Ooch004971.1
Basic Information
- Insect
- Ormia ochracea
- Gene Symbol
- nfxl1
- Assembly
- GCA_963402855.1
- Location
- OY727106.1:15323235-15326761[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 1.9e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 19 0.13 1.2e+03 -0.3 0.4 4 10 192 198 191 198 0.95 3 19 1.8e-08 0.00017 21.6 16.0 1 18 206 222 206 223 0.98 4 19 0.00071 6.6 6.9 15.5 1 19 259 278 249 278 0.88 5 19 0.79 7.3e+03 -2.8 1.8 5 10 302 307 302 307 0.91 6 19 1.9e-06 0.017 15.2 13.1 1 19 313 331 313 331 0.99 7 19 0.83 7.7e+03 -2.9 0.5 1 8 356 362 355 363 0.50 8 19 3.2e-08 0.0003 20.8 10.9 1 18 366 383 366 384 0.96 9 19 0.31 2.9e+03 -1.5 0.4 1 5 393 397 393 402 0.75 10 19 0.00015 1.4 9.1 16.5 1 18 418 435 418 436 0.98 11 19 1e-09 9.5e-06 25.6 16.7 1 18 445 462 445 463 0.98 12 19 0.17 1.6e+03 -0.7 10.4 9 19 508 518 499 518 0.89 13 19 0.001 9.6 6.4 7.7 1 11 530 539 530 540 0.95 14 19 0.33 3e+03 -1.6 0.9 6 10 599 603 598 603 0.90 15 19 1.9e-05 0.17 12.0 4.7 1 11 609 619 609 620 0.96 16 19 2 1.9e+04 -5.0 2.1 15 18 633 636 633 637 0.84 17 19 0.023 2.1e+02 2.1 14.5 3 18 649 664 648 665 0.91 18 19 2 1.9e+04 -5.5 2.1 9 13 671 675 670 675 0.72 19 19 2e-06 0.019 15.1 11.1 1 18 716 735 716 736 0.89
Sequence Information
- Coding Sequence
- atgtcgcaaaataaaagcaaaaaagaattttcggctaaaaattctattgaaaaattcaatgagGCTCATGCCAGAAATATAGATGTTGCTAAAAAACTAGTGGAAAATTATGTGTCATCTTCTGAAGATGAGGAGGAATTAGatgaaaagttaatattaaaaTCATTATATCAACATTATAATACGCGCAAGGAAGATGAACATCTTTTAGAAAAGACAACaggatttttagaaaatgttttgcaaagtGGTGCTGCTACGTGTCTTATATGTATTGGAAGCATAAAACGTTCAGATGGCATATGGTCttgtaaatattgttattgtttcttCCATTTGAACTGTATTCGAAGATGGTCGAATGACAGTATAGCACAGTTAAAAGCCCAAACTCAAAATGAGCAGGGCTACTACAATAATATGGGAGAATATATTCCAcctaaaaaagcaaaagcagtGCATTGGTGTTGTCCGCAATGTAGAAGTGAATTTGGTCAGGAAGAGAGACCAACAGTATATGAATGCTTTTGTGGCAAAGAAATTGATCCACCTTCACAACCGTGGCTTGTTCCGCATTCTTGCGGTGAAATATGCTCTAAAGACCTAATACCTAAATGTGGGCATAAGTGCACGCTACTATGTCACCCAGGACCATGCCCACCTTGCGCACAATATGCTATAACATCTTGTAAATGCGGAAAATCTCCTTCAAAGTCGGTACGGTGTGCTGATAAATTGTGGGAGTGCACGAAGAAATGCGGGTTACTACTACCATGTAACGAgcatatatgtaaaaatgtatgtcACAAAATTGGCCAATGCCCGCCCTGTCAGCAGACTAGTATGCAACCATGTGAATGTGGCAGTGAAATGGCAAAACGCCAGTGCTGTGAACAGAAgtggaaatgtaaaaaaccATGCGGGAAAAGTTTTGCTTGTGGCTTGcacatttgtaaaaaaatttgtcactCTGGTGGATGTGGAGATTGTCCTTTAAGTTTGCCACGATCCTGTCCATGTGGCAAAACAAAACAAATTGGTCCTTGTTCTGTGGTAGTAGATACGTGTGGTGATACTTGCCAAAAAGTACTTGCTTGTGGCTTGCACACTTGTACACAACGATGTCATAAAGGCAATTGCAATTTGTGTCTAATCATAACCAAAAAGAAATGTCGATGTGGTATGCATGAAAAAGAATTACCGTGCTCCAAGGAATTTACttgtgaaattaaatgtaaacaaattagAGACTGTGGGAAGCATCCTTGTAACCGTAAAtgcTGTGATAGAAATTGTCCGCCATGTGATAAAGTGTGTGGTAAACCCTTGTCGTGTGGTAAACATAAATGTCAATCGATTTGTCACAAAGGACCGTGTTATCCTTGCCACCAAAAATCCCAAATCAATTGCTTTTGCggtaaatcgaaaaaaaatgtaccgTGTGGTCGAGAGCGCACAGCACGTATAGTTTGTTTGGAACCATGTCGaaTTCCCTCAAAATGCCACCATGAAAATACACATCGCTGCCATAAAAAAGAATGCCCTCCTTGTACTTTGCCATGCGGTTTACCAAATGACACCTCTAACTGCGGCCATAAATGTACCGCAAAATGTCATGCGTCTGTTAGGGTggctataaaacaaaattctaatACTTCAAGGATATGGGAACCTAAAAAGCAAtttgaattaaaaaaaatgccgcATCCGTTGTGTGAGGAAAAAGTAACTGTTACATGTATTGGTGGTCACGAATCTGCTGATTACCCTTGCTGGAATTCTAAACCTTCGTCCTGCCAACGTTTGTGTAATCGCGATCTGCGTTGTGGGAATCATAAATGTGTTTTAGTTTGTCACGCAGTGCCAGATTTAAAAGATATGAAGgagCAAATCGGTTGTTCTCCATGTGAAGAAGGTTGCAATCTACCTCGACCAAAAGGTTGTACTCATAATTGTCCTAGGCCGTGTCACCTACCACCTTGCAACAATTGCaatgttgttattaaaacCAAGTGTCATTGTGGTTTAATGCCCATTGTTTATAAATGCAGTGATTTTTTTAACACTGAAGGTACcgaaaattccatttttgaGAAACAAGAATACTTGCAAAGTTGCGGGAAtagatgtttaaaaaatTATCCCTGTGGCCACCGATGCGCGGCAAAATGTCATTCGGGTATTTGCCCAAATCCAGAATCTTGCCGCAAAAAATTACGTATTTACTGCGATTGTAAACGTTTGAAGTCCGATATTTCGTGCGATAAACATCGCAGTggtcttttaaaaatacaatgtgATGAAAATTGTATAGAAGCAAAAAAGACCATGCAACAAGCCCGTCAGCAGGAAGAAGACTTCCGAAGGATGCAAGAAGAAGAACGAAATCGTTTAGAGGTggaacaatttgaaaaaaaatttagcaaacgCAAACCTAAAGAACGCAAAACtttagtaataaaacaaagtaatcCCGTCAACTGGCGACTAGTTGGAGTTTATTCTGGTATTGCAGTAGCTGTCTTTTTAGCAGTAGCCTTAGCCTTTTACGAAGATCGGTGA
- Protein Sequence
- MSQNKSKKEFSAKNSIEKFNEAHARNIDVAKKLVENYVSSSEDEEELDEKLILKSLYQHYNTRKEDEHLLEKTTGFLENVLQSGAATCLICIGSIKRSDGIWSCKYCYCFFHLNCIRRWSNDSIAQLKAQTQNEQGYYNNMGEYIPPKKAKAVHWCCPQCRSEFGQEERPTVYECFCGKEIDPPSQPWLVPHSCGEICSKDLIPKCGHKCTLLCHPGPCPPCAQYAITSCKCGKSPSKSVRCADKLWECTKKCGLLLPCNEHICKNVCHKIGQCPPCQQTSMQPCECGSEMAKRQCCEQKWKCKKPCGKSFACGLHICKKICHSGGCGDCPLSLPRSCPCGKTKQIGPCSVVVDTCGDTCQKVLACGLHTCTQRCHKGNCNLCLIITKKKCRCGMHEKELPCSKEFTCEIKCKQIRDCGKHPCNRKCCDRNCPPCDKVCGKPLSCGKHKCQSICHKGPCYPCHQKSQINCFCGKSKKNVPCGRERTARIVCLEPCRIPSKCHHENTHRCHKKECPPCTLPCGLPNDTSNCGHKCTAKCHASVRVAIKQNSNTSRIWEPKKQFELKKMPHPLCEEKVTVTCIGGHESADYPCWNSKPSSCQRLCNRDLRCGNHKCVLVCHAVPDLKDMKEQIGCSPCEEGCNLPRPKGCTHNCPRPCHLPPCNNCNVVIKTKCHCGLMPIVYKCSDFFNTEGTENSIFEKQEYLQSCGNRCLKNYPCGHRCAAKCHSGICPNPESCRKKLRIYCDCKRLKSDISCDKHRSGLLKIQCDENCIEAKKTMQQARQQEEDFRRMQEEERNRLEVEQFEKKFSKRKPKERKTLVIKQSNPVNWRLVGVYSGIAVAVFLAVALAFYEDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -