Ooch002760.1
Basic Information
- Insect
- Ormia ochracea
- Gene Symbol
- grn
- Assembly
- GCA_963402855.1
- Location
- OY727105.1:48036958-48052501[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2 1.7e+03 -1.3 0.3 8 15 40 47 38 50 0.77 2 2 4e-19 5.7e-16 57.9 6.3 1 35 79 112 79 113 0.97
Sequence Information
- Coding Sequence
- ATGCAAACCAAATCAGTACAACCGAATAAACAACATCACACAACATTTAAACTACAACATTCCCAGATTCAATCTGTAAAAAAATCGACGACTACATGGACTGATCGCTTGGCTCGATCAACCGTAGCCTgGCGTAGGAGACAGAGTAGTTTTTTCGGCGCCTCCAGTGCCAAAGTAAGTGCTGCTAAGACCCTGCAGTCGCTGCAAAGTGCCGCTAAAAGAGCGGGAACATCTTGTGCCAACTGCAAAACCACAACTACAACCCTTTGGCGGCGCAATGCCAGCGGTGAACCAGTATGTAATGCCTGTGGTCTGTATTATAAATTGCATAATGTTAACCGTCCTCTGACGATGAAGAAGGAGGGCATACAAACTCGCAATCGTAAACTTTCCTCAaaatcgaaaaagaaaaagggtTTAGGTGGCGGCTGTTTGCCCATGGGCGGCCATTTGGGGATGGGCGATTTCAAACCCCTGGATCCTTCTAAAGGTTTTGGCGGCGGCTTTTCTGCTTCAATGGcacaacATGGTCACCTTTCCAGTGGTTTACATCCAGCTCATGCGCATATGCATGGGGGTTGGTATACTGGCGGTATGGGAGCTTTAGGCGCTTCCAGCGGCTTACAGGGTGGCTTCTCAACGGCTGGCTCTTTAAGTGGCGGCGTTGTACCTCATTCTCAGCCTTATCATTTGGGTTTGGGATCGATGGGCACTTGGCGTACTGACTATACATGA
- Protein Sequence
- MQTKSVQPNKQHHTTFKLQHSQIQSVKKSTTTWTDRLARSTVAWRRRQSSFFGASSAKVSAAKTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPMGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGGWYTGGMGALGASSGLQGGFSTAGSLSGGVVPHSQPYHLGLGSMGTWRTDYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00742438;
- 90% Identity
- -
- 80% Identity
- -