Ooch014433.1
Basic Information
- Insect
- Ormia ochracea
- Gene Symbol
- bab1
- Assembly
- GCA_963402855.1
- Location
- OY727109.1:25985423-25987701[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-12 1.2e-08 34.6 0.0 4 45 418 459 415 459 0.91
Sequence Information
- Coding Sequence
- ATGGGTGGTCCACCGCCCCCCATGTCCTCTAATGGTACCCCAGAGGGTCAAACGTATTGCTTGCGTTGGAACAATCACAAAACTAATTTGGTAGAAATTTTAGATGCTCTCATAAAAGTTGAAAGTTATGTAGACTGTACCATAGTTGTAGATGATCAAGTGCAATTCAAAGCTCATCGTGTAGTTTTGGCTGCTAATTCACCATATTTCCAATCCATTTTGCAGGATTTACCTATGGATCATTGCAGTATTATTTTTCCGGGAGTGAAAGCTTTCGAAATGCGAGCTTTACTAGAGTATATGTATACAGGGGAGGTCAATGTTACCCAAAGCCAAATACCCAAAATAATGCGCATAGCTGAGGAATTAGAGGTTAAAGGTCTTTTCGACATGGCtgacttaaaagaaaaattcaacaaattgaatGAAGAACATACAGAGAGATCTGTTAGCAACCCTTATGCTAGTACCACGGCATCCTCTAATCCCTATTCATCAGTCACTACTACATCCTCTCCCATCACACCCACACCGAATCATAAGCCCAGTTCAAAAGATTCGGATAACTATCGTAACAATTCCCCCTATGTGATCTCCACCTCATCCAATATTTCACCGCCGGTTGCACCTTCAAGCAGTTCATCTCCACCATACAGCAGTTATAAGTCCCCCTATTCCAGTTTGTATGCCAAATCACCGGTACCAACTTTAAATCCAACTTCATCGATACAACCACAAACCATTCAACAGAACACAAGTAACCTTACCCCCACCAGTGAACGCTCCGCTCAATGGCCTTTGTCGCCTTCCGCGGTCGCTACTGCTGCCATGTTGAGTTCAGTTTATGAATCTGCTCCCGATATGAACccattaaaacgaaaaaagctCTCCTCCATGTCGAGTATGCTGATGAATCGTGACACTCCAATACTGCGCAATGTTTTAGCCCAATCCAATCCTGCAGATTCGTCACAGCAATTGCCTCTGTTATTGCCTAATGCGGTAGGTAACGTCAAAGTCGACAAACCTGCCAGCGCGGACAAGAATGTAAGCGCTCTCACCAACAATCACAGCTTCAATGGATCGGATTACAGTGAAAAGAAATACCCAGATGAACCGCATTCCCCGTTCACCGATCGCTCTTTCGAAGATGACAGTTTTGATCAGAAAGGCAACAGCTTTGGATCCACTTTTAGCAATAATTCCAGCCAAAAACCTGAGTGGAAGCGTTATAAGCAGTACACGCGCAGTGATATCATGTCAGCCATACAGTGTGTTCGTGAAGGTATGAGCGCATTGCAAGCTTCAAGGAAATTTGGTGTGCCCTCACGTACTCTATACGATAAAGTCAAGAAGCTGGGCATAACCACTGGCCGTCCAATGAATCGCACTTTGAAGCGTAGTCCCAGCAGCACAGAATCATCAGCTGCCTTCCCTTATGCACATGGTTACGGCCAAAGTACAACCACCTCTGCCATGCACGAAGCAGCTTCTCGCGACGACCGGGAATTGAAAGAACTTCAACACAGTAGCGAACATCACCACTTATCATCCAGCATTGCCCATCCAGCTGCAACGTTATTAGACCATGTGCTTCTGCAACAGGCCTTGGAAAATCGTGCTAGTGGCGATAAAGCAGGGCGTGAGGCCCTTCATGCCATGGCGTTAGCTGCAGCTGCCCATGCTGCCGCTAATCGAATCTCCACTAGCCCAGGTCCCAACGGTTCGGCTGCCCGATCTCCAAGCCCATccaattttgctttaaaatatggtAGTTTGCGAAGTGCAGAAATACAGCAAGAGCTATTGGAACGGCATGAGTTTGAACGTGAGCGAGAGAGGCAACGTGACCGCGAAAGGGAACGTGAATATGTTGAAATGGAAAGAGGTCATGATCGAGGAAGTCAGTGCGAGAGGGAGCGTGAACGTGAAATGGAGCACGACCACGACGAGGAAGATGATCATGTTGAAGACCTATCAGTGACACGAAAAGATAACAACCACTCTCCCATTTTAGAGCCCAGAGAAGGACCTCTCTCGCCTTACTCACCCCAAGTGCCAGCTCATAGCGATCTTGAAAAGTCGGTTATAATGACTACCAAATTGCCCTCAAATACTAGTGATGATGTCTTTATAAACGAAACCACTATGAAACGCGAGCTGGTAATAGACGATGTCAGAGCCGACTGA
- Protein Sequence
- MGGPPPPMSSNGTPEGQTYCLRWNNHKTNLVEILDALIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDLPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFNKLNEEHTERSVSNPYASTTASSNPYSSVTTTSSPITPTPNHKPSSKDSDNYRNNSPYVISTSSNISPPVAPSSSSSPPYSSYKSPYSSLYAKSPVPTLNPTSSIQPQTIQQNTSNLTPTSERSAQWPLSPSAVATAAMLSSVYESAPDMNPLKRKKLSSMSSMLMNRDTPILRNVLAQSNPADSSQQLPLLLPNAVGNVKVDKPASADKNVSALTNNHSFNGSDYSEKKYPDEPHSPFTDRSFEDDSFDQKGNSFGSTFSNNSSQKPEWKRYKQYTRSDIMSAIQCVREGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTLKRSPSSTESSAAFPYAHGYGQSTTTSAMHEAASRDDRELKELQHSSEHHHLSSSIAHPAATLLDHVLLQQALENRASGDKAGREALHAMALAAAAHAAANRISTSPGPNGSAARSPSPSNFALKYGSLRSAEIQQELLERHEFERERERQRDREREREYVEMERGHDRGSQCEREREREMEHDHDEEDDHVEDLSVTRKDNNHSPILEPREGPLSPYSPQVPAHSDLEKSVIMTTKLPSNTSDDVFINETTMKRELVIDDVRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00258994;
- 90% Identity
- iTF_01109427;
- 80% Identity
- iTF_01109427;