Olae005301.1
Basic Information
- Insect
- Orius laevigatus
- Gene Symbol
- stc
- Assembly
- GCA_018703685.1
- Location
- JAGWEN010001071.1:12534-17035[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.7 1.6e+04 -3.9 1.6 15 19 232 236 231 236 0.81 2 13 0.0025 22 5.2 17.5 4 18 279 293 267 294 0.90 3 13 0.86 7.8e+03 -2.9 1.2 6 10 320 324 319 324 0.90 4 13 2.6e-08 0.00023 21.1 12.1 1 19 330 348 330 348 0.97 5 13 7.4e-07 0.0067 16.4 10.5 1 18 393 410 393 411 0.96 6 13 3.8e-08 0.00034 20.6 13.5 2 18 453 469 450 470 0.91 7 13 0.0031 28 4.9 11.5 1 11 506 516 506 528 0.89 8 13 3.4e-09 3.1e-05 23.9 14.4 1 18 533 550 533 551 0.97 9 13 1.1 1e+04 -3.3 1.2 6 10 580 584 579 584 0.86 10 13 2 1.8e+04 -7.3 10.4 14 19 603 608 590 608 0.72 11 13 0.61 5.6e+03 -2.5 3.5 9 18 626 638 625 639 0.70 12 13 1.9e-06 0.017 15.1 11.5 1 18 644 666 644 667 0.82 13 13 0.77 6.9e+03 -2.8 11.7 4 16 674 687 672 692 0.75
Sequence Information
- Coding Sequence
- ATGGCGAACTGGGATTGGAACGGCGGAAACGGCTCTCATTACCAGTCACGTCGCAACTTCTCCGGCCATTCTAGTCAGAATTACTACGGCACCCATTTCTACGACCCTCAACATCAACGTTCCGACTACTTTTCCTACTCTCCAAACCCCCAAAACCCCCAGAACGGCTTCTACGACATGTTCGGGATGAACTATCAAGGCTACCAACCTCAAAACTACATTCCCACAATGGTTTATTCAAACAACACTCAAAATCGTACCGATTATCAAAACTACAATCAAAATTTCAACCCGAATCCATCCGAAAATGCGACCAGAGAGGCCAAAAACGAAAGGAAAGTGTTCAAAAAAGCGAAAAGTTTTCCGAAGAAAAGTTGGCAGCAGCAAGAGCGACCGCAGCAGCAAGAAAGAACGCCGCAGGCGAAGAAAAAGGCGCAGAATTGGGAAGCGAAGCCGTCCTATATCAAGAGGAACTTTGACGTCAAAAGAAACTGGAAGGAAAAACGCGATTCCATTTGCCAGAGAGAAAGACTCATAGATCAGCTCCACCGCGGCACCTTGGAATGCCTTGTCTGCTGCGAAAGAATCCGCCAGAACAACCCAGTCTGGTCGTGTTCAAACTGCCATCACATCCTGCACCTAAACTGCACCATAAAATGGGCGTCGAGCTCCAAAGATGAGAACGGATGGCGATGCCCTGCTTGTCAGAACACGTCAAAAACGGTGCCGACCGAATATTTCTGCATGTGCGGCAAAATAAGGAAGCCGGAGTTCATCCGAGGGGAGACGCCGCACTGCTGCGGCCAGATTTGCGGCAAAAAGAACAACTGCCCTCATCTCTGTACTATTCTTTGCCATCCCGGGCCGTGCCCCAACTGCTGCGCCAATGTCCAACGTTTCTGCGGCTGCGGTCGTACTGAAACCACCGTCATTTGCTCATCTACGGTAAAAATCGAATGCGAAAACGTCTGCGGTAAAAGTCTAAACTGCGGCATCCATCTTTGCGCTGAAAAATGCCATCAAGGTCCATGCCAAGCGTGCACCAAGAAGATCCACCAGAGATGCTTCTGCGGGACAAATGAGCGATCTTTGATCTGCGACGGGAGCGTCATTCCTGAAGAAATGGGCGGATCTTCCAAATACGAATGCGGTTCTCAATGTCCGCATATGCTATCATGTTCTGCGCACAAGTGTCCATTGAAATGCCACAGCGGGGAATGTCCTTTGTGCCTCTTTGACCCTTTGGTGATGAAAAAATGTCCGTGCGGGAAGCAAGAGATGCCCAAAAGGATGAAATGCACCGATGAAATACCACTCTGCGGCAAAATATGCGGCAAAGAACTCCCGTGCGGCGATGGACGTCATAGATGTCAAAGTGAATGCCACCTAGGAGACTGCCCACCATGCGAACAGGTCTCCAAAGTCAAATGTAGATGCGGCCTCATAGAAAAGGAGGTCCCGTGCAAAGAATCCGGTGACATCCTATGCCAGAAGAGATGTTCCAAGAAAAGGACCTGCGGGAAGCACAAATGTAATCAACTCTGCTGTATCGATGAGGAGCACATTTGCCCGTTTCCGTGCAATAAGAGTTTGAACTGCGGCCGCCACAGATGCGAAAGGTTATGCCATCGCGGACACTGTTCGCCATGTTTGGCTGCAAGTTTCGAAGAGTTGCACTGTGAGTGCGGTAAGTCGGTCATCTTGCCGCCGGTGGCGTGCGGTACTCGGCCGCCAGAATGCAACGAGCCGTGCTCACGAGACCACCCATGCGGCCATCCCCCGCTCCACAACTGCCACTCATACCCAGAATGTCCACCGTGCTCCGTACTCACCACCAAATACTGCTACGGAGCTCACGAAATGAGGAAAACGATTCCGTGCCACCAAGGGGAGTATTCGTGCGGCATACCATGCGGCCGGGCTTTAGAATGCGGACATAAATGTATCCGGAAATGCCACGACGGAAGCTGCTTGGAGAACGCCTGCAGCCAACCTTGCCCCAAACCTAGAGGATGCGACCATCCATGTTCTGCGCCATGTCATCCAAATAAGCCATGCCCGACCACCGCCTGCACAGCGAAATTGAAGATAACATGCGAATGTGGAAGAAGATCTGTAGTCCGCACCTGTTCAGAAAACAGCTCCGAATACCAGCGAATAGAAACATCATTGTTAGCCGCCAAAATCGCCGATGTCCGCTTAGGGAAGACAGTGGACACATCCGACGTATCCGTCATCGCTCGCAAAATGAGCTTGAAGACATTAGAATGCAACGACGACTGCCGCAAGCAAGAAAGGAACCTCCGCCTCGCCATAAGCCTTCAAATCGCGAACCCCGATTTGAGCGCCAAATTCGCTCCAAAGTATTCGGAAACGATGAAATCTTGGGTGAAGAAAGACGCCCGTTTCTGCGAGATGGTCCATGAAAAGTTGACGCAGTTAGTGCAGCTTTCGAAGCAGTCCAAGCAGAAAAGCAGGAGCTACTCTTTTCCTTCGATGAACGCTCCTAAACGTCAGTTTATCCATGAATACTGCGAGCATTTTGGAGTCGAATCCGTCGCTTATGACCCTGAGCCAAATCGCAACATCGTGGCCACCGCCTATAAAGAAAAAGTTTGGATGCCGAGCTACTCTCTTCTTGAAGTCGTACAACGTGAATCCGGACATAGGAAGGTCCCTTCGCTCCTCCCCTCGCTTAAAAAAGACACTTCCATCAAGGAGCCGACGAAATTGGTGCCGGTCCAAAAGAAGATTCCGGTCCAGCCGTCCGTAGCGAAACACGAACCCGAATGCGAAAGCCCGTGA
- Protein Sequence
- MANWDWNGGNGSHYQSRRNFSGHSSQNYYGTHFYDPQHQRSDYFSYSPNPQNPQNGFYDMFGMNYQGYQPQNYIPTMVYSNNTQNRTDYQNYNQNFNPNPSENATREAKNERKVFKKAKSFPKKSWQQQERPQQQERTPQAKKKAQNWEAKPSYIKRNFDVKRNWKEKRDSICQRERLIDQLHRGTLECLVCCERIRQNNPVWSCSNCHHILHLNCTIKWASSSKDENGWRCPACQNTSKTVPTEYFCMCGKIRKPEFIRGETPHCCGQICGKKNNCPHLCTILCHPGPCPNCCANVQRFCGCGRTETTVICSSTVKIECENVCGKSLNCGIHLCAEKCHQGPCQACTKKIHQRCFCGTNERSLICDGSVIPEEMGGSSKYECGSQCPHMLSCSAHKCPLKCHSGECPLCLFDPLVMKKCPCGKQEMPKRMKCTDEIPLCGKICGKELPCGDGRHRCQSECHLGDCPPCEQVSKVKCRCGLIEKEVPCKESGDILCQKRCSKKRTCGKHKCNQLCCIDEEHICPFPCNKSLNCGRHRCERLCHRGHCSPCLAASFEELHCECGKSVILPPVACGTRPPECNEPCSRDHPCGHPPLHNCHSYPECPPCSVLTTKYCYGAHEMRKTIPCHQGEYSCGIPCGRALECGHKCIRKCHDGSCLENACSQPCPKPRGCDHPCSAPCHPNKPCPTTACTAKLKITCECGRRSVVRTCSENSSEYQRIETSLLAAKIADVRLGKTVDTSDVSVIARKMSLKTLECNDDCRKQERNLRLAISLQIANPDLSAKFAPKYSETMKSWVKKDARFCEMVHEKLTQLVQLSKQSKQKSRSYSFPSMNAPKRQFIHEYCEHFGVESVAYDPEPNRNIVATAYKEKVWMPSYSLLEVVQRESGHRKVPSLLPSLKKDTSIKEPTKLVPVQKKIPVQPSVAKHEPECESP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -