Basic Information

Gene Symbol
Kdm5a
Assembly
GCA_035582975.1
Location
JAWWEO010000021.1:5844160-5854523[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.8e-25 1.2e-21 77.6 0.0 2 89 117 200 116 200 0.94
2 2 2.2 9e+03 -2.2 0.0 50 65 1081 1096 1073 1107 0.78

Sequence Information

Coding Sequence
ATGGTTTCGAAGCTGCACGGAGCCAGTAACAAATACCAGTGCAGCGGGGGCCAGTTTTCGGAGAGCTTTGCCGCAAGCAGACGAGCCACGGAAAACTCGACGATGGCCCAGCGGGAGGACTTTGACTTTCAACCGCCTCCCGAGGCACCAGTTTTCGAACCGACTAGCGAGGAGTTTCTCGATCCTCTCGGCTACATTGCCAAGATCCGGCCTATCGCCGAAAAGTCGGGCATCTGTAAAATCAAGCCGCCACCCaattggcAGCCACCATTTGCTGTGGATGTtgacaaattcaaatttgttcCAAGAATACAAAGGTTAAATGAGTTGGAGGCAAAAACAAGAATCAAACTGAATTTCCTGGatcaaattgcaaaattttggGAGCTCCAAGgatcttcattaaaaataccaTTAGTTGAACGTAAAGCACTGGATCTATATTCATTACACAGAATTGTGACTGACGAGGGTGGTATTGAAACAGttacaaaagaaagaagatgGGCAAAAATAGCAAACAAATTAGGATACCCTTCTGGACGAAGTGTTGGCAGTATTCTTAAAAGTCATtatgaaagaattttatatccATTTGACGTATTTAAACAAGGGAAAACTTTAACAGACATTaaaattgaacCAGACAGTGATGTCAATGAAAAAAAGGACAGAGATTACAAACCACATGGAATTATATCACGACAACAGATTAAACCACcacaagaaaaattttctcgtCGATCAAAGCGATTTTCTGGACaagatgaaaaacaaaatggaTGTCCGTCAAGCATTAAACAGGAGGACTGTAAAGAGGAGTTTGATACTGATTgcaaaactaatattaaagGCAAAAGTTTTGTTGAAAGTAAGGCCAATAATggcaaaggaaaaaatatagtaGACTCCAAAGATggcattaaaaCTTTGCCGGATAGTAAAGATAATATCAAAACCAGAGCATCAGgaatagaaaaagataaagaaaatagtaaaGAACTTaagaaattgcaattttatggAGCTGGTCCTAAAATGGCTGGTTTCAATACCaaagaaactaataaaaaatcaaataaaaccaGAGGCGTTAAACTAGTCTATGAATTTGACCCACTTGCTAAATATATTTGCCACAATTGTGGAAAAGGAGATAACGAAGAAAATATGTTACTTTGTGATGGTTGCGACGATAGCTATCACACATTTTGTTTGTTACCACCATTAACAGAAATTCCAAAAGGAGACTGGAGATGTCCAAAATGTGTTGCTGAAGAAGTATCAAAACCAATGGAAGCTTTCGGTTTCGAACAGGCACAAAGGGAGTATACTTTACAACAGTTTGGCGAAATGGCAGATCAATTTAAAAGTGATTATTTTAACATGCCTGTTCATATGGTCCCAACTGAACTCgtggaaaaagaattttggaGAATAGTGTCTTCTATCGACGAAGACGTTACCGTTGAATACGGAGCTGATTTACACACCATGGATCACGGTTCTGGTTTTCCAACTAAAACTAGCGTTAATCTTTTTACGTGTGATCAAGAATATGCAGAGTCTTCCtggaatttgaataatttaccgGTACTGCAAGAAAGTGTTCTTGGTCACATTAACGCCGATATAAGTGGTATGAAAGTTCCATGGATGTATGTAGGAATGTGTTTTGCTACGTTCTGCTGGCACAATGAGGATCATTGGAGTTATTCTATTAATTACTTACACTGGGGTGAACCAAAAACGTGGTATGGTGTTCCTGGTTCTGAAGCTGAAAAATTTGAGCATTCAATGAAATCTGCTGCACCAGAACTCTTCCATAGCCAACCTGATTTACTTCATCAATTAGTTACCATAATGAATCCTAATATTCTTACTAGTGAAGgTGTGCCGGTATTCAGAACAGATCAGCACGCTGGAGAATTCGTTGTTACTTTTCCCAGAGCTTATCATGCAGGATTTAATCAGGGTTACAATTTTGCAGAAGCAGTGAATTTTGCCCCTGCTGATTGGCTAAAAATTGGAAGAGAATGCATTGCGCATTATTCGAATCTCAGACGATTTTGTGTATTTTCTCACGACGAATTAGTTTGTAAGATGTCTTTAGATCCTGATAGTTTAGACATTGGTATTGCTACTGCAACATACCACGATATGCTGACTATGGTTGAAGATgagaaaaaattgagaaaaaatttactagagTGGggTGTAACCGAGGCAGAACGTGAAGCTTTTGAACTTTTGCCTGATGACGAAAGACAATGTGAGGAATGTAAAACTACGTGCTTTTTGAGTGCAGTGACATGCTCGTGTCACGATTCGCAATTAGTTTGCCTCAGacattttagatatttatgcAAATGTGCTCCTGAGAATCATACGTTACGATACAGATACACTTTAGACGAACTCCCAATCATGTTACAGAAACTTAAATTGAAAGCTGAGTCTTTTGACTCGTGGGTAAGCAAGGTCAAAGAAGCTATGGATccaaaaggagaaaaaattgaacttagcgaattaaaagatttattagatGAAGCAGAAGTCAAGAAATTTCCAGAAAGCGAACTACTTACCGCTTTAACAACTGCAGTACAAGATGCAGAAAAGTGTGCTAGTGTAGCAAGACAATTATTGAGCAACAAACAAAGAACTAGaaCAAGACAATCAGTTGAAGCAAAGTTTAAACTTACCGTTGaagaattaactttatttcatAAAGAAATAACAAATCTTTGTTGTGAATTAAAAGAAGCAGATGGTGTCAAGTATATCTTGGATCAGGtacttcaatttcaaaaagatGCAGAGGAATTAGAAACAAGAGAAGTCGATTGTGATATtgataaacttgaaaaatgcATAGAATACGGTGACTCTATTTGCATAGAACTACCTCAACTTATAAGATTAAAACAgaaattacaGCAATTGCGTTGGCTAGAAGAAGTGAAGTCTATTCAAGAAGAACCACAATCTATTACTCGACAAGATTTGGGAAGGTTAATAGAAGAGGGTATGAATATTCCTCCCCATTCAATGATTGAAAATGCTTTAGCGCAACTTCAAGCTCTAATGATAAGTATAGATAATTGGGAAGACAAAGCTAAAATTTATCTTCAAGCTTCAAAAAACAGACAAACGATCGCTTCTGTCGAAGAGCTTATATCTGAAGCAGATAATATTAATGCCCATTTACCTGGATTAAATAATCTCAAGGATATTTTAAACAAGGCTAAGAATTGGACCAAAATTGTTGAGGAAATACAAGCAAAAGAGAATTTTCCTTACTACGATACTTTGGATGAATTAGTACGTAAGGGTCGAACAATTCCGTTACATCTTGCTGCTTTACCGGTTCTAGAATCAACTTTAGCTCAAGCAAAAATATGGAAAGAAAGAACTGCTAGAACATTCCTTAGAAAAAATTCGCATTACACATTAATGGAAGCTCTTTCACCTAGAATTGGTGTTGGGTTACATGCTATGAAAActcggaaaaataataaaggagaAGATTCTATTGGAGCTGTATACGTTTGTGACACGAAATTGGATGATTCCAATGATTCGGCAACTGTTGTAGCTGCATTTAAATTAGCAGAACAGCGTGAAATGGAAgccatgaaaaatttaagagaaagaaatattaataaaatgcaagTTGATGATTCGAGATTTTGCGTGTGTCGTCGATCGAAATTTGGTCAAATGTTACGGTGCGAACTTTGTAAAGATTGGTTTCACACAAACTGCGTCCCTGTTCCTAGAACCCCTTACAAAGGCAAGCAGCAAAATGCACGAGTTACTAAATTCTTGTGTCCTTGCTGTTTACGTTCGCGTAGGCCACGGTTGGAAACAATTTTGTCTTTGTTGGTAAGTCTGCAGAAAATTCCTGCTCGGTTACCAGAAGGTGAAGCTTTACAATGTTTAACCGAGCGAGCAATGAACTGGCAgGACAGAGCAAGGCAAGCTTTATCTGCTGAAGAAGTATCCTCAGTTTTGGCAAAGCTTAGCATTTTATCCCAAAAATTAACAGAAGCTGCTGCTagagaaaaaactgaaaaaattataagtactGAACTGAAGAAAGCTGCAAATAATCCAGAACTTCACCAAAGGGTTCAAGCAATTGCTTCTATAAGTGGAGTACATTCTGACGATAGTGTACTAAGCGTTCCTgaTGATGATGAAAAAATGGATGAAGATGACGAGGATGAAGATGACGACAGTGATGACGACGTATTAACCATCGATGAAGATGAACCCAACACTGGCAGATTTAATAGTAATGAGCATGCTTACTCATCAgcgtCCAAATTCCCTTCCAAATCAACTATCGGAGACGACAAAGATAAAACAATGACTCTGTCTAACAATACTACAACTCGTTTAGAAGAACTAATGATGGAAGGAGACCTTCTAGAGGTAGCTTTGGATGAAACTGAACACATTTGGCGAATTCTCAGTCAAACGTGTACTTCGTCGTCCAAAAGCGTTCGAAAATATGCCCCTCTAGACCAATCGACACCCAGTACAGATACGAAGGATGTTAAAAAACAACCTCAACAACGAGGTCGCAAACGCAAATCTGATGAATTTGAAGCAGGGAAAAAAATTGGCCGACAGAGAATGGATGAAAAATCTATACCTAAGCGTAAaggattaaataaagaaataaaatcagttaCTCCGTCTGGTCCAATGAAAAGGGGACCGCGTAAGataaaAAGAAAGGATAGCGATGAAGGacctaaaagaaaaactggaaatagaaaaaagaccAAACAAGATACGTCTGACGAGGAAGAAGATTGTGCTGCTATAAATTGTTTGAGACCAAATGGTCGCGAAGTCGACTGGGTTCAGTGTGACGGTGGCTGTAATGGATGGTTCCATATGCATTGCGTTGGATTGGATCGTACAAAACTTGCCGAAGAGGATGACTATATTTGCAGTAACTGCAGTGAAGCAGATCGAAACTCTTCGAGCCAACAGGACTACTACTATTCATCGCAGTCGTCTCATACCGAGTTCACAGACGAGGAAGACGAACAAGTGGAAGAAGACGCGCAAGAAACTGTCAACGTCATTGGGATCTATTAG
Protein Sequence
MVSKLHGASNKYQCSGGQFSESFAASRRATENSTMAQREDFDFQPPPEAPVFEPTSEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGSILKSHYERILYPFDVFKQGKTLTDIKIEPDSDVNEKKDRDYKPHGIISRQQIKPPQEKFSRRSKRFSGQDEKQNGCPSSIKQEDCKEEFDTDCKTNIKGKSFVESKANNGKGKNIVDSKDGIKTLPDSKDNIKTRASGIEKDKENSKELKKLQFYGAGPKMAGFNTKETNKKSNKTRGVKLVYEFDPLAKYICHNCGKGDNEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLQESVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECIAHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLTMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEECKTTCFLSAVTCSCHDSQLVCLRHFRYLCKCAPENHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGEKIELSELKDLLDEAEVKKFPESELLTALTTAVQDAEKCASVARQLLSNKQRTRTRQSVEAKFKLTVEELTLFHKEITNLCCELKEADGVKYILDQVLQFQKDAEELETREVDCDIDKLEKCIEYGDSICIELPQLIRLKQKLQQLRWLEEVKSIQEEPQSITRQDLGRLIEEGMNIPPHSMIENALAQLQALMISIDNWEDKAKIYLQASKNRQTIASVEELISEADNINAHLPGLNNLKDILNKAKNWTKIVEEIQAKENFPYYDTLDELVRKGRTIPLHLAALPVLESTLAQAKIWKERTARTFLRKNSHYTLMEALSPRIGVGLHAMKTRKNNKGEDSIGAVYVCDTKLDDSNDSATVVAAFKLAEQREMEAMKNLRERNINKMQVDDSRFCVCRRSKFGQMLRCELCKDWFHTNCVPVPRTPYKGKQQNARVTKFLCPCCLRSRRPRLETILSLLVSLQKIPARLPEGEALQCLTERAMNWQDRARQALSAEEVSSVLAKLSILSQKLTEAAAREKTEKIISTELKKAANNPELHQRVQAIASISGVHSDDSVLSVPDDDEKMDEDDEDEDDDSDDDVLTIDEDEPNTGRFNSNEHAYSSASKFPSKSTIGDDKDKTMTLSNNTTTRLEELMMEGDLLEVALDETEHIWRILSQTCTSSSKSVRKYAPLDQSTPSTDTKDVKKQPQQRGRKRKSDEFEAGKKIGRQRMDEKSIPKRKGLNKEIKSVTPSGPMKRGPRKIKRKDSDEGPKRKTGNRKKTKQDTSDEEEDCAAINCLRPNGREVDWVQCDGGCNGWFHMHCVGLDRTKLAEEDDYICSNCSEADRNSSSQQDYYYSSQSSHTEFTDEEDEQVEEDAQETVNVIGIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00309292;
80% Identity
-