Olab006414.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ormyrus labotus
Gene Symbol
-
Assembly
GCA_035582975.1
Location
JAWWEO010000021.1:23174821-23184273[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 0.087 9.2 7.6 0.3 1 23 236 259 236 259 0.96
2 36 2.3e-06 0.00024 22.0 2.7 1 23 265 287 265 287 0.98
3 36 0.036 3.8 8.9 2.9 1 23 296 319 296 319 0.95
4 36 0.00029 0.03 15.4 2.7 1 23 325 347 325 347 0.98
5 36 0.002 0.21 12.8 2.4 1 23 352 374 352 374 0.97
6 36 0.00014 0.015 16.4 0.9 1 23 380 402 380 402 0.98
7 36 1.4e-06 0.00014 22.8 1.2 1 23 406 428 406 428 0.98
8 36 0.00058 0.061 14.5 0.1 1 23 434 456 434 456 0.95
9 36 0.00034 0.035 15.2 0.8 1 23 462 485 462 485 0.98
10 36 0.025 2.6 9.4 0.2 1 23 632 655 632 655 0.93
11 36 0.94 99 4.4 1.6 1 23 664 687 664 687 0.95
12 36 0.0075 0.79 11.0 0.8 1 23 729 752 729 752 0.97
13 36 0.017 1.8 9.9 3.3 2 23 766 787 765 787 0.96
14 36 4.1e-06 0.00044 21.2 2.8 1 23 797 819 797 819 0.98
15 36 0.0036 0.38 12.0 0.0 1 23 825 847 825 847 0.96
16 36 0.0016 0.17 13.1 0.3 1 23 853 876 853 876 0.97
17 36 0.083 8.7 7.7 6.0 3 23 1023 1044 1021 1044 0.97
18 36 3e-05 0.0032 18.5 3.3 1 23 1050 1072 1050 1072 0.97
19 36 0.39 41 5.6 6.6 1 23 1081 1104 1081 1104 0.94
20 36 0.0022 0.23 12.7 3.1 1 23 1110 1132 1110 1132 0.96
21 36 0.00017 0.018 16.2 1.2 1 23 1137 1160 1137 1160 0.96
22 36 0.081 8.5 7.7 2.3 1 23 1166 1188 1166 1188 0.98
23 36 0.0033 0.35 12.1 4.4 1 23 1192 1215 1192 1215 0.96
24 36 0.012 1.2 10.4 0.3 3 23 1223 1243 1222 1243 0.98
25 36 0.00025 0.027 15.6 1.3 1 23 1249 1272 1249 1272 0.95
26 36 0.0015 0.16 13.2 0.2 2 23 1384 1405 1383 1405 0.97
27 36 0.11 11 7.4 0.7 1 21 1453 1473 1453 1476 0.89
28 36 0.061 6.4 8.1 6.9 1 23 1581 1603 1581 1603 0.99
29 36 0.0042 0.44 11.8 1.4 1 23 1622 1645 1622 1645 0.97
30 36 0.09 9.5 7.6 1.3 1 23 1661 1684 1661 1684 0.96
31 36 7.9e-05 0.0083 17.2 1.3 1 23 1690 1713 1690 1713 0.95
32 36 0.0021 0.22 12.7 0.7 3 23 1720 1741 1718 1741 0.93
33 36 0.003 0.32 12.2 0.4 1 23 1746 1769 1746 1769 0.97
34 36 1.1e-07 1.1e-05 26.2 0.8 2 23 1776 1797 1776 1797 0.97
35 36 3e-05 0.0032 18.5 1.5 1 23 1803 1825 1803 1825 0.97
36 36 1.7e-06 0.00018 22.5 0.1 1 23 1831 1853 1831 1853 0.98

Sequence Information

Coding Sequence
atgtgttcaaaatttaaagaaaaccaCACATCAAAAAATAGTACGATACAGACTATCTCTGTACATGGACCGGCCGGGCAAATAATCTACATCAAGATAAATGATACGGTCATTTTACCAGAAGTGATAACAATACCTGTACCTGTACGAACGCAACAATCAATACCACAACAAACAAAATCGATGATATTGCCAAGTAAGCAACAACAACTTCTAGTTCTGCAGCAACCGAATCAACAATCACAGCAGCCGCTTCTGGTATTACAACAACCTGATGAAGAAGATCAGGTATTACTATTACAGAAGCCTGCAGTTTATTCTCAACCGCAGCGAACGCAGAATGTGATTGTACGAACACCTTCGGTGCAGAGAAATCAAGCTAGTCCGagtgaatttcaaaatcagcAGTCACAAGATGACTTGCCTATACAAGTATCAGTGCCAAAGAAGGTTCACACAAACGAACCTAAAGATTCAGAAGTAGCGATAGAAGAACAGATAACTCAGCCAGAAATAATTGCAAACAGCCCAGAGCAATAtgcaaatttgcaaaatactttaaaaacgaaaccaaaattagaaatattaagcATAAATATTCCCTCGACGTCGACTCAAGAAAATTACGAAGAAGACTCCCCAAGCGAAGATTCCAAAGACGAGGAAGATACGAAAGAGATTTTTACGCGAAATGACGCTGGTTATTACCAATGCAACATCTGCCAATTAATGCGAGTCGATCGCCGCAGTATGTTATCGCACATTTCTGTCCAGCATAGTATCCTGAGGCCCTTCAAGTGTTCCATCTGTCTCAAATCGTTCAAACGCAAATCTACGCTAAGAGTCCATCAACTGTCGCACAATCTGGAGCATCCGGTGGTGCTGTTCCCTTGCACCAAGTGCGATTACCGGACTCCCAACAAAGTGACCCTTCGGTATCACCATTATAGGGTGCACACAAACGAGTACCGTTTCACTTGCGAGCATTGTAGTAAGCAGTTCAAGATGAAACGCGAATTAGCCGATCACCTCGAGACGCACAACGGCGCTCAACACATGTGCGATATTTGTGGAAAACTTTATAGAGGCGAACATCTTCTGAGAGCTCACCGAAGAAATCACTTGAATCTGTACAAGTTTCAATGCGTTGTATGCAAAAAGAAACTGTCTACagaagaaagtttaaataatcaCATGAAACTGCATAGCAGGACGTACGAGTGCGACGAGTGCGGCATGAAGTTTCCCAATAAACACAATCTCATCAAACACAGAAACGTGCACACGAGGGAGCAAGCGTTTCCATGCCCACAATGCGGCAAGGTTTTTGCCGATCAACCTACTCAGAAAGTTCATTCGTTGATTCATGCTGGATTGAAACCGTACAGATGTAATGTATGCGGACGTGGATTCACGCAGAGAACTCCGATGATGCTGCACTGGAGAAAGAAACATCCTGGAGAAACCGAACCTCCGCCTCcggttattttgaaaaatattctgaaaagCATTGAAGAGCAGAATCAACAAAGAAAACAATCTACAGAACAGGAACCGTTGGCATCCATCGACCTCACAACGGACGACGACCCCAACAAGGAATCGACAAACCCTTGTAAGTCTCCCGCAAAGAAACGTTCAGCCGAATCTCTCGAAACTCCCGCTACCTTTAGAAAGTACTTCCTCCGTGACGCGACAAACGATAAGGCCGATAGCGGTGACGAGTCCGACGAAGACAAGGAAGATCTGATATCAAAGCTCTGCGTCTACAAGCAACTGTCGGACGGCAGTTATTCCTGCGAGCTCTGCAACGCAAAGGGCGTGAAAGTGATCACAGAACAAAAGACGCCGATTGTACGTCATCTCCTAAGGGCGCACACTTACCACCATGGCTACGAGTGCTCCAACTGTCCGGACACGTTTAGAAAAGAGAATTGGCTTAAAAACCACACTGTCATAGCGCATCCGGAGCAGGACAGCAGCAAGTTCTTCGAGTGTGCCAGATGCAAGCATAAGAGCAAGGACGAGGAGCTGCTCAGGCTTCACGCATTGAGGAGGCATGCGGCATTGTTCAGGTATGCGTGCAAGTGCTGCGCCAAATGCTTTAAGACCTGGAAAGCCAAGTACGAGCACGAGAGATTCATGGAGAGAGGAAAGAAGAAGTCTAACAGACCCAAGCCGAGGTATGTCTGCAATAAGTGCAGCGTTATCTCCAAGACCAAGGCTGAATTCGTGAAGCATCTCAAGAGTACTCACTCTGTagacttttacaaaaatGGTCCAAGAATACTATGTAACTGCAAGCAATGCAACAAAGTCTTCCTGTCGCGCAAGCTGCTCCGCGAGCACTTGGCTACACACGAGATCATAGAAAACGACGAGACGGGCTACAGTTGCAAAGAATGCGGCAAACGGCTATCCAGCAAAGATCACTTGAAAAAGCACGGACGCGTGCATACCGGCGAGCGGCCCTACGCCTGTCCTGAATGTGGCCAGGCCTTTGCTCTGCGCACGACAATGAGGATCCACGCGCTTTCTCATCGCGGCATCAAACCCTACGTTTGCAGGCTCTGCAATCTCGGCTACTCGCAGAGGTCCGCGCTGATGATCCATTGGAAGAGCAAACACAAAAATCTACCGCCCCCTCCGCCCATCGAGATACACCAGTTCTTCGATGCCAAGGGCAGACTCGTCATTCCTTGTAAgaaaaataCGCGCTGGTCGAGAAAACAGAGTATCATCTCTCGAATAAGAGTACGAACATCTTTGGAATTGACAGACTCGAATTCACTTGAAGAAACAGTCAGCAAATCGACCGTTAAAAATATGCCGAAAAAATCTGCAGCATTAATTtccaaaaggaaaaaatcagttccttcaaaaattttccaggATGATAATGTTATTGAGCAAGGAAAAAAGGTCTCAGTCATTGAACATTCTTCGAAAATTGCAAGGTTGGAATATACACCTTCTATTTCGCAAGCACAAGAAAATCCTGCGAAAGTCAAGAAAGAACCCACTGAGCCTCTGCtctataaaaaacttaaagctGGTGGTTTTGGCTGTAAAGTCTGTCATCAAAAATACACTCATCGTTACAAAGTCAAGCAGCACATCAAAATGAAGCACGCACCAAGAGAAGTCTTCAAGTGTTCTGATTGTTCTAAAACCTTTAAATCTAAGTATCAATTTAATGTACATGCAAACCAACATCGTGAAAACTGCAACGATTATTTGTTCTGTTGCGATAAGTGTGATTACCGAGCGAAATCGAAACATTATCTAAAGACTCACGAAATAAGAAAACATACAAACGAGTATAATTTCGAGTGCGATCATTGTGGAAAGCGTTTCAAAATGAAGATGGATCTAAAATTTCATCTGGGTACTCATGGAACCTCGCAGCATATGTGCGATGCTTGCGGTCGTATGTATACAAGTCAAGACTCACTCTACAAGCATCGTCGAGTGGTTCACTTAAATGATTACAAATTCCAATGCGAAATCTGCCATCAGAAACTGCTTACGCAAGAAACGTTCAACAGCCACATGGAGTCGCACAAAAACCTTCACAGCTGCGATGAATGCGATCTCAAATTCACGAAAAAGTATTACGTCACGAGGCACAAGAAGCGTGTGCACAAAGTTGAAAAGACAAAACTCTGTCCGGTTTGCGGCAAAGCGTTTGTGTGCATGGCTACTCTGAGGGTACACTACCTCACACATGCAAAAGTCAAACCATATCTGTGCAACGTCTGTGGCTTTAGCTTCACGCAACGATCCTCGATGATGTTGCATTGGAAAAGGAAACATCCCGACGCCGAGGATCCACCTCCACCGGTGatacttacaaattttttcgatgCCATACAATCCGAAGTCAACAAAATGGTGGAAAACCGTAACGAGTACAATAATACTTCAAACGAGACTCATCAGTACATTGTTCCGGATTCGGACATCGAGTGCACGATCGACAGCAGCGGTAAAACTGTCAAGACTATCGTCACGCCGAAACAACCAGCATCGTCAATGAGAATATATCAAATTTCCTACGTCAATGGCAAGACTTCATACTCATTGTTACCTATCAAACAGAAAGTCACAAAATCTGCGCCAGAAGTTCATCTAAACGAGCAAAATTTGACCTGCGAAGAATGTGGTTTAAAGTTTGCCACAGATGTTCGTCTTAAATGGCACCAATCGACCCACAATCCGCTcaagaattgtaaaaattttagaagacAAGCTAAGATTATGAAACAGCAGGATGATCCACTGGGGGAGAaggtggaaaaaaaagttaccgaCAAATGTGAAGAGCAGTTGAAAGAGGGGAAGAAAAATCTGATCTACATCTGTCCCTCTTGCGATTTCAGAACTACCAATCGCAGTACGATGATCAATCATTTCACTGGTACGCATTACTTCCAAACTAAGGATCAGTCTCACGATGCGGAAGAAGTGGAGCTGCTTCAGCAACCAAAAATGGAAATCGATGAAGAGAATCATGAAATCGTCGAAGAAAAGGTAGAAACGCTAGAGATAACATGTGCCCAATGTGGGTTTTCAAGCTTCAATCAGGACGATATCGACTTCCATACGTGTCACGATCCGGAACAGTCGCAAATGTTCTCTTGCCATTTATGCACTTACGAGTGTTTAACTCGCATGGGATTGCAGAGCCATATTACCCGCAAACACAAGCCCAAAGCCGAAACTGGACAGCCAAGGGTCTTCCAATGCGACTTCTGCGAGTTTAAGTGCTCAAACAAGAACACGTTGTATTCGCACAGACGTAAACATCGCAGGGATGACGATAAACCGGTGACAGAAGGTGAAGCTGAGCTCGATTGTAGCTATTTTTGCAACGAGTGCGATTTTTCCACGAAGAAGAAAGGAGCCCTTTATTTGCACATTCAAAGGCGGCATAAAAGTGCGGAGGAGAAGCAGCAAGTACCTTCTCGGCCAGAATACTACAGTTGCGATCAGTGCGATTataccaataaaaataaatacgagaTGAAGGTACACGTAATTAGAAAGCACACGAACGAGTACAATCACGAATGCGAAATCTGCGGTAAAAAGTACAAGATCCGTGGCGATCTTACGAATCACATCAGGTTCCAGCACAGGGAGCAGCCGATCAtctgcgatgtttgcggtaaaaccTGCGGCAACAGCAACTCACTTTACGTACACCAAAAGTTCGCTCACTACAAGGCTGAATTCGAGTGTCCGATCTGTCATCGGCGAATGGTCAGTCAGGCCAACCTGGATGAGCATATCCTAAAGCAGCACGAACAACGAGAGGACGCCGTCTGCGAGGAGTGCGGCAAGACCTTCACGAGGCAAAGTCGACTGAAAATTCACATGAGAATTCACACAGGTGTTAAACCGCATAGTTGTAAAATCTGCGCAAAGGCTTTCACCAGAAAGACGGCTCTCAGGCAGCATTTGCTCATTCACACAGGTCAGAGACCCTACGTATGCGACATATGTGGAAAAGCCTTCACTCAGAAACCAGGACTGATCAGCCATAGGAAAAGCCATCCAGGCTCGCATCCACCTTTGCCAAGGGTTACGATCGATCACGTGCTCTCAGAACTGCTTACAGAGGAGAGTTGA
Protein Sequence
MCSKFKENHTSKNSTIQTISVHGPAGQIIYIKINDTVILPEVITIPVPVRTQQSIPQQTKSMILPSKQQQLLVLQQPNQQSQQPLLVLQQPDEEDQVLLLQKPAVYSQPQRTQNVIVRTPSVQRNQASPSEFQNQQSQDDLPIQVSVPKKVHTNEPKDSEVAIEEQITQPEIIANSPEQYANLQNTLKTKPKLEILSINIPSTSTQENYEEDSPSEDSKDEEDTKEIFTRNDAGYYQCNICQLMRVDRRSMLSHISVQHSILRPFKCSICLKSFKRKSTLRVHQLSHNLEHPVVLFPCTKCDYRTPNKVTLRYHHYRVHTNEYRFTCEHCSKQFKMKRELADHLETHNGAQHMCDICGKLYRGEHLLRAHRRNHLNLYKFQCVVCKKKLSTEESLNNHMKLHSRTYECDECGMKFPNKHNLIKHRNVHTREQAFPCPQCGKVFADQPTQKVHSLIHAGLKPYRCNVCGRGFTQRTPMMLHWRKKHPGETEPPPPVILKNILKSIEEQNQQRKQSTEQEPLASIDLTTDDDPNKESTNPCKSPAKKRSAESLETPATFRKYFLRDATNDKADSGDESDEDKEDLISKLCVYKQLSDGSYSCELCNAKGVKVITEQKTPIVRHLLRAHTYHHGYECSNCPDTFRKENWLKNHTVIAHPEQDSSKFFECARCKHKSKDEELLRLHALRRHAALFRYACKCCAKCFKTWKAKYEHERFMERGKKKSNRPKPRYVCNKCSVISKTKAEFVKHLKSTHSVDFYKNGPRILCNCKQCNKVFLSRKLLREHLATHEIIENDETGYSCKECGKRLSSKDHLKKHGRVHTGERPYACPECGQAFALRTTMRIHALSHRGIKPYVCRLCNLGYSQRSALMIHWKSKHKNLPPPPPIEIHQFFDAKGRLVIPCKKNTRWSRKQSIISRIRVRTSLELTDSNSLEETVSKSTVKNMPKKSAALISKRKKSVPSKIFQDDNVIEQGKKVSVIEHSSKIARLEYTPSISQAQENPAKVKKEPTEPLLYKKLKAGGFGCKVCHQKYTHRYKVKQHIKMKHAPREVFKCSDCSKTFKSKYQFNVHANQHRENCNDYLFCCDKCDYRAKSKHYLKTHEIRKHTNEYNFECDHCGKRFKMKMDLKFHLGTHGTSQHMCDACGRMYTSQDSLYKHRRVVHLNDYKFQCEICHQKLLTQETFNSHMESHKNLHSCDECDLKFTKKYYVTRHKKRVHKVEKTKLCPVCGKAFVCMATLRVHYLTHAKVKPYLCNVCGFSFTQRSSMMLHWKRKHPDAEDPPPPVILTNFFDAIQSEVNKMVENRNEYNNTSNETHQYIVPDSDIECTIDSSGKTVKTIVTPKQPASSMRIYQISYVNGKTSYSLLPIKQKVTKSAPEVHLNEQNLTCEECGLKFATDVRLKWHQSTHNPLKNCKNFRRQAKIMKQQDDPLGEKVEKKVTDKCEEQLKEGKKNLIYICPSCDFRTTNRSTMINHFTGTHYFQTKDQSHDAEEVELLQQPKMEIDEENHEIVEEKVETLEITCAQCGFSSFNQDDIDFHTCHDPEQSQMFSCHLCTYECLTRMGLQSHITRKHKPKAETGQPRVFQCDFCEFKCSNKNTLYSHRRKHRRDDDKPVTEGEAELDCSYFCNECDFSTKKKGALYLHIQRRHKSAEEKQQVPSRPEYYSCDQCDYTNKNKYEMKVHVIRKHTNEYNHECEICGKKYKIRGDLTNHIRFQHREQPIICDVCGKTCGNSNSLYVHQKFAHYKAEFECPICHRRMVSQANLDEHILKQHEQREDAVCEECGKTFTRQSRLKIHMRIHTGVKPHSCKICAKAFTRKTALRQHLLIHTGQRPYVCDICGKAFTQKPGLISHRKSHPGSHPPLPRVTIDHVLSELLTEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-