCLKTSASRDHLAAHIAKIHRYEPDVKNDMRDVISYKTSYNQAAAAAAAAAAAAAAAEEDDGLHFCEKCNKSFHKRYLLRRHMKGCQNYRKDPSALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLGIMTHNRVHHMQHPDLTCELENCRKLFRTKEDLESHRKDHKHHGSPNVCDFCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEDVHAGILSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKQCLAVFTSDELLRNHYEHTHNIPKDQLDAYQYRLEVAGSKIDDYDLGPLEVVVKEEPEELDFDMEPFDDNSSDSKRKRGSNDTYDCQICPEIFLNYELLSSHYRNVHNTDPERMLKRIKLEVTTSSSKPKKKMRDRENYECKNCQKQFCTKTLYLGHVSVCTRKSTPIMPPTSILEAHLKNNNQIKEEPEAIVCETNLNIPDFNLFEDINMQLSGQKPVPSLMPLGHTSKSSKYSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCVTYEDLSEHLKNVHPAILSTAGNNFTCKICGRYHNARSKLLLHMSIHINCKGNQVCQRCNRTFENDEKLKEHFATCMVTRGEPQDGTIIKEEGMDETVEKGSLIGDDEEDPENEYESEENSENVGSSSKSNDSDSSSSGSSNSSSDDDDSDDDEDDAASRNIEEDSSKDSDNVEQITQSQIEVPKQEIIEENETMSLGEEEDEEEEEMSESEEDQYLQQKQAQLQQAQHELEDHYAMPQKEEMLVNYSDDEENPALSPMLPVAIKESEQNDHSQEELARQQAMSENKTTDSDDDSSDEVEEVDDSDDDEVQQAEVVDPNSAFHADNNSNSSNEGEEVEEGEEIEEEQEDQEDQEDQEEQEEHEEHEDHEEHEEHEEHEEHEEQEEQVECEEQEIEEEQEEEEQEQEEEGEGEVDGEEHEEHEIQEEQEYEEQEEQEENEEQEEQEVEEAEVLEVDENEMHNLNGTVLMIANDADGNQILIERNMADLENDDSVHDMAQYVFQDGTGFALEDYEAIVESQGDEEEEHQGFEMEIGSSQEEQIEEQEEEEESELREELEEVEEQEVMHEEEDDEEQELSCSAKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01113641;
- 90% Identity
- iTF_01113641;
- 80% Identity
- -