Olab009282.3
Basic Information
- Insect
- Ormyrus labotus
- Gene Symbol
- ZNF236
- Assembly
- GCA_035582975.1
- Location
- JAWWEO010000045.1:6170927-6183683[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 8e-05 0.0084 17.2 1.2 2 23 175 196 174 196 0.95 2 27 0.00014 0.014 16.5 0.5 1 23 202 224 202 224 0.98 3 27 2.8e-06 0.00029 21.8 0.9 2 23 230 251 230 251 0.98 4 27 0.0002 0.021 15.9 0.1 2 23 258 279 257 279 0.96 5 27 0.00076 0.08 14.1 4.3 2 23 290 311 290 311 0.97 6 27 2.2e-06 0.00023 22.1 0.4 1 23 332 354 332 354 0.99 7 27 1.9e-06 0.0002 22.3 1.2 1 23 360 382 360 382 0.96 8 27 3.2e-05 0.0033 18.5 0.5 1 23 388 411 388 411 0.97 9 27 0.085 8.9 7.7 5.7 1 23 420 443 420 443 0.98 10 27 6.6e-08 6.9e-06 26.9 0.5 1 23 549 571 549 571 0.98 11 27 8.5e-05 0.0089 17.1 2.7 1 23 577 599 577 599 0.99 12 27 9.6 1e+03 1.2 2.0 6 23 608 625 608 626 0.93 13 27 0.0017 0.18 13.0 1.0 2 23 628 649 627 649 0.93 14 27 0.0014 0.14 13.3 4.6 1 23 717 739 717 739 0.98 15 27 2.3e-07 2.5e-05 25.2 2.2 1 23 745 767 745 767 0.98 16 27 0.00015 0.015 16.4 2.5 1 23 773 795 773 795 0.98 17 27 8.9e-05 0.0093 17.1 5.2 1 23 801 823 801 823 0.98 18 27 3.2 3.3e+02 2.7 1.3 2 23 1097 1118 1096 1118 0.80 19 27 4.9e-06 0.00052 21.0 1.8 1 23 1124 1146 1124 1146 0.99 20 27 0.00054 0.057 14.6 2.2 1 23 1152 1174 1152 1174 0.97 21 27 1.3e-06 0.00013 22.9 2.0 2 23 1208 1229 1207 1229 0.98 22 27 0.0034 0.36 12.1 2.1 1 23 1235 1257 1235 1257 0.99 23 27 1.5e-05 0.0015 19.5 0.8 1 23 1263 1285 1263 1285 0.98 24 27 0.0025 0.26 12.5 4.1 1 23 1291 1313 1291 1313 0.98 25 27 3.6e-06 0.00038 21.4 1.4 3 23 1517 1537 1516 1537 0.98 26 27 1.4e-05 0.0015 19.6 4.4 1 23 1543 1565 1543 1565 0.97 27 27 3e-07 3.1e-05 24.8 2.0 1 23 1571 1594 1571 1594 0.98
Sequence Information
- Coding Sequence
- ATGGACTCTTCTCTATTAATGGATTTAATGCTCACTGATGATGGTAACACATTATTGGCTTTACGTCaaGCAGAAGATGGGAGCTTGGAATTACTTTCAACTCCGGTAACGATTGtacaaaatgtacaaaatgtacCTGACAATTCTCTTCAAATTCTTAATACTCCAAACTGTGATGATATTTTGTGTCaaaataaagtaAACTACATAGGTCCTAATAAAAATCCACCTAATTTAACTAATGCCCAGCACATacttaatcaaaaaaattaccatccACCTGATATTACAAATAATGCAATCCAAAAAGTTCCTTTACAAAATTGCACAAATgttcaaaataatacaaaagaaacATCACCAGTTCAAGAAGAAACGTCTTCAAAAACATTACAAGTATCTGTTTCCTCTAAAGAAGTACCTAACAGTATTCAAAAAAGTTCTCAGAAAAAATCTGCTCGTAAGGATCTTGAGAAACTAAAGCAAAGGAAAAAGATTAAAGATAAAgagcagATATTTCTTAAATGTGATATTTGTGGTGAAGAATTTAACAAACaatatttgttacaaaaacATTTGCATGATCATGCTCAAGAAAAACCTTATCATTGTCCAAAATGTCCTGCATCTTTCAATGTGCCAACTAATTTCAGTTTGCATATGGCGACGCATTGCATTGGTGAACCAAAGTGTCCGAAATGTGGGCGAAAGTTTGCGCGAATGGCCAGTCTGAAGTCGCACATGTTAACTCACGAAGTAGATGAGAATCTCTACTGTACTGACTGTGATGCTGTTTTCCAATCAAAGGTCCAGCTCGAGGCTCATTTGAAGCTGCACAACGAAAAATGGTCGTCCGACGAGTACCGGAAGTGCAAGCTCTGCCACAAACAGTTCACCCAGTCTGGCCTTTACCGGCAGCACTTGCGGGATCATTACAAACTACAGACCAAGACGGTGAAGCAGACGAATCGGGGCATCAGGCACAGAACTCAGTACAAATGCAAGATCTGCATGAAGGTGTTCGAGAAGCCGAGTCAGTTGGCGCGACACATTCGGGTTCACACGGGGGAGAAACCGTATAAGTGCAATCTGTGCAATCGAAGCTTTACACAAAAGGGTTCGTTAAGAATTCATATGGGGCAACACAATGGACTCAGGCCGTACAGCTGCTCGTATTGCCAAGCTAAATTTAGTCAGAAAGGAAACCTCAATGGACACATTCTTAGAGTTCACAAAGTGCAAAGAGGTGTACCGATGTATCAGTGCACGCAATGTCCGTGCATTTTTAAGAAGCTGGGCAGCTTAAACTGCCATATGAAGCGGTCACACAACGTCGACGGGAAGAATTCAAACATGGAGGCCGAATCGGAAGCTGAAGAGCTTGTCGAAGAGGAATGCAAAGCGAATTCTGAAGCCAATCAGAATGAAGTCGAGAGTTCCGAGAAAGGATCGAACGAAGCTAAAACTTCCCAGATCGTTCCGAACGAAACTTCGGAACAGCCTTCGGATACTTTTGAGGATGGTTTCATTTTGTTGAATGACACCGATCAGACTGCGGTCGTTACTTTGCTGGACAAATCGACTAACGACGACAAGGggAAGTACGTAAGAATTAAGCAAcgctttgtaaataattgtagaGTTTATGTATGTTCCTACtgtgataaaatatttaaaaaaccttCGGATCTTATAAGGCACCTGCGAATACACACGCAAGAGAAACCGTTCCAGtgtTCTGTGTGTAGTAAATCATTTACGTTAAAATCAACAATGCAGACTCACGAAAAAACTCATAAAGAGGTCAAGAAGTTTTCGTGCTGTTCAATATCTTTCATTTCCAAACTCAAACTCCGAACTCATGAAAAATTCCATCATAATAAATGTTCtatttgtgataaaaaatttcaatcttttGATGAGCTTAAGAGTCATTCAGTAATTCATGGAGTGcgtgaaagaaataaaagtgaaagaaataaaagtgagAAGTCGAGAAAGCGGAAAATTTCTTGTGAACCTGCGGTGCAGAATTTGGCAAAAAACATCGTATTGAAAGAACCTCTAGTTTTAACTGAAGCTAGTAATGGATTACTCCATGTTCAACCCAAGTTTCGCAACGAGATTGCCCACGGTAAGGGCAGACCGCACAAGTGTTTCAACTGCCCTGCGGCTTTCATGAAGCTCAGTCATCTCAAACAGCATCAGCGTATGCATACGGGTGAAAAACCGTTCGTTTGTAATACCTGTGATAGgaCATTTTCCACGAATAGTACCCTAAAGACTCACGTTCGAACGCACGATTCAGCAAAACCTTACGAGTGTTCAATTTgcaaactaaatttttcaactttaagtAGTATGAAAAGACATCGTTTTACACACAGCAATAAACGACCTTACATGTGTCCgtattgtaataaaacttttaaaacgacggttaattgtaaaaaacacatgaaaattcataaagagGAACTAGCTCAACagcaactAGAACGTCAAAAAAATCAGCAAGAGCCttcaactttaaataaacaagaagTCGTAGCAGTATCAGAAACAATTCCTAACACAAAACCTTCAACAAAACCAGTATTACAATCAAAACCAATcgatattactaaaaatttaaatgagcaCCTTCAGACTATggtagaaaataatgaaaaatctgcATTTTGTGTTTCTGCTTCATTAGAAAACTCTTATGTGTTAGAACAAACTTTACCGGTAACCACCAATTCTTTCACAAGTGTAACCCAAACGTATAATGCTGATGCTACAGGAATGGTTACTATACCGGATTGTGCTGCTGATCAAACATTTACAGCCGAGAATATTAAAGAACTTGAAGAGACCTTAAatcaacaattattaaatattggcATGAATTTAAGATTAAACAATTGCAATAATGTAGTTTTCGAAAATGGAGATCAACCAGTTTTGAGCATAATTTATGACAATGCAAAAACCTTGACATCACCTATGGATACAAATATGTTTAATTCTcaattagataattttgatCCAATTTCAATAcagAATGAGAATATAATTGACTTAGGACCTGTGCAGACTAATTTGACAAATGTAGCTGGTATTTTATCTGAACcaattcaaataaatcaaCACAACATCACACAATGGATCAACTACGATCATGAAATGCAAATAGcacaaaatcaattaaataagcAAAACTATAATGATCCTTTAATGTCCGAATTGAAAACTATcataattaaagataattacgaaaatataaacaatgaaaGTAATCTTCAGTGTCACGTGTgcaatatacaaaatttgaatgtagacgatttaaaaaaccatttaaaaacgCATCAAGTTAACAgagaatttaaatgtaaatattgtgaCTCAAAGTTTTCCACTAGCGGGGATCTTAgtaaacatattaaaattcatgaaagtcAAGAaACTCATAAATGTTACGAATGCAACGAAGTATTTCGAACAACACTGCAATTAAGGGAACATATTAAAGAACACGTAAAACgtgaattaaaacttaaaaatgaagCAGGAAGTgacgaaattattttagatattgaATCAAAACATAACGAAACTGGTAAAAAGAAGAGTAacaaatgcaatttttgtCCAAAAACTTTCCGAAAACCTAGTGATCTCGTCAGACATACTAGAACACATACTGGAGAGAGACCTTATCAGTGTGAGTTCTGCGTTAAAAGTTTTGCTGTTAAATGTACTCTAGATTCCCATTTAAAAGTGCACAACGgtgaaaaatcatttacttGCAATTTGTGTAATAGCATGTTCGCAACAAAAGGTAGCCTTAAAGTTCACATGCGATTGCATACAGGTTCGAAACCATTTAAATGTTCAATGTGTGACATGAGATTCCGTACTTCAGGCCATCGAAAAGTTCACTTTATTACTCATATGCGGGAACGATCATCAACATCTCGAAAATCTAATAAGCAGTCGCCTATATCAGCCTTGAAAATGAACGttgaaaaagcaaacaatGATAAATCTGAACAAGACGTTGAAATTGCCCATACAGAAACTGCACCTCAACAACTTGTTGATGCCAAtgataagaattttaataccaTAACTATCAATTCGATTTCTGatcaaattgtatataatatgGATGGTACAATAATCAACGATTCTGCAGAAGTCTTAACCTTAGATGAAAACAATCAATTGGTTgcaaatttagaatttttgttagCAAATGGCTTAGTTACAATACAGACGGAGAATTCTTCGTTAGAACCGCACTTGACTGAGTCCGCGGATGCAGTAGGAGAGAACTTCATTTCGACAAACCTCGAACAAAAAATCGAccaacaaataattattccaGAAATTATTCGTACGGAAATTTCGAATGAAACACTTGCTGTTGCTAATGATGGTAATTTCCAGGGGGACAACCCTGTGGCTTTGCAATTGCAAAATGTAGATTCAACGGTGTCTGATAATCAAGATGAAGTCAGTTCAAAAAATGCCAAATCTCCGGGTGTTGCAAAACGTGATTGTGACATTTGTGGTAAAGCATTTAAGAAACCCTGCCAAGTCGAACGTCACATGCGCACGCACACAGGCGAGCGACCTTTTAAGTGCAAGATGTGTGATAAGTCATTTGCTCAAAAATCAACTCTACAGATGCACGAGAAGCATCACACTGGTGATCGGCCGTATACTTGTTCTCAGTgcaataaatcattttctcaAAGCGGCAACTTACGGACACATTTAAAACGAGTGCACAAACTTAATCTAACCAATAGTAAAGGGCTTTCTAAGAAtaaacaatttgtaaattacgATCCTCAGCTGTTACAACAAAGTATTGAAGAAACTAAAGTGCTTAATTTTGACGATATTTCTATCGTAGGGTTATTggagtaa
- Protein Sequence
- MDSSLLMDLMLTDDGNTLLALRQAEDGSLELLSTPVTIVQNVQNVPDNSLQILNTPNCDDILCQNKVNYIGPNKNPPNLTNAQHILNQKNYHPPDITNNAIQKVPLQNCTNVQNNTKETSPVQEETSSKTLQVSVSSKEVPNSIQKSSQKKSARKDLEKLKQRKKIKDKEQIFLKCDICGEEFNKQYLLQKHLHDHAQEKPYHCPKCPASFNVPTNFSLHMATHCIGEPKCPKCGRKFARMASLKSHMLTHEVDENLYCTDCDAVFQSKVQLEAHLKLHNEKWSSDEYRKCKLCHKQFTQSGLYRQHLRDHYKLQTKTVKQTNRGIRHRTQYKCKICMKVFEKPSQLARHIRVHTGEKPYKCNLCNRSFTQKGSLRIHMGQHNGLRPYSCSYCQAKFSQKGNLNGHILRVHKVQRGVPMYQCTQCPCIFKKLGSLNCHMKRSHNVDGKNSNMEAESEAEELVEEECKANSEANQNEVESSEKGSNEAKTSQIVPNETSEQPSDTFEDGFILLNDTDQTAVVTLLDKSTNDDKGKYVRIKQRFVNNCRVYVCSYCDKIFKKPSDLIRHLRIHTQEKPFQCSVCSKSFTLKSTMQTHEKTHKEVKKFSCCSISFISKLKLRTHEKFHHNKCSICDKKFQSFDELKSHSVIHGVRERNKSERNKSEKSRKRKISCEPAVQNLAKNIVLKEPLVLTEASNGLLHVQPKFRNEIAHGKGRPHKCFNCPAAFMKLSHLKQHQRMHTGEKPFVCNTCDRTFSTNSTLKTHVRTHDSAKPYECSICKLNFSTLSSMKRHRFTHSNKRPYMCPYCNKTFKTTVNCKKHMKIHKEELAQQQLERQKNQQEPSTLNKQEVVAVSETIPNTKPSTKPVLQSKPIDITKNLNEHLQTMVENNEKSAFCVSASLENSYVLEQTLPVTTNSFTSVTQTYNADATGMVTIPDCAADQTFTAENIKELEETLNQQLLNIGMNLRLNNCNNVVFENGDQPVLSIIYDNAKTLTSPMDTNMFNSQLDNFDPISIQNENIIDLGPVQTNLTNVAGILSEPIQINQHNITQWINYDHEMQIAQNQLNKQNYNDPLMSELKTIIIKDNYENINNESNLQCHVCNIQNLNVDDLKNHLKTHQVNREFKCKYCDSKFSTSGDLSKHIKIHESQETHKCYECNEVFRTTLQLREHIKEHVKRELKLKNEAGSDEIILDIESKHNETGKKKSNKCNFCPKTFRKPSDLVRHTRTHTGERPYQCEFCVKSFAVKCTLDSHLKVHNGEKSFTCNLCNSMFATKGSLKVHMRLHTGSKPFKCSMCDMRFRTSGHRKVHFITHMRERSSTSRKSNKQSPISALKMNVEKANNDKSEQDVEIAHTETAPQQLVDANDKNFNTITINSISDQIVYNMDGTIINDSAEVLTLDENNQLVANLEFLLANGLVTIQTENSSLEPHLTESADAVGENFISTNLEQKIDQQIIIPEIIRTEISNETLAVANDGNFQGDNPVALQLQNVDSTVSDNQDEVSSKNAKSPGVAKRDCDICGKAFKKPCQVERHMRTHTGERPFKCKMCDKSFAQKSTLQMHEKHHTGDRPYTCSQCNKSFSQSGNLRTHLKRVHKLNLTNSKGLSKNKQFVNYDPQLLQQSIEETKVLNFDDISIVGLLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01112022; iTF_01112850; iTF_01111194; iTF_01113628;
- 90% Identity
- iTF_01112850; iTF_01112022; iTF_01111194; iTF_01113628;
- 80% Identity
- -