Ooch013999.3
Basic Information
- Insect
- Ormia ochracea
- Gene Symbol
- kn
- Assembly
- GCA_963402855.1
- Location
- OY727109.1:18804418-18807576[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-118 5.4e-115 385.0 0.0 205 385 1 210 1 213 0.99 2 2 2.6e-08 0.00012 20.6 14.2 423 505 214 303 210 315 0.71
Sequence Information
- Coding Sequence
- ATGCGCAGATTTCAgGTTGTCATATCCACGCAAGTGAGTGTTGAGGGGCCTTTGTTGGCGATATCGGATAATATGTTTGTACACAACAATTCTAAGCATGGACGCAGAGCTAAACGTTTGGATACAACGGAAGGTACAGGCAATTCCTCTCTGTCCATAACGGGACATCCCTTAGCACCGGACAGTACCTACGATGGTTTATATCCACCGCTACCAGTGGCCACACCCTGTATTAAGGCCATTTCGCCGAGCGAAGGTTGGACAACTGGTGGCGCCACAGTCATAATTGTTGGTGATAACTTCTTTGATGGACTACAAGTTGTTTTTGGTACGATGTTGGTGTGGAGTGAGCTGATAACCTCCCACGCCATACGAGTTCAAACACCGCCTCGTCATATACCGGGTGTAGTCGAAGTAACGTTATcttataaaagtaaacaattcTGCAAAGGCTCACCCGGAcgttttgtttatgtttCAGCCCTCAATGAGCCCACCATTGATTACGGTTTTCAGCGactgcaaaaattaataccaCGTCATCCTGGCGATGCCGAAAAACTAccaaaagaaatcattttaaaaagagcTGCGGATTTAGTTGAAGCTTTATATTCAATGCCAAGATCCCCTGGAGGATCGAGCGGTTTTAATTCATATGCTGGACAGCTGGCAGTAAGCGTACAAGATGGTAGTGGCCAGTGGACCGAAGACGACTATCAGAGAACACAATCGAGCAGCGTTAGTCCACGAGGAGGCTATTGCAGCAGCGCCTCTACTCCTCATAGTACAGGGGGTGGCTCTTACGGTGCCACATCTGGGACAGCCTCAAATGGTTATGGCCCTACGCCAAATATGGGTACATTGTCATCTTCACCTGGCAGTGTTTTTAATTCCACATCAATGTCCTCTACCTGGCACCAGGCTCTGGTACAACATCATCACTCGCATCCCCACCACTACCATCATCCGCATCAGCCTTGGCACAATCCAGCCGTGTCTGCAGCCACAGCGGCCGTTTAA
- Protein Sequence
- MRRFQVVISTQVSVEGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNSSLSITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDAEKLPKEIILKRAADLVEALYSMPRSPGGSSGFNSYAGQLAVSVQDGSGQWTEDDYQRTQSSSVSPRGGYCSSASTPHSTGGGSYGATSGTASNGYGPTPNMGTLSSSPGSVFNSTSMSSTWHQALVQHHHSHPHHYHHPHQPWHNPAVSAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01109082;
- 90% Identity
- iTF_01132709;
- 80% Identity
- iTF_01109082;