Ooch015292.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ormia ochracea
Gene Symbol
grau
Assembly
GCA_963402855.1
Location
OY727109.1:41333000-41342826[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 9.4 5.4e+02 1.4 0.1 2 23 112 134 111 134 0.85
2 23 0.056 3.2 8.4 5.3 1 23 166 189 166 189 0.98
3 23 0.0042 0.24 12.0 1.8 2 23 195 216 194 216 0.96
4 23 0.00073 0.042 14.4 2.9 2 23 226 248 225 248 0.96
5 23 7.9e-05 0.0046 17.4 0.5 2 23 254 275 253 275 0.96
6 23 0.0025 0.14 12.7 1.9 3 23 285 306 284 306 0.97
7 23 1.6e-07 9.4e-06 25.9 1.2 1 23 315 338 315 338 0.98
8 23 0.0003 0.017 15.6 0.8 3 23 346 366 345 366 0.96
9 23 0.14 8.1 7.2 0.3 2 23 543 565 542 565 0.94
10 23 3.6e-07 2.1e-05 24.8 2.2 2 23 606 628 605 628 0.96
11 23 9.8e-05 0.0056 17.1 0.4 3 23 635 655 633 655 0.95
12 23 0.00051 0.029 14.9 0.6 2 23 664 686 663 686 0.97
13 23 1.6e-07 9.4e-06 25.9 1.2 1 23 695 718 695 718 0.98
14 23 0.0003 0.017 15.6 0.8 3 23 726 746 725 746 0.96
15 23 0.0055 0.32 11.6 0.8 3 23 754 775 752 775 0.95
16 23 8.3 4.8e+02 1.6 0.4 2 23 905 927 904 927 0.84
17 23 0.0002 0.012 16.1 0.4 1 23 965 987 965 987 0.97
18 23 0.0019 0.11 13.1 3.1 1 23 995 1018 995 1018 0.96
19 23 0.00094 0.054 14.0 1.2 3 23 1025 1045 1023 1045 0.95
20 23 0.0011 0.064 13.8 0.6 2 23 1056 1078 1055 1078 0.97
21 23 7.5e-05 0.0043 17.5 1.3 1 19 1087 1105 1087 1106 0.97
22 23 0.00071 0.041 14.4 0.1 2 23 1117 1138 1117 1138 0.97
23 23 0.00073 0.042 14.4 0.4 3 23 1146 1167 1144 1167 0.95

Sequence Information

Coding Sequence
atgttgataaaTTCAGATGTAGCTCCCGACGATGATTCAAACGAAACAGGAGAGATATTTCAACAAGTTTACATTGAAGATCAAAATTGCTctactgaaataaataaaatagatacaaataaaaatcgtagCGATATTGACAACAAAATagatgaatataataaaagccaaaatgaaattgatgaGGAAATGGATGACTTATTAAATGATGAAGATgatgaaaattacaaaagctaTGACAGTGATGATTCCTCCTCAAATTCAGTTGATGCATATAAATTAGAGCAATTACATCAAGAACAGGACAAATTCATAGGGGAAAATCTGCAAATTACCTGTTCAATTTGTAATATTGCACTAGTTACCTTTGATATAATGATAAAACATTATAAGGAGGAACATAATCAGTGTGGATATGCTACTTGCTGTGATAGAAAACTATATACTCGTGCGGAAATAGTGGatcatataaatttacataaaaatccggaatattttaaatgtaaaagatgcggcaaattattaaatagccGTAATTGCCTACACGTTCACATTAAAAGGATTCACGAACAGAAAAGAGTTAAATGTAATATATGCCACAAAAGTATGGCGAATGAATCAAGTTTGAGAACGCACAAATTATTGCATGATGCTGATAATAAAGAAACGAAAATACAGTGCAAACAATGTGATAAATCCTTTCTGCATGAGCATTCCTTAGCTAATCATATGCGTCTCGTTCATTTAAACCAACATATAACTTGTGGCATTTGTGATAAATCTATAAAGGACAATTACACATTCAAACGCCACATGCTAGAGCATGAAGGAAAACAGAAATCGAAAGTAGCTTGTGAAATTTGCGGACGTATTTTATCCGACCTACCATGTTTGAAGCGGCATATGTGTTCAAATCATCCTCCATATGGAGTTAAACGTGAATTTAAATGTACTGAATgcacgaaaatatttacaagtaaTTCTAATCTTAAAGGTCATATACGGACGgtgcatgaaaaaaaatacgtaAGAAACTGTACATTATGTGAGAAAAGCTTTAGTGGGCCGGGCgccttaaaagatCATATGTCGCATCATATTGGTAAACCTTTACTTGCATGCGGTTTTTGCCCTAgagaattttattcaaatgTATTTTCCGATGATTCAAGTGAAAAAGGAGAGCTATCTGAACAAATTGTTATTGATTGTGGAGAAAACTCTCAACTTGAACCTGAAACATTATTCATAACTGAGGAAATTCCATtagaaagttttgaaaaagaagATGTGgaagaagtaaataatttaaacaaagcCAGCAAACGTACATACTCTCTAAGAAACAGTGGGAATAACAAACAAAGTATTGAAACAGATCATTTGGaagtgaaatgtaaaaaagaaatcaaggAAGTAGAGTGCAATATAAAGCGAGATgaaattgctttgaaattcgcggatgtagaaaataattgtgGAGAAACCAATGTCGATTTAAATTGCAACGGTAGtagttataattttgaaagtgaTTATGATTCTTCCTCAAATTCTTTTGATGCAACCAAATTGGAGCAATTACACCACGAACAGGATAAATTCATAGGCGAAAATTTGCAAATCACCTGTTCGGTGTGCGATATTCCATTGCCTACATGTGACACAATGATAAAACATTACAAAGAGGAACACAATCAGCGCGGATATGCTACTTGTTGCGATAAAAAACTATACAATCGCTCAGAAATAGTCGATCACATTAATCTAAGAACGCATAAACTGATACATGAAGCTGATAATGGAGAAAAAATATCCTGCAAAGAATGTGACAAGGTCTTTCGCAGAAAACATTCCTTATCAAATCACATGCGCATTGTGCACTTAAAAAGACACATAATATGCGACCTATGTGGCAAATCTATAAAGGACAATTACACATTCAAACGTCACATGCTAGAGCATGAAGGAAAAGAGAAATCAAAAGTAACTTGTGAAGTCTGCGGACGTATTTTATCGGATGTACCATGTTTAAAGCGACACATGCGCTCAAATCATCCACCAGATGGAGTTAAGCGTGAATTTAAATGTACTGAGTgcacgaaaatatttacaagtaaTTCTAATCTTAAAGGTCATATACGGACGgtgcatgaaaaaaaatacgtaAGAAACTGTACATTATGTGAGAAAAGCTTTAGTGGGCCGGGCgccttaaaagatCATATGTCGCATCATATTGGTAAACCTTTACTTGCATGCGGTTTTTGCCCTAgagaattttattcaaatggtAATATGCATGCGCATCGCAAGAAAGCTCATCCAAAAGAATGGAAGGAatcctttcaaaaaaaatattaccgtCAAAAAGTATTGGCCGAGGAtgtttcaaaagcaaaaagagATCATCTGTTAGAACAAATTGTTGATAGCCGAGAAAGTTCTCAACTTGAGCATGAGACTTTATTCATAAAGGAAGAAAATCCTTTGGAAATTTATGAAGACGAGGAAGTGGAGGagATTGAGGACGGTATAAAATTGGAAGACATAGAATATGATTGTAAAGAAAccaaactaaatgaaaatttcaataatccTAATGATGCATTTGAAAGTGATGATGATGCGTCTCCAAATTATGCTGATGCATCAAAATTAGAGCAATTGCACCAAGAACAGGATAAATTTATatcagaaaattttcaaattacctGCTCGTATTGTGATATTCCACTGGAAACATGTGACATAATGGCAAAACATTACAAGGAGGAACACAATCAACGTGGATATGCTACATGTTGTGATGTAAAGCTTTATACACGTTCCAAAATACTACATCATATTAGTTtacaaaatcatattaaaaatgtccaTGGTAGCAAACAATTCGAATGTTCTacttgttttaaagttttgtcaAATGCATCAAGTTTGCGGGCTCATAAATTGATACATGACgctgataaaagaaaaacgtttTCCTGCAAAGAATGTGACAAATCATACCTCCGAAAACATTCATTGGATAATCACATTCGCTttgtccatttaaaaaaacatataatttgtGATTTGTGTGGTAAATCTATAAAGGATAATTGCACATTTAATCGGCATATGCTGGAGCATGAAGGAAAAGCCAAATCGAAAGTAAAAGTAACTTGCGAAGTGTGTGGGCTCATTTTATCTGATAGGGGATGTTTAAGCCGCCATATACGCTCAAAGCATCCGCCGGGTGGAGTAAAGCGTGAGTTTAAATGTACTCAGTGcacgaaaatatttaccagcaatacaaatttgaaaaatcacGTATGGGGTGTACACGAAAAGAAATACGAAAGAAAGTGTGCACTATGTGAGAAAACCTTTAATGGTCCTGGCGCCTTAAGAgatCATATGTCTCAGCATACTGGTAAGCCATTACTTGCCTGCGGCTTTTGTCCCaaagaattttattcgaatagtAATATGTATGCTCATCGGAAAAAAGCACATCCCAACGAATGGAAAGAAtctttgcaaaagaaaaaatattaccacgaaaatatattagagAAGGAGTAG
Protein Sequence
MLINSDVAPDDDSNETGEIFQQVYIEDQNCSTEINKIDTNKNRSDIDNKIDEYNKSQNEIDEEMDDLLNDEDDENYKSYDSDDSSSNSVDAYKLEQLHQEQDKFIGENLQITCSICNIALVTFDIMIKHYKEEHNQCGYATCCDRKLYTRAEIVDHINLHKNPEYFKCKRCGKLLNSRNCLHVHIKRIHEQKRVKCNICHKSMANESSLRTHKLLHDADNKETKIQCKQCDKSFLHEHSLANHMRLVHLNQHITCGICDKSIKDNYTFKRHMLEHEGKQKSKVACEICGRILSDLPCLKRHMCSNHPPYGVKREFKCTECTKIFTSNSNLKGHIRTVHEKKYVRNCTLCEKSFSGPGALKDHMSHHIGKPLLACGFCPREFYSNVFSDDSSEKGELSEQIVIDCGENSQLEPETLFITEEIPLESFEKEDVEEVNNLNKASKRTYSLRNSGNNKQSIETDHLEVKCKKEIKEVECNIKRDEIALKFADVENNCGETNVDLNCNGSSYNFESDYDSSSNSFDATKLEQLHHEQDKFIGENLQITCSVCDIPLPTCDTMIKHYKEEHNQRGYATCCDKKLYNRSEIVDHINLRTHKLIHEADNGEKISCKECDKVFRRKHSLSNHMRIVHLKRHIICDLCGKSIKDNYTFKRHMLEHEGKEKSKVTCEVCGRILSDVPCLKRHMRSNHPPDGVKREFKCTECTKIFTSNSNLKGHIRTVHEKKYVRNCTLCEKSFSGPGALKDHMSHHIGKPLLACGFCPREFYSNGNMHAHRKKAHPKEWKESFQKKYYRQKVLAEDVSKAKRDHLLEQIVDSRESSQLEHETLFIKEENPLEIYEDEEVEEIEDGIKLEDIEYDCKETKLNENFNNPNDAFESDDDASPNYADASKLEQLHQEQDKFISENFQITCSYCDIPLETCDIMAKHYKEEHNQRGYATCCDVKLYTRSKILHHISLQNHIKNVHGSKQFECSTCFKVLSNASSLRAHKLIHDADKRKTFSCKECDKSYLRKHSLDNHIRFVHLKKHIICDLCGKSIKDNCTFNRHMLEHEGKAKSKVKVTCEVCGLILSDRGCLSRHIRSKHPPGGVKREFKCTQCTKIFTSNTNLKNHVWGVHEKKYERKCALCEKTFNGPGALRDHMSQHTGKPLLACGFCPKEFYSNSNMYAHRKKAHPNEWKESLQKKKYYHENILEKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01109474;
90% Identity
iTF_01109474;
80% Identity
iTF_01109474;