Ooch009781.1
Basic Information
- Insect
- Ormia ochracea
- Gene Symbol
- hang
- Assembly
- GCA_963402855.1
- Location
- OY727107.1:50598018-50616701[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.16 9.1 7.0 0.9 3 23 452 473 451 473 0.92 2 19 0.32 18 6.1 3.4 3 22 576 595 574 595 0.90 3 19 0.017 0.99 10.1 1.6 1 22 670 691 670 693 0.90 4 19 9.8 5.6e+02 1.4 0.3 2 21 705 724 704 725 0.91 5 19 0.0015 0.088 13.4 0.2 3 23 812 833 811 833 0.96 6 19 4.1e-05 0.0023 18.3 0.1 1 23 841 864 841 864 0.96 7 19 0.00016 0.0095 16.4 0.1 2 23 953 974 953 974 0.97 8 19 0.0013 0.073 13.6 2.7 2 23 1023 1045 1022 1045 0.95 9 19 0.0052 0.3 11.7 0.2 2 23 1054 1076 1053 1076 0.95 10 19 0.0073 0.42 11.2 0.2 1 23 1089 1112 1089 1112 0.95 11 19 0.00016 0.0092 16.5 1.1 1 23 1170 1192 1170 1192 0.99 12 19 0.0025 0.14 12.7 0.9 1 23 1200 1223 1200 1223 0.96 13 19 0.023 1.3 9.7 0.4 2 20 1231 1249 1230 1249 0.95 14 19 5.1e-05 0.0029 18.0 0.1 3 23 1315 1335 1314 1335 0.98 15 19 0.0014 0.083 13.4 0.5 1 23 1370 1392 1370 1392 0.97 16 19 0.00035 0.02 15.4 0.5 2 23 1476 1498 1475 1498 0.91 17 19 1.6 94 3.8 0.1 3 20 1519 1536 1518 1538 0.91 18 19 0.13 7.7 7.3 0.9 3 23 1553 1573 1553 1573 0.97 19 19 0.0024 0.14 12.8 1.5 1 23 1839 1861 1839 1861 0.96
Sequence Information
- Coding Sequence
- ATGTCGGATGAACAACGACACCAAATtgagcagcaacaacaaatccAGCATTCACAGCAGCTGCCGAGGAGATATAATTGTTGTCGCCTTTGTTTAGCTCCAGACAATGAATGTATATCCATATTAAATAGTTATGCTGCCGATAAAGAACCTTTGGCGAGCAAAATTCATGCCTGTTTATCCATTAAGATTTCTATCGCTGATAATTTATCAGTACGAATCTGCCACTCCTGTATAAGCTTTCTAAATTCTTGGCAATCCTTTAAGAACCGATGCGTTGCAGCACAGACTAAACAACGTTCCTGGCAAGAAAACTCAAACAAGTCAATACAATCCGCAGATCAACATCACCAAACAGCAGATAATCTTTATGACGATCAACAACACCAAAATCAATATAATCAGCAATATCTGCAACAACAAGATGAACAAAATTCATTGGCGTCTTCCATATTGGAGGGaatttcaactttaaaaaaaagaaaatctataaCAGTCTATGTGAGTCCTAAATCGCAACAATCTAAACagcaacaagaaaaattattgcataaaCAGCAATTAAATGTCGTTATGCCGTTAACAAAACGTCActatacaaaacataaatataacaagTCTCATCGTCAATTGCAAAGTCAAACGTCACAGACAGAGTCACAGCGTACTGCAACAACAGGCCAGCATGTACAAGCGTTGTGTagcaaaaccaaacaaaagtCGGATAAGAAACAGATCTCAGCGAGCCAGCAGCCATTATCTACTTGTGCTCCCTTACAGCAGTCATTTGTTGTACCGGCAGTGCCATGTGTAGTTGCTCCACAAACTTCCTGCACGAATACTGTACCAACAGTGGCAACTGCCGCAACGACAAGCACTACTGCAACGCCAACACCTTCACTAGATATTCTGACTAGCACAACAATGACTACTACGGCAATGGCACCGCGTAGCAGTAGTAGTGTTCATCCCATAACCGCTGCTGTCGCTGCTGGCTCTAGTGATGATTGTTTGGTGGTAGGGTCGAACACATCTTCATCGAACATTTCTTGTACAAGTGCTGTGCAACAATTGCGTTTGTTTAGACGATACTCCTATAATCCGTTACCTGCAGTACAAATAAAAGATGAACCTCTTGAAGCTGAAGATGAATATAGCGAAGGCAAGCTTCAACAACATGATGAGTCAGATGAAATGGTTGTAGATCCCACAATGTTTTTGGAACGTACAGCTGATGAGGGAGAATTTatggaGTCTACTTCAAACTATGATTATGATGTAATAAGACCACCTGCAGACTTAAAACCATTACCAGCTAGCACAACCATACGTATGAGCACTAAGGAAGCTGCTTGCCGtgcttgtaatttaaaattttcaactcgCGCCAATGCTAGGCGGCACGAAAAGAACTTACATCCCAATCTTTTTGAAACTTTAGAGGAGAATGAACAGTCTATTAACAAGCAAAACGCTGCTTTAAATGCATCGTTGGAACTTCAAAGAGCTGTAGCAGCTGCTATGGCTGCTGATGCTTGTAAATTCTCAAGTGGTGTCGTCATAACGCCGCAAAAATATCGACAAGAGGTTgttaatgcttttaataacAGTGAATTTGGCTTTGACTATGATAATCCCGAAAAATACCGTGAGTTGTTGAcagacgaaaaaattattttccttcaaCAAAACGACGAATTCCTAAGACAATATCAAAGTATGACTTGTCGATGttgtaacaaatattattcCACCTATAAGAATTTCATGGCGCATATGCGTAAAAAGTACCTCACATTACCCAGAAATTGTTGTTTCAATTGCTTAAAACTAAATGATTCTAAAGCGTTGTTTATATCCCATTTGAAGAAACgcaattgtataaatttacataaggTGCTGCATAATCTTATGGCAAGAAATAGTAGCTTTGCAGACGCTGTAGCGGCGACAGTAGCTGCTACTCCTGATAAACTGAGGGCTAAGGAATTATTGGTCAATAAAATGTACGAGTGTAAATTGTGCTCGAAAACTTTCCGCCTAAAATTGGAATTCCGCTCACATGTCTATGATGAACATTCGAATGGGCAACCTAGAGATGTTAGCAATAGCCGGTGTTGTTATTGTGGTGTTGATATCGAAGATCCAGCTGATCGTAAGCGCCACTATAACAATATGGATTGTATTGTCACATTGCGGTGTGTTTCTTGCGATACGAAACATGAAACGCAACAGAAGTTTATGGAACATGTGCAGGATAAGCATTTATCCAACTTTGGTGAACAGTCGAAAATCGTTTCAACTACTGATAAATCTTCCAGTAAAATAACGACAACTTCATCTGCAGCCGATGACTCCCGTAGTGGTAACTTAAATGTTTCGCTAATTAATACTACACCAAAAGCTCAGTACTTTTCTCGTATGCCGCAAGCTTGTCCAATTTGTGGCCAACAATATAATAACTACAATAATGTTTTGCGACATATGGAATCGAAACATCCCGATCAGTTGCCACAAACGTATAAATGTGTTAAATGCGGTCAGGGTTATCCCAGGTTATCAaatttgagagaacatatggTCAGCGCGCATGGAGCTGATAAAGCACGTCATACCGGTTTTGAATACATTGTTAACGCAGATGCGGTTAAAAATACAAGTGGTACAACAGCTTCGGCACAAAATCCATATACGGGGCGTTATGATTATGTAATGAAGGATTTGATGTCTATAACAAATGGTGGGACAGTTGCTGAAGAAGATTGTGATAACGAAAATGCAGCTAAGAAAATGCGTTTGGATTCTAGCATTTCggtaaataataacaacagctCAGTCACCAATGTCAGCCAAAGGGAGTGCTCTATTTGCAATGCAGTGTTTGCGAATAATATTGGACTCTCCAATCACATGCGTTCACATCAAAGTGCTCAAAATAGTGGTTACAGTGTGTCAAATTCAAAAGCAGGGGCGAGTGGTAATGCCCACCAACAATCTACAACCGGTCAACACCAAATATTGAGAAAATCCTTAGAACAAGCTGCTGACAGGCGTTTCCGTCGTATGCGTTGCCGGATTTGTCAACGTCGCTTCTCTTCAAAAAAATCTTATCGTTACCACATGCTCAATGACCACCAAATTCGTAATGTACagtttataaaatgcaaattatgtGATGCCGAATTTGCATATGAAAAGGGTTTGAAGGTGCACATGTTCAAAATACATAATACGTTACTCAAGGACGATatgattataaaacaatatgagTGTGAAATTTGTTACATAGTATACCGTACGGACGTAGAGTTACAACATCATTTGGCCAATGTACATAAGAAGCATGGAGAACCATCTAACTATGATGAGGACGATATGTATAATGCCGATGAATCCGTTTCCGTTGTTAATCCCGAGAACACATCGGTAGGTGCAGATGTGTCAGGCATATCGACACCAGCTAGTGGTGTTGGGTTCGGTGACGCCCAAGCGGGTCCTTTGTATTGGTATCAATGCAAATATTGCCCCTCGaactttaatacaaataaaaaattagcaatacatataaattcgCACGATGAGTTCGATTCCAATGATTATTCCTGTAAAGATTGTGGTAATGTTTACAGTGGCCGGAAAAGTTTGTGGGTTCATCGTTATAAGAAACATCCTCAAATACCTGAACCGTCCGAATGTGTTATGTGTAAAAAGGTATTCTTTGATAATCAAATGTTAGAACATCACATACCGTCGTGTAATCGAAAACCTATAACTCAAGCGGTACATGACACCGCTACAGcaatatacaaacataaaactGGTGATGATGAGGATGAAGATGATGATGAACATTCTCGGGATGCCACAAAAAGCTTATCAACTGCCATTAATGCTACTGTTGGAAGCGCCAGtagcttgaaaataaaattacctgAAGTAGCTTGTACGATTTGTGGGGCACGTTTTAGCGATCAGGATCTGTTTGCTAAACATATTCAAGTGCATGAAAGGGAACTGTATACCGACAACCCTTTGACAGCCATGTTCGATACTGAGCCCGCAGATCCAAATCAGTTCTACATGGATTGCAAAAATGATAATGGCGAGTATGCATGCGATTTGTGTGCAAAGAAATTTACACAAATGACTGCACTTAAAGTACATAGGAAATGGCATTTCAGAGGTGATAGCAAACAGAACGAAGCCGATCAGCATACATTGAGCAATTCTCATATACAGCACTCGCAACATCAGCAACAAGCTATCAAAGTACAGCAgcatcagcaacaacaacaacagcagatGAAATCCAAGATGCCGATAAACCGTCAACATCTACTGGGATTACAAGCGGTGGGGCTAATGCCGCGCCAATTTTCCACTATGGGCGGCAGCCACAGAACCCAGAAACGTAAGCGTGAACTAAAATGCCCCAATTGTCCCTCCACTTTTATTAGCAACAACAACTTGCGGCGGCACTTGTTcgaattgcataaaaatgaaatggaatatTTACCTGAACCCCCGAAAATCGAATGTGATCTACAAAATATGTGTCGGAGGTGTAACATGAAGTTTGAAACGAAAGGTGAATGGATTGAACATAAAGTTTCAGAAGCCAGAGTAATGCGACCGTTTGGACCATTTCAATGGGGTTGTGATTTATGCGGTGCATATGTATCGCgtaaagaaaagttaataaatcatttgcaTAATCATATGAAAGATCATGTAATAGTGCCGATTGAACATCCGGAATCAAAGAAAGATTCACCGCAGCAGCCCAAGCAAGtacaaaatgaagaaaaatttaagaagcaATCGTCATCAGTTCAACCTGAAGTTCCGCCAAAGCAAACCCAAAGCAACGATTTCATCCCTGAATTCAAAAAGATCAAAATTCCTTCGTTGCAGCGGAAGCAGGAGTTGGACGATGAATCAAGTTGTGGTGGGAAAGATCAATATTATGATGAGGATGaagatgacgatgatgatgatgatgaggaaggcgatggcgatggcgatggaGAGGGCgaaacagaaggtgatggttTGGGCGAGGGAGTGGGTAGTGTTGAAGCTGAAATTGACAGTAATGAAAATGACGCTGTAGTTAAAGGTCAGCAAACACATCAAGATGTCGTAGAAGAGTATGATGAAGACGATTTTGATGACTTGGCAGTAGGAGCGCAACAAACGGTTGGCGCTCACGAAGATGTTGATGATGAagatgatggtgatggtgatgaaGAGGAAGATGATGATGACAGCAGCGAAGCTGATGACGAAGATCCATCTACTAACGAAGACACTACTGAGACATCAAatcttaaaaacaattcaacaCCGATAGTATCGCAGTCCTCCGTTTACAATGATACTGAACAGAACGATGTAGAAGACGACGACGATGATGATTCGGATGAGTtcgatgatgatgacgatgataaTTCCTCTACGGAGAATCGCAAACCACATTCTTCAGTGGTCAGTAATGTTGTTGTAAAATCTCGGCACGCTTGTGATTTATGCCAGCTATATTTCGATACACAGCAAGAGTTGCAAAAACATGtcaaaatgcattttcttaaTGGTCCCGGTTCCGTTACATTAACGGAAATTAAATCTTCGAAATCGTCGTCAAATAAAAGCCGCAGCAGTAGTAGTGACTTTGTAACTGTATAG
- Protein Sequence
- MSDEQRHQIEQQQQIQHSQQLPRRYNCCRLCLAPDNECISILNSYAADKEPLASKIHACLSIKISIADNLSVRICHSCISFLNSWQSFKNRCVAAQTKQRSWQENSNKSIQSADQHHQTADNLYDDQQHQNQYNQQYLQQQDEQNSLASSILEGISTLKKRKSITVYVSPKSQQSKQQQEKLLHKQQLNVVMPLTKRHYTKHKYNKSHRQLQSQTSQTESQRTATTGQHVQALCSKTKQKSDKKQISASQQPLSTCAPLQQSFVVPAVPCVVAPQTSCTNTVPTVATAATTSTTATPTPSLDILTSTTMTTTAMAPRSSSSVHPITAAVAAGSSDDCLVVGSNTSSSNISCTSAVQQLRLFRRYSYNPLPAVQIKDEPLEAEDEYSEGKLQQHDESDEMVVDPTMFLERTADEGEFMESTSNYDYDVIRPPADLKPLPASTTIRMSTKEAACRACNLKFSTRANARRHEKNLHPNLFETLEENEQSINKQNAALNASLELQRAVAAAMAADACKFSSGVVITPQKYRQEVVNAFNNSEFGFDYDNPEKYRELLTDEKIIFLQQNDEFLRQYQSMTCRCCNKYYSTYKNFMAHMRKKYLTLPRNCCFNCLKLNDSKALFISHLKKRNCINLHKVLHNLMARNSSFADAVAATVAATPDKLRAKELLVNKMYECKLCSKTFRLKLEFRSHVYDEHSNGQPRDVSNSRCCYCGVDIEDPADRKRHYNNMDCIVTLRCVSCDTKHETQQKFMEHVQDKHLSNFGEQSKIVSTTDKSSSKITTTSSAADDSRSGNLNVSLINTTPKAQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGQGYPRLSNLREHMVSAHGADKARHTGFEYIVNADAVKNTSGTTASAQNPYTGRYDYVMKDLMSITNGGTVAEEDCDNENAAKKMRLDSSISVNNNNSSVTNVSQRECSICNAVFANNIGLSNHMRSHQSAQNSGYSVSNSKAGASGNAHQQSTTGQHQILRKSLEQAADRRFRRMRCRICQRRFSSKKSYRYHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDDMIIKQYECEICYIVYRTDVELQHHLANVHKKHGEPSNYDEDDMYNADESVSVVNPENTSVGADVSGISTPASGVGFGDAQAGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQIPEPSECVMCKKVFFDNQMLEHHIPSCNRKPITQAVHDTATAIYKHKTGDDEDEDDDEHSRDATKSLSTAINATVGSASSLKIKLPEVACTICGARFSDQDLFAKHIQVHERELYTDNPLTAMFDTEPADPNQFYMDCKNDNGEYACDLCAKKFTQMTALKVHRKWHFRGDSKQNEADQHTLSNSHIQHSQHQQQAIKVQQHQQQQQQQMKSKMPINRQHLLGLQAVGLMPRQFSTMGGSHRTQKRKRELKCPNCPSTFISNNNLRRHLFELHKNEMEYLPEPPKIECDLQNMCRRCNMKFETKGEWIEHKVSEARVMRPFGPFQWGCDLCGAYVSRKEKLINHLHNHMKDHVIVPIEHPESKKDSPQQPKQVQNEEKFKKQSSSVQPEVPPKQTQSNDFIPEFKKIKIPSLQRKQELDDESSCGGKDQYYDEDEDDDDDDDEEGDGDGDGEGETEGDGLGEGVGSVEAEIDSNENDAVVKGQQTHQDVVEEYDEDDFDDLAVGAQQTVGAHEDVDDEDDGDGDEEEDDDDSSEADDEDPSTNEDTTETSNLKNNSTPIVSQSSVYNDTEQNDVEDDDDDDSDEFDDDDDDNSSTENRKPHSSVVSNVVVKSRHACDLCQLYFDTQQELQKHVKMHFLNGPGSVTLTEIKSSKSSSNKSRSSSSDFVTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00760325;
- 90% Identity
- -
- 80% Identity
- -