Ooch013998.1
Basic Information
- Insect
- Ormia ochracea
- Gene Symbol
- kn
- Assembly
- GCA_963402855.1
- Location
- OY727109.1:18753416-18766690[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.1e-52 3.3e-48 164.4 0.0 10 136 135 249 126 256 0.92
Sequence Information
- Coding Sequence
- ATGTCTTATTTGACTGGAAATGGCAGCCAATCGGTGAATATTTACAAGCTTACCAATCGCACACAAGAGTTTGAGGCAGAATCATTTCACAGGCGTACATGCTTACATAAATCTCCTTCTTCCTCTGAGAACAAATGCCACGATAGAAATAATCGAAAATTGATTGATAAATTGAGTTTGACGGCAGCTTGTGTGATCTCTTGTATTAGTTTCAAAGCAAACAGCTTCAAACTGCGTTCCGACGAGGCAGTACCGGGGTTTAGCTCGGCTTCACCATGGCCCACACTCGACTTAGAATGGGGCCGCAAATTATATCCCACCGCTGCTCCCCGAACGGCGGGTGGTCTAATGTTTGGTCTGCCACCTACAGCAGCGGACATGAATCAGCCGCGCGGCCCCATGACTTCGTTGAAAGAAGAACCGCTGGGAGCTCGAGCATGGATGCAACCTGTCGTCGATCAAACCAATTTGGGCATTGGCAGAGCGCATTTTGAAAAACAGCCGCCCAGTAATTtgagaaaatcaaatttttttcattttgttattgcCCTGTATGATCGCGCTGGCCAACCCATCGAAATTGAAAGAACCGCATTTATaggatttattgaaaaagactCGGAAGCGGACACTACGAAAACTAATAACGGAATACAATACCGATTACAACTGCTCTACGCGAATGgtGCCCGCCAGGAGCAAGACATTTTCGTTAGACTTATAGACTCTGTAACAAAACAATTAATTAAGTGCGTCCTGCACGCATCAACCAACATACCAGCGCAATAA
- Protein Sequence
- MSYLTGNGSQSVNIYKLTNRTQEFEAESFHRRTCLHKSPSSSENKCHDRNNRKLIDKLSLTAACVISCISFKANSFKLRSDEAVPGFSSASPWPTLDLEWGRKLYPTAAPRTAGGLMFGLPPTAADMNQPRGPMTSLKEEPLGARAWMQPVVDQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSEADTTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQLIKCVLHASTNIPAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -