Basic Information

Gene Symbol
NCOR1
Assembly
GCA_963402855.1
Location
OY727107.1:51066397-51072728[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-07 0.00011 22.3 0.0 3 43 824 864 823 866 0.97

Sequence Information

Coding Sequence
ATGACTGTTTCTCGAAGATCTGGTATCTTTTTCTCTGATCTGGCAGTTGCCGATACATCGTCGTATACGAAAGGAATTAGCGGCAGTTTGGTGCCTCAAAGTCTACAACAGCAGCAAATGCATGCACAACAAATGCAGCAGCATCATCACCACCAACAGCAGATGCATCAGCAGCACCAACAtcatcagcaacaacaacatcagcagcaacaacatcagcagcaacaacatcaacagcagcaacatcaccagcagcaacagcaccaccatcaacagcagcaacaatcgTCACGTTCAGCTGCTAGTCCTCTGTCGCCACCAAGGCCCGGTCCTGGATCTCAGGCTGCTGCCAATGTTTATGCCAAATTTACTGATGTTAATGCTGTACGGGAAGCACCGCAACGTTTTATATTACAGAGTGCATATGGTATACCCGGACCAGCGAATCAGTATCGTGAAAATCCGTATACGAGAATACAAACGGTGCCAGATTATCATAGAGTGGCTGCTGCGTTGGCAGCTTCTGCACCACTTCCTGGAGCTGCTGGTGTGGTACAAACACAACCCCCGCCCGTCAGTGTTAGCATTAGTGCTCCACATGGTTTGGACTCTATGCATTTTGCACATCCACCTACCACTGTTTCAACAGGATCAACACAACTACTTAGTAATGCGCCGAATCCAGCTACGGCGGCCAGTACGACGGGTAGTATGGGTGGCACCGGTTCTCCACATGGCTCCAACAACGCAGCATCCCAAATGTCGGGAGCGGGGGGCAATACTAGTAGTATAATTGGAGGTAAACGTATGCTTATGCCACCCACGCACCGCCAGCAACCCCAACCATATTGCAATGAGTATCTGCCGAATGCTGTTTCGGCAGCGGCGGCCTTAAGTAGACACGGGCCTTCACAGGGGCCGCCCGACCCGGGCGGACAACAACCCTATAAAAAGTTACGACTGAGTGATGCGAATAATGTCACGAATATTTCAAACACTACCAATCACCTGCCTACAACAcatcaaatacaaaatgtcCAACCACCTCCGCCTAGTCAGCAACAGcaccaacagcaacagcatcaTCAACATctgcaacagcaacatcatcatcagcaacaacaacgacaaccTTCACCAGCTATAGGTTTAACGCAGGCACAATCAAATGCGTTAAGATCAGCAAATGCTTCTGCAGTTCATGGTCATTCTTCTTTGCCTCCACATACGCATTTAACAGTTCTGCCACCTGCTCATTTACCGCCGCAACCGCAGCAACAAACTCAAACAACGGTacatcagcatcagcatcaacagcaacaaccGCAACCAGTGACAATGCATCAACTTAAAGTTGAAACGCAGCAACTTCCACCACCACCAAACGCCAACACACCACCTGTAAATCGCTCTACTCCAACTTCATTGGGTATTGTTAATACGGCGTTGAATGTCATAACAAACTCTGCAGCTGGGGCAGGAATTAAGGTAAATCCTGCAGCATTGTCCTGTTCTACAATCACATCAGTTACCTCTTCTTCCGCCTCAACGACAACTGTTGCAGGCACTCTGTCAACATCGTCGGCATCCACAGAAGCTTATCAACCCCAGGTGGAGGCGATATCTCCCACCCTACCTGCGGACAGTGTCGAAGAGCGAGGTCCCACTGCCAAAGAGGAGCTGTTAAtgcaaattcaaaaagttgACACAGACATAACTAGTGCTGACAGTGCTCTAGCAGCTTTGcgtaaaaaggaaaagagtCTTTTAGATGTTGCTGCAGTAGCTAAACAACAAAAGGAGCAGGCCGAAGCGGCTAGATTAAAGGCTGAAGCTGATGCAGAAGAAGATGCTGCTAATTCGTGGCGATCTCAAACACTggcgcaaaaaatttatttggtgaACCGTAAAACGGCCGCCTCTCAACATTCCATACTAGATAGCTGTAGCGGTCGTTACTTGTTGCCGTTGTACAATCAACCTTTAGATGTTAAACAtctaactttaattttacaacGCCACCAATCACTCGTTAAGGATCCCCTGTTGGTACACATTCGTAAAATAAAGCGAGAGAGATGGACACATTACAGTAAAGTAGTAGAGACGTACGCTCAAATGTCTGCGGAGTGGCAAAAACGTATTGATAAGTCTGAAGCAAGCGCAAAGCGCCGAGCCCGTGAAGCTAAAAATCGAGAATTCTTTGAAAAGGTTTTCACAGAGTTACGTAAACAACGCGAAGATAAGGAACGCTTTAATCGCGTCGGTTCACGCATTAAATCGGAAGCTGACTATGAAGAAATAATGGATGGTTTGCAGGAGCAGGCAATGGAGGTAAGAAAGATGCGATCGTATGCCATTATACCACCATTAATGTACGATGGTtatcaaagaaaatatgtgtatCATAATGAAAATGGTATGATCGAAGACATGGTCGTTATTCATAAAGAAAGAgccaaattaaatgtttggaCAGCCggcgaaaaagaaatttttaaagaaaaattcctgCAACACCCTAAAAATTTTGGAGCTATAGCTGCCAGTTTGGATAGAAAGTCTGCACAGGATTGTGTACGTTACTACTACCTCAGCAAGAAGACAGAGAATTACAAGCAGTTGTTACGAAAATCCCGTCAAAGAACCAGAGCTTCAAAAACACTGCAGAAGtcacagcaacaacaaacgcAATGCATCATTGATTCATTGACCACAGGTGTAACAACCCGATTACAAAGGGAACAACAGCAAAAGACGGGTGGTCGATCGGCCGCTGCTGAAAGAGAGCGAGAACGTGCTGAAAGGGAAAAAGCAGCAGAGAAGGCAGCCACGGAAACGGGAAAAACAACTACATCTAATgcaaaatcgaataaaatagaaacatcATTAACAGTTGACTCGGTCTCAACAACAGCAGACATTTGTAGCACAGAAACGGCCAAAGTGTCGCCACATAATAGTGGGAGCAAATCGACAGCAACATCTTCAATACCCACTACATCCACTTCTGCGCACACCGCCACCGTCACAACATCGTCTGTAACAACTGCTGTTTCTAAAGAGGATGGCGACAAAAGTGAAACTACCACAAGCACAGATACAGCTTCAACAGGAACAGCTGCTAAAACGAAAGCAGGGGATTCTTCTCCCAAAATGGACGAATGCAAGGTGGATGATTCCAAAGAGATCAGCAAGAAAAAATCCCACGATTCTAATAACTCatcaacaacaacgacaagtgataaaattagtaatattAGTAAAACGGACGCTACAACAACAGGAAGTAACACTAATAGTAACAGCAGCTGTAGTAGTAGTACCaccaatataataaaagaagaagatCCTTTAGCAATACCCACAATCTCATTAGGAGCCACAGCTCCCACAACAACCACAGCATCTTCTTTATTAACTTCAACATCATCTGCCTatacaaatgcaaatacaaCTATAGCACCTCATCCGCCTTTAACGCCAAATGGCGTAAAATCCTCGTATGCAGCGGCAATTGCCCAACAAGTTGCTAATGCATCTGCTACAGCAAACGCCACAGTCTCTTTGGGTAATGATAGTGTCAAATCACCAAGCAACACTAGTAATAATGACAAAACTCTGGCCAACATCAATAATGAAGTCATGTCCGCCAATTCGACCAAGGACAATATAGGCATCGCATCTGCCGTCACCACTACTAGCACTAATTCCAATAGTAATAGCAGCAATGCAACCAGTAGTAGTGGGAGTTCTAGTATTGTTGGTGGCATTGTAAGTAGTAGTACGACGAAACAATTggccaataacaataataataataatgttacaACGCCGACTACCTCAACTACGGCTGGCAATTTCTTGGGCCAAAAACTTAAAGTGGCACAAGTAGAAAGCCTAATGGGggcaaataacaataataatacagaCTGTAACTCAGATGTTAGTGATCCCAAAAAGAAACGTGTTGCTGATTTGGATATTCcgagtaatttaattaatccgAATAGCAACAACAGTAACTCCACCATAAACACTTCGATTAATAGCCAGCAACCTCCAAATtccaacaatataaataaaaataattcaatgtcTATAGTAACAACAACTAACAGTAATCCTGCCAATATTcaaagcaacaataacaacgaTGATGCGGTTGCACCAGCTGTCGCAGCTGTTAGCGCTATAAGCACATTGAATGTTTTAACAACTAGCACATCGCCAATGACAACTAAACCAAATGCTATTTCGTCTGGCCACATTTCATTAGTTACAACTAAAACGTCAACCTCCTCCATTTCGTCCTCCATGAATTCCCATACTTCAACCGTGGCAACTGCAGCGAcagcaactacaacaacaactacaacgaCTCTCCCAACAGCCGAACAAAATTCGCTGGAATGCAAAGttttaaatgaTGCTGGTTATGGTATACGCAATCGTCTGTGGGAGCTACGAATTGTGATACCTTTGGTTTGA
Protein Sequence
MTVSRRSGIFFSDLAVADTSSYTKGISGSLVPQSLQQQQMHAQQMQQHHHHQQQMHQQHQHHQQQQHQQQQHQQQQHQQQQHHQQQQHHHQQQQQSSRSAASPLSPPRPGPGSQAAANVYAKFTDVNAVREAPQRFILQSAYGIPGPANQYRENPYTRIQTVPDYHRVAAALAASAPLPGAAGVVQTQPPPVSVSISAPHGLDSMHFAHPPTTVSTGSTQLLSNAPNPATAASTTGSMGGTGSPHGSNNAASQMSGAGGNTSSIIGGKRMLMPPTHRQQPQPYCNEYLPNAVSAAAALSRHGPSQGPPDPGGQQPYKKLRLSDANNVTNISNTTNHLPTTHQIQNVQPPPPSQQQHQQQQHHQHLQQQHHHQQQQRQPSPAIGLTQAQSNALRSANASAVHGHSSLPPHTHLTVLPPAHLPPQPQQQTQTTVHQHQHQQQQPQPVTMHQLKVETQQLPPPPNANTPPVNRSTPTSLGIVNTALNVITNSAAGAGIKVNPAALSCSTITSVTSSSASTTTVAGTLSTSSASTEAYQPQVEAISPTLPADSVEERGPTAKEELLMQIQKVDTDITSADSALAALRKKEKSLLDVAAVAKQQKEQAEAARLKAEADAEEDAANSWRSQTLAQKIYLVNRKTAASQHSILDSCSGRYLLPLYNQPLDVKHLTLILQRHQSLVKDPLLVHIRKIKRERWTHYSKVVETYAQMSAEWQKRIDKSEASAKRRAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADYEEIMDGLQEQAMEVRKMRSYAIIPPLMYDGYQRKYVYHNENGMIEDMVVIHKERAKLNVWTAGEKEIFKEKFLQHPKNFGAIAASLDRKSAQDCVRYYYLSKKTENYKQLLRKSRQRTRASKTLQKSQQQQTQCIIDSLTTGVTTRLQREQQQKTGGRSAAAERERERAEREKAAEKAATETGKTTTSNAKSNKIETSLTVDSVSTTADICSTETAKVSPHNSGSKSTATSSIPTTSTSAHTATVTTSSVTTAVSKEDGDKSETTTSTDTASTGTAAKTKAGDSSPKMDECKVDDSKEISKKKSHDSNNSSTTTTSDKISNISKTDATTTGSNTNSNSSCSSSTTNIIKEEDPLAIPTISLGATAPTTTTASSLLTSTSSAYTNANTTIAPHPPLTPNGVKSSYAAAIAQQVANASATANATVSLGNDSVKSPSNTSNNDKTLANINNEVMSANSTKDNIGIASAVTTTSTNSNSNSSNATSSSGSSSIVGGIVSSSTTKQLANNNNNNNVTTPTTSTTAGNFLGQKLKVAQVESLMGANNNNNTDCNSDVSDPKKKRVADLDIPSNLINPNSNNSNSTINTSINSQQPPNSNNINKNNSMSIVTTTNSNPANIQSNNNNDDAVAPAVAAVSAISTLNVLTTSTSPMTTKPNAISSGHISLVTTKTSTSSISSSMNSHTSTVATAATATTTTTTTTLPTAEQNSLECKVLNDAGYGIRNRLWELRIVIPLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-