Olab006416.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ormyrus labotus
Gene Symbol
-
Assembly
GCA_035582975.1
Location
JAWWEO010000021.1:23188441-23202425[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 38 0.016 1.6 10.0 2.9 1 23 88 111 88 111 0.97
2 38 0.2 21 6.5 3.5 1 23 394 417 394 417 0.97
3 38 0.00042 0.044 14.9 1.1 1 23 449 472 449 472 0.96
4 38 1.2 1.2e+02 4.1 1.1 1 23 487 510 487 510 0.96
5 38 2.2e-05 0.0023 19.0 3.2 1 23 516 539 516 539 0.96
6 38 0.0018 0.19 12.9 4.1 2 23 545 567 544 567 0.96
7 38 0.009 0.94 10.7 0.4 1 23 572 595 572 595 0.97
8 38 1e-05 0.0011 20.0 0.6 1 23 601 623 601 623 0.98
9 38 0.0003 0.032 15.4 1.6 1 23 629 651 629 651 0.96
10 38 9.1e-05 0.0095 17.0 1.8 1 23 657 679 657 679 0.98
11 38 2.3 2.5e+02 3.1 0.3 2 23 927 949 926 949 0.90
12 38 0.1 11 7.4 0.8 1 23 961 984 961 984 0.96
13 38 0.14 14 7.0 3.5 1 23 999 1022 999 1022 0.93
14 38 0.0005 0.052 14.7 5.8 1 23 1028 1050 1028 1051 0.95
15 38 0.79 83 4.6 1.1 3 23 1058 1079 1056 1079 0.94
16 38 0.0047 0.5 11.6 0.4 1 23 1084 1107 1084 1107 0.96
17 38 1.1e-06 0.00012 23.1 0.4 2 23 1114 1135 1113 1135 0.96
18 38 3.5e-06 0.00037 21.5 0.4 1 23 1141 1163 1141 1163 0.97
19 38 0.00012 0.013 16.6 1.0 1 23 1169 1191 1169 1191 0.98
20 38 0.015 1.6 10.0 0.5 1 23 1343 1366 1343 1366 0.94
21 38 0.00011 0.011 16.8 2.0 1 23 1368 1391 1368 1391 0.95
22 38 1.3 1.4e+02 3.9 2.7 1 23 1397 1420 1397 1420 0.90
23 38 9.2e-05 0.0096 17.0 0.6 1 23 1426 1449 1426 1449 0.96
24 38 6.8e-05 0.0072 17.4 0.3 2 23 1456 1478 1455 1478 0.93
25 38 0.0026 0.27 12.4 0.6 1 23 1483 1505 1483 1505 0.96
26 38 3.8e-07 4e-05 24.5 0.3 2 23 1512 1533 1512 1533 0.97
27 38 0.00051 0.053 14.7 2.9 1 23 1539 1561 1539 1561 0.98
28 38 1.2e-06 0.00013 22.9 0.5 1 23 1567 1589 1567 1589 0.98
29 38 0.048 5.1 8.4 0.2 1 23 1741 1764 1741 1764 0.96
30 38 3.9e-05 0.0041 18.2 1.1 1 23 1770 1793 1770 1793 0.97
31 38 0.02 2.1 9.6 1.8 1 23 1800 1822 1800 1822 0.98
32 38 0.0033 0.34 12.1 0.5 1 23 1828 1850 1828 1850 0.96
33 38 0.08 8.4 7.7 3.9 1 21 1855 1875 1855 1878 0.95
34 38 0.00013 0.013 16.6 4.5 2 23 1891 1913 1890 1913 0.96
35 38 0.0013 0.13 13.4 0.6 3 23 1925 1945 1924 1945 0.98
36 38 3.9e-06 0.00041 21.3 0.7 2 23 1952 1973 1952 1973 0.97
37 38 0.00013 0.014 16.5 1.8 1 23 1979 2001 1979 2001 0.99
38 38 1.2e-07 1.3e-05 26.1 1.8 1 23 2007 2029 2007 2029 0.99

Sequence Information

Coding Sequence
ATGCCATTGCTGCAGAAatcAGTGACAATAAAGGACAGAAACGGCAAGCTCATTCGAATTCACTGCAGACAAGTGATCGACGACGAAGGCAACCTGTTCGAAGCAATAGTTCCTCCCTCAAGCATAATTCCAAAGAGCGAGTCGGAGCAAGACTTTCAAGGCGACGATGATGACTTCGAGGAGGTAACGATCGACGGAGTCAGCCCCTCTATTGCTCCAACGCCTATCATTCCTGAACCGCGGCCTAAGAACTCGACTGTCTTCATGTGCAAATCGTGCAAGATTTTCTTCCCGGTGAGGCACATGCTAGAGAAGCATACGAAGACTGTACACAAAATCAGCTCGCCGAGCGCAACCAGGAAGCGCAAGCCAAGCTTCCTTGAGCGGATGAAAGAGAAAGCCGCTGGTTACCACAAAATACAatacagtaataataataaatatggaTGTAATTACTGTCTTTTCTTGACATTTGATAAAAGTGTGATGGAAAGGCACGTTAAAAGAAGGCACTCTGATAAAAAACAATCAGTGGCGGTGAAAACTCCCTCTGTTGTGGTGGTTATTGAAAGGGCTAATGAAATCAATAATATGCAAGAAGAAGAGTTTGAGGAAATGAAGCTTGAGCCAGAAGTGACGGTTGTAAAGCAGTCGATTAGAAACGAAACAGATTTAGTAGAAGGTGACATGGAAATGATTGAAGCAGAAGGAATCATCGGTGACGCTCTCGATGATGAAAGCATGAACATAGAAGAAGTAAATGTTGAAGATCCAATTTCAATTGAAAGTGAAGTGTTTCAAATAGATAACGAGGAACAAATTTCAgcggaaaatttagaaattattgaaaacaatcGCCTACTTCAAGTTGAAAACGAAGAACTTATTCAGGACGTAAATGAAGAACTAGTTCAACACGAAGTATTTGTGCAAAACGAGGAACTAGTTCAAGCGGAAGATATAGAATTTCTTCATGTTGACTGCGAAGAAGTAATCGAAGCAGATAACGAAGTACTGATTCAAGCAGACAACGAAGTCCTGATTCAAACAGAAAACGAAAACTTTGCAGCAGAAAGTCAAGACCTCGTTAATGAACAAAACATACTTACAGAACAGTTTGGAGAAGACCTCAGTTCAGATGTATGGACAGAGGAGGATGGAACAAAAAAAGGTGAACTGTACACTTGTCCGTACTGCAACTACGACGGGAATACTCGTACAGCGGTGCATAATCATATCCAAAAATGCCACTACGATGAGTGGATCGCAGCAATCGCTCGAAAGGATCGACGAAGAAAACCTTACAAAAAGCCAGAGTTTCAATACGGACCGAAGGTTCGCTCGTTCCCTTGCGAATACTGTGATTATGCGGCGACGAACAGGCCGAATCTCAATTCGCACATGAAACACAAACACCCAGAAATTGAGCGGGAGCCACGCCCCAAGCAGACTACGGAGTTTCAGTGCGATCTATGCGAGTTCAAGACGACGGAGCGacgcaaaattcaaattcacaTCGAAAGGAAGCACGTTACCGAGAGCCGATATCCCTGCGAGTACTgcggtaaaaaattcaaggttAAATGCGACCTGACGTCTCACATCCGTTTCCAGCACTTGAGGGTTCCGTGTGTGTGCGACGTGTGCGGCAAGATTTGCACTAACAGCAACGCCCTGCACGTACACCAGAAGCGTGAGCACTACAAGCCCGAGTTCGAGTGTCAGATCTGCAAGAGAAGGATGGTTTCGCAGGAGAATCTGGACGAGCACATTCAGAGGCAGCACGAGCAGAGAATCAAGTACATGTGCGAGCAGTGCGgtaaggttttcgaccaaccCAATAAGCTCAAGCAGCATTCTATGACGCATACGGGCGAGCGACCGCATATCTGCCACCTGTGTGGAAAGGCTTTTGCCAGAAGAGCCGTATTTAGGCAACACTTGTTAATTCATACGGGTCAGAAACCATATACGTGTGATATTTGTGGAAAGAGTTTTACACAGAAGCCGGGACTGATCTGTCACAGAAAGATGCACCCAGGTGAAAAGCCTCCTTTGCCTGTCGTTTATATTGATCATATCCTTGATAAGTCAGAGAAGAAGTCAGCGAACCGAGCCATCTTCCTCTTCGGGCGAGAAGCGCTGGTGATGCGCAAGTGGCAAATCCTGGAGTTCGACGGCAACCCCTACTACGCCTTCGTGCCCGAGGACGACGAACCGATCAAGGAGGAAGCGATTCCCGAGCTCCAGGAGGAGTCCGCCGCTCTCGAACAAGAGCTAAATGTCAGTCAAGAGAGCGAAGACAGGAAGGAGGAGGATGAGCAGGATGATAAAGTCGATAATCGCTCGGTAGACGAAGAGACGGTCCCTGAAGAGTACATCGAAAGGCTCGAGGAAGAAATCGAGGAGCAAGATATCAAGCCTGTTATTATCAATGGAAATCTGCAGGCTCCGGAAAGCCAAGAAGctgaggaggaggaggaggagcaaaTCGACAATTCCCAAGCAGAGGTGTACCAGGTAAAGGTCGAGGGCGGCGTGGTCATGCTCGAGAAGCTCAATGTCGAAGCTATAGAAACGACAGATCAAGATGAAGGTCATACTGTCCTGCTCGCAGAAAGCGGGGATCATCCAGACGAAGAATCCCAGGACGTTCTAGGCTTCGAGCaagaagacgacgacgaggtCGTAGCTACCATTGAGGAGGACGTCGTCGAGCCCGAAGAGACCGAAGAATTCCGGGGTACCACCTCCAAAACTGGCAGCGGCGGATCGCTCAAATGCAGGGCCTGCTCAGAGACGTTCGAGTCGACGCTGGCCTTCCGCAAGCACGTGGCTTGGACACACAAGAAGAAGGTGTGCATCGTAGAGGACGGTGCCTACATCTGCTCGGTGTGCGACTACCGGACGTTAAAGAAGAGCCAGTTTGCGGCCCATCTACAGCGACAGCACGAGACGTGGCAGCGTAAGCGACAGAGCTCCTCCTCGGCGATGTTCCCCTGTGCCGCCTGTGGCTTCGTCTGCCGTTCTAAACACTCTCTTCAGTCGCACTTTATCCGCAAGCACACGGATCGCTACGAACACCAGTGCAAGTTCTGCCCCAAGAAGTTTAAAGTCAAGGGCGACCTCACGAACCACGTGCGCTTCCATCACAAGGAAAAGCCTGTGCACTGCGACGTCTGCGGAAAACTCTGCTTGAACAGCGGCTCGCTCTACGTGCACCAGAAGTGGGCCCATTACAAACCCAAGTTCGAGTGCACCATCTGTAAGAGAAGGATGGTCACGCAGGAAAATCTCGACCAGCACATGGTCATGCAGCACGAGAAACGGGAGAAAATCGTCTGCGCCGAGTGCGGCAAAACCTTTACTAAGAAAGATTCTTTCAAGAGACACATGGCAGTGCACACTGGGAACAAGCCCTACAATTGTGTAATTTGCAACAAGCCCTTCGCCAGGAGGTCGCAGCTCAGGCAGCACCTCCTCATTCACACAGGCAAGAGGCCCTTCGTCTGCGACATCTGCGGCAAGGCTTTCACCCAAAAGCCTGGACTTATATGTCACAGGAAAACTCATCCCGGAACACATCCGCCCCTCCCGGTGATGCCGATCGGTGATATTGTTAAGGAGTTCACCGAAGGATTCTTGAAAAACCATCCTCAGGGCGCTGAACTCGGAGAGGATCACGACGACCTCGAAGATgaggaagaagaggaggaagagtACGAAGAGGAAGAGATAGATCGTGAAGAAATTGTTAAGTCCGAGGTTGTCGAGGAAAATGTGGTGCACGAAGGCATGGAAGAgAGGAAGACAACGTTACGACGAGCAAGACTCCGCAGGCGTTTCGCAGCAATCTCAACGACAACGATCGGCAGTCCAACGATACGATCCAGCAGGCGAAAACGACCGGATCAAGTTCCACCTAGTCCCGAGCGACCCTCTCGCGTCTCTCAGCGGCGACGCAACGACTTGCCCCCGAAGAAGCTCAAAATTGCTGAGCCCAGTCCCGAGGAGGAAGGCGAGAGACACCCGTGCGACAAGTGCGTCGAGTGCTATTCGACCGCTGAAGCTTTAGCGGAGCACGCGCGAGCAAAGCACATATTCCAGTGCGAGCACTGCCCGCAAAACTTCCGACAGCGCAAGCTCCTCAGGCTGCACATACAGGACGAGCACAAGCACATGCCCAAGTACGTGTGCAGCGAGTGCGGCAGCATCTTCAAGTGCCGGCAGTCGCTGCGCGAACACTTCGTCCGCAAGCACACGGAGGGCTTCCGCTTCGTCTGCGCCACCTGCGGCAAGAAGTTCAAGATGAAGAGCGACCTGTACATGCACGTGCAGAGCATCCACAGCGAGGAGCGCGAGGTCGTCTGCGACGTTTGCGGCAAAACCTACCGGAACGCCTTCGCCCTCAAGAAGCACCTGGCGCACGCGCACAATCAGCGACCTTACGCCTGCGAAATCTGCAAGCGCAAGCTCGCCACCAAGGAGTCGCTAGAGCATCACGCCCAGCTGCACCTCAGAAAGGAGCGCGCCGTCTGCCAGGTTTGCGGCAAAACCTTCAGCGGTAACGACGCGCTGAAGAAGCACATGAGGATACACACGGGCGTGAGGCCGTTCCCTTGCAAGGTCTGCGGCAAGGCTTTTAGAAGGCAGAATACGCACAAGCAGCACTTGCTTACCCACACCGGAGTCAAGCCCTACATATGTGATATTTGCGGCAAGAGCTTTACCCAGAAGCCGGGCTTGATCACGCACAGGAAGAAGCACCCTGGACccctgccgccgctgccggcgATTTCGATAGATTACGTCATTGCTGATTTGATGGAGAAGCAGGATGCTAATAAAGGGCAGCCTGTCGATGAGGTGTTGTCCGAGGATATTAATCTTACAAGCTTGACGCCATTGACGCCGATTCTCACGGACTTCGAAACATCGATGTTCCCGATGCCAGATTCCTTATTTTTCACCGCATCCGAAGTTCCTGACTTGGTCGACTCGGAGGTTTTGATCTTCGAGCAAACGAACTCAGTCTTCGCGGAAGAAATCGTCGAGTTCTCCAAATCAGAAGAACTACCCTTCGCCAACGTAGAGTCCATGAACTTGAACGATATGGAAGTCCCTGTCCTTTCCATCCCAGAAACCGATTCCATAAGCAAAGCAAGAGAAGACCATCAGGTCGTGCCGAACGCCGAACGTCCGCAACGCTTTCGCGTAAACCATTACTGTAACGTCTGTCTGGCTGGGTTTACCAACGAGGCAAAGCTCGGCGAGCACATGCAGAGCATCCACAATATCGAGCGGCCCTTCGAGTGCAATATCTGCGGTCAGACCTTCCGCACGTCGCTGAACATCGCGCGTCACAAGCGCAGCAAGCACGACCTGGACATTAAGAAATACAGCTGCGACCGGTGCAAGTACACCACTTACGCGAAAAAGAACCTGGAGATCCACGAGCGACGTCACTCCAAGAGCTACGCGTTCCCCTGCGACCTTTGCGGCAAAGGCTTCATGCAGCGCACCAAGTTCGAGGAGCACAAGCTGCTGCACGACGGCAAGGGCTACGAGTGCCAGGTCTGCAAGAACGTCTTCCATTACAAGCGCAACCTCGTCACCCACATCAAGTGCGTCCACCCGGAGACGGTCGGCAACTACAACGGCAAGCTCCTCCAGTGCAAGTATTGCCCGCGCAAGTTCACCAACGAGAACAGCTTCAAGAGACACCATAGGGTCAGTCATAAGAACttcctgccgccgccgcagaaATCGCTCTGCGACTTGTGCGGCATGCAGCTGAGCACGCCGACTGCTCTGCGCCACCATATGAGGGGACACAAGGGGGAGAAGGTCGCCGAGTGCGACGTTTGCGGCAAGTCTTTCTCCAAATTGAATAATCTCAAGGTTCACAAGAGGATCCACACCGGGGAGAAACCGTACAAGTGCACCTTCTGCGACAAGGGATTTACGCAGAGGACCAGCATGGTGTACCACGTGAGAGTGCACAAAGGCGAGAGGCCGTATCAGTGCTCCGACTGCGGCAAGTCATTCATCTCCAATTCTTTCCTGAGGAAACACGTCAAGACGCACGAGAAGAGCGTGAAGGGCAACGACGAAATAAAATGCAACTAG
Protein Sequence
MPLLQKSVTIKDRNGKLIRIHCRQVIDDEGNLFEAIVPPSSIIPKSESEQDFQGDDDDFEEVTIDGVSPSIAPTPIIPEPRPKNSTVFMCKSCKIFFPVRHMLEKHTKTVHKISSPSATRKRKPSFLERMKEKAAGYHKIQYSNNNKYGCNYCLFLTFDKSVMERHVKRRHSDKKQSVAVKTPSVVVVIERANEINNMQEEEFEEMKLEPEVTVVKQSIRNETDLVEGDMEMIEAEGIIGDALDDESMNIEEVNVEDPISIESEVFQIDNEEQISAENLEIIENNRLLQVENEELIQDVNEELVQHEVFVQNEELVQAEDIEFLHVDCEEVIEADNEVLIQADNEVLIQTENENFAAESQDLVNEQNILTEQFGEDLSSDVWTEEDGTKKGELYTCPYCNYDGNTRTAVHNHIQKCHYDEWIAAIARKDRRRKPYKKPEFQYGPKVRSFPCEYCDYAATNRPNLNSHMKHKHPEIEREPRPKQTTEFQCDLCEFKTTERRKIQIHIERKHVTESRYPCEYCGKKFKVKCDLTSHIRFQHLRVPCVCDVCGKICTNSNALHVHQKREHYKPEFECQICKRRMVSQENLDEHIQRQHEQRIKYMCEQCGKVFDQPNKLKQHSMTHTGERPHICHLCGKAFARRAVFRQHLLIHTGQKPYTCDICGKSFTQKPGLICHRKMHPGEKPPLPVVYIDHILDKSEKKSANRAIFLFGREALVMRKWQILEFDGNPYYAFVPEDDEPIKEEAIPELQEESAALEQELNVSQESEDRKEEDEQDDKVDNRSVDEETVPEEYIERLEEEIEEQDIKPVIINGNLQAPESQEAEEEEEEQIDNSQAEVYQVKVEGGVVMLEKLNVEAIETTDQDEGHTVLLAESGDHPDEESQDVLGFEQEDDDEVVATIEEDVVEPEETEEFRGTTSKTGSGGSLKCRACSETFESTLAFRKHVAWTHKKKVCIVEDGAYICSVCDYRTLKKSQFAAHLQRQHETWQRKRQSSSSAMFPCAACGFVCRSKHSLQSHFIRKHTDRYEHQCKFCPKKFKVKGDLTNHVRFHHKEKPVHCDVCGKLCLNSGSLYVHQKWAHYKPKFECTICKRRMVTQENLDQHMVMQHEKREKIVCAECGKTFTKKDSFKRHMAVHTGNKPYNCVICNKPFARRSQLRQHLLIHTGKRPFVCDICGKAFTQKPGLICHRKTHPGTHPPLPVMPIGDIVKEFTEGFLKNHPQGAELGEDHDDLEDEEEEEEEYEEEEIDREEIVKSEVVEENVVHEGMEERKTTLRRARLRRRFAAISTTTIGSPTIRSSRRKRPDQVPPSPERPSRVSQRRRNDLPPKKLKIAEPSPEEEGERHPCDKCVECYSTAEALAEHARAKHIFQCEHCPQNFRQRKLLRLHIQDEHKHMPKYVCSECGSIFKCRQSLREHFVRKHTEGFRFVCATCGKKFKMKSDLYMHVQSIHSEEREVVCDVCGKTYRNAFALKKHLAHAHNQRPYACEICKRKLATKESLEHHAQLHLRKERAVCQVCGKTFSGNDALKKHMRIHTGVRPFPCKVCGKAFRRQNTHKQHLLTHTGVKPYICDICGKSFTQKPGLITHRKKHPGPLPPLPAISIDYVIADLMEKQDANKGQPVDEVLSEDINLTSLTPLTPILTDFETSMFPMPDSLFFTASEVPDLVDSEVLIFEQTNSVFAEEIVEFSKSEELPFANVESMNLNDMEVPVLSIPETDSISKAREDHQVVPNAERPQRFRVNHYCNVCLAGFTNEAKLGEHMQSIHNIERPFECNICGQTFRTSLNIARHKRSKHDLDIKKYSCDRCKYTTYAKKNLEIHERRHSKSYAFPCDLCGKGFMQRTKFEEHKLLHDGKGYECQVCKNVFHYKRNLVTHIKCVHPETVGNYNGKLLQCKYCPRKFTNENSFKRHHRVSHKNFLPPPQKSLCDLCGMQLSTPTALRHHMRGHKGEKVAECDVCGKSFSKLNNLKVHKRIHTGEKPYKCTFCDKGFTQRTSMVYHVRVHKGERPYQCSDCGKSFISNSFLRKHVKTHEKSVKGNDEIKCN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-