Ooch012327.1
Basic Information
- Insect
- Ormia ochracea
- Gene Symbol
- CSRNP3
- Assembly
- GCA_963402855.1
- Location
- OY727108.1:40205852-40210395[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.2 3.6e+03 -2.3 2.2 49 114 47 112 25 131 0.52 2 5 0.86 1.6e+04 -4.4 0.5 85 105 220 240 206 264 0.51 3 5 0.25 4.7e+03 -2.7 0.6 80 112 310 339 291 350 0.53 4 5 0.43 8.1e+03 -3.5 0.1 76 107 380 412 340 425 0.47 5 5 1.3e-94 2.5e-90 302.3 7.3 2 218 472 674 471 674 0.92
Sequence Information
- Coding Sequence
- ATGCTTACATccattaaaagctttattacATTCTTACAAAAGAGTGCAAACAACAATTCATTGTTCGGTGGAAACAGCACAACAGAAGGGTccgaaaaaatggaaaatgataTAATCAAGACAACAGaaactttttcaagttttcaGACTGAAAGTGATATTGCAAAAGAAATCGACCAAAATCTTGTTGCCAAAAATGAAGAGGTAAACGGATGTGAGCCaaatgagaaattaaataaggTTGATTATCAAATGCAGGATACAACTTCAGAAGACAATGTTTGCGAAATGGAAGATGATATTGAGGATCAAATTGAAAGTAGTATTATGTTGAAAAGGCCAGTTAAAGTTGCTGCTACAAATAGCAgagaaattttagaattaaaaaagtcaGCGCATGCTAACGGAAATATTGTCATCAGTCATGACTTTAACTGTAATCAGGCATTGAGCCCAATAGTTGATGAATTGGAAGATTTTAGGTTCGATCCTATGGCAGTATTAAGTTCAAGTACGTCTCATTGTCCTAACAAGACCTCTGACGACTTTTGCTCGATTGGTAGTTCTGAAGATATTTCacgaaaagattttaaaatattgaacaatttTCCAATCGAAAGTGATGTGAAAGAAATTGACGGtacgaaaacaaattttaatcaaagcGATGTTCTTCAGCTGGACTTGGACGATGAGGTAGAAAAAGATGTTGAACAAAATAACCTGATCGATGTTGAAGATGAGACTTTATTCgatctgaataattttaaagataaaaatgtaatagttTTAGATGATATGGACCTAAGTGCAACCGTAACTTCCGTTGATACAAATAACACATCGGATGATCCCTTAGCAATACCATTTGAAGAACAAGAAGCTTTCGCTACAGATAAGATTGCTGTTTTGGAGgaattaaatttgctaaacAATTCTCAAACTTCTCAGGACGAAGATACCCAAACAATTGCGGATGAAGATTTAGATTGGCTAAAAAgtgatagaaaaaataatctgGCATCATGTAGCAAAAATGTTAAGAATTCGGATGTTTCGCACGAAAAAGAGGAACGTAATGGCGAGGGTTCTGACTCTGGCTTAGGTAGTGAAACATCCACCTTACATACCACTATAACTAGTATTACAGATAATAGCGacataaatacaacaacaacgactACGTCAAAAGACCCTactcaaataaaatcaaaagatATTAAGAACATATTAAGCTCGAATGTGTTACGACTTACAAAATCACCACCCAAAAAACTGTGTACGCCGTATCGATCAAATTTAAAACGGCGCGTAGAAGATGATAATGGCAGTGTTGATAGTTTGGCTAACGGAGAATTCACATCATCTTTGGTCAATCATAACAGTTCTTTAAATAGCAATATGCAAAAGAAACCAAAGCGTTCAATTAATTTCGATACAGTAGAAGTGTATTATTTTCCGCGGCAGCAGGGATACAGCTGTGTGCCTTCTGCAGGCGGCTGTACCCTTGGAATGGGAGCTAGGCATATTGCAGTCAAAACAATGACTTTAGCCGAGCACGCAGCAGAGCTTCGAAGAGCCCATCGGCTGCAATTACAAGAATCCCAACCAAGAGGCAGTTCCAGTGATGATAGTGAAGAATCCGAAGAAGACTATTTAAGTGAGGGTAGTGGTTCCGATTTAGACGGAGAATCAAATGGTTTTCTACAACCCGTTTCGCCCAAGCAGCGAAGGGCTTTGTTAAAAGCAGCTGGTATTCGTAAAATTGATCCCAGTGAAAAAGTAGAGTGTCGTAATATTCGTACTAGTCGCGAGGTTTGTGGTTGCACTTGTCGTGACTTTTGTGATCCTGAAACGTGTGCTTGCACACAATCTGGAATTAAATGCCAAGTTGATCGTGATATGTTTCCTTGCGGATGCTCTCGAGATGCATGCGGGAATACTATTGGACGTGTAGAATTTAATCCAGCTCGTGTACGCACAcattacatacacacattgaTGCGATTAGAAATGGAGAATCGCCAACAAAATCCTTACACCTCCACTGTTGCTTCACCTATGCCAACAGCATCCTCCTCGTATTATCAAAACCATTTGCAGCAACAACCTAATTATAGTTCTAGTTATGCATCACCATCTTTCAATACAGAATctgaaatacaacaacaatctAGTGCTAATTTATACTACCACTCACAAAAGCCTTCTTCATCTAACATTCTGTATGGAACGCAAGCCCCCTTAGAAATTATACACAAtagtaatttaaatgttactaCAGTAGCATCACATTACGGTATAGATAGTCTGGACCCAAATCTACTTAGTAGCAACTCTACAGAAACTTCTTTATATAGAGAACTAATATCGGTGCCTTCGTATCGTTATGGAGATGTGCAACCACAAGTATCACCATATAATACGTATCACAATAccagttatataaacgccgcCAATTGTATTTCAACATCAACTAGCACATCGAACACATACAGTTCTTGTTCTGTGCCATCTATACCACCATTTGGCACGGCTACAACCACTGAGGCGTCAGGATCTTACCACAGCATCAGCAGTCTGGCTAGACTGGAGACTACTATTGCACCATCTTGCACTGTTAATGGTGTCACATCAATAGAAAAAGATGAAAGCGGCAGTTTCATAAACCTATCAACATCGCTCACCACATCCTCCAGACTCTTAgaaattaatgatttattgcaatataatCGTAGTTCGACAACAGTGCCAGTGGTCATACCCGAAATTATTGAAGATACAGAAAAGAAATCAGTCGCAGAACCATGTCGGCCACCACTCACTGATAGCaactttcaaacaaataattctttatgcCCTGCAGTAGATGCTCACCAAAGCTTTAATACATTTGAGGAACTGGAGCCGCCTCTGAAAGCGGTACCCCAAGTAACCATTACAGAAGATTATCATAAACTTAAACTAGGCAATGTAACAGCGGAAACGTTAAGAACATCAGCTAATGAAGCTTTAAGCAAAAGTGTGGATGACTTACCCTCGCTATTAAACTCAACTCAAACTGCTTTGTGCGAAGATGAGAAAAAGAGCACTGCGTTGGCGGTATGTGCTGCTATTGAAGCGGTAGATGGCGATTAA
- Protein Sequence
- MLTSIKSFITFLQKSANNNSLFGGNSTTEGSEKMENDIIKTTETFSSFQTESDIAKEIDQNLVAKNEEVNGCEPNEKLNKVDYQMQDTTSEDNVCEMEDDIEDQIESSIMLKRPVKVAATNSREILELKKSAHANGNIVISHDFNCNQALSPIVDELEDFRFDPMAVLSSSTSHCPNKTSDDFCSIGSSEDISRKDFKILNNFPIESDVKEIDGTKTNFNQSDVLQLDLDDEVEKDVEQNNLIDVEDETLFDLNNFKDKNVIVLDDMDLSATVTSVDTNNTSDDPLAIPFEEQEAFATDKIAVLEELNLLNNSQTSQDEDTQTIADEDLDWLKSDRKNNLASCSKNVKNSDVSHEKEERNGEGSDSGLGSETSTLHTTITSITDNSDINTTTTTTSKDPTQIKSKDIKNILSSNVLRLTKSPPKKLCTPYRSNLKRRVEDDNGSVDSLANGEFTSSLVNHNSSLNSNMQKKPKRSINFDTVEVYYFPRQQGYSCVPSAGGCTLGMGARHIAVKTMTLAEHAAELRRAHRLQLQESQPRGSSSDDSEESEEDYLSEGSGSDLDGESNGFLQPVSPKQRRALLKAAGIRKIDPSEKVECRNIRTSREVCGCTCRDFCDPETCACTQSGIKCQVDRDMFPCGCSRDACGNTIGRVEFNPARVRTHYIHTLMRLEMENRQQNPYTSTVASPMPTASSSYYQNHLQQQPNYSSSYASPSFNTESEIQQQSSANLYYHSQKPSSSNILYGTQAPLEIIHNSNLNVTTVASHYGIDSLDPNLLSSNSTETSLYRELISVPSYRYGDVQPQVSPYNTYHNTSYINAANCISTSTSTSNTYSSCSVPSIPPFGTATTTEASGSYHSISSLARLETTIAPSCTVNGVTSIEKDESGSFINLSTSLTTSSRLLEINDLLQYNRSSTTVPVVIPEIIEDTEKKSVAEPCRPPLTDSNFQTNNSLCPAVDAHQSFNTFEELEPPLKAVPQVTITEDYHKLKLGNVTAETLRTSANEALSKSVDDLPSLLNSTQTALCEDEKKSTALAVCAAIEAVDGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -