Olae017169.1
Basic Information
- Insect
- Orius laevigatus
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_018703685.1
- Location
- JAGWEN010001782.1:4937-11770[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 1.8e+04 -5.0 1.9 15 19 153 157 153 157 0.85 2 18 0.13 1.1e+03 -0.3 0.4 4 10 188 194 187 194 0.95 3 18 6.5e-07 0.0058 16.6 15.7 1 19 202 219 202 219 0.99 4 18 0.35 3.1e+03 -1.7 0.4 6 10 245 249 244 251 0.88 5 18 1.2e-07 0.0011 19.0 15.8 1 18 255 272 249 273 0.85 6 18 1.6e-07 0.0014 18.6 13.0 1 19 308 326 308 326 0.99 7 18 1.2e-06 0.011 15.8 14.6 1 18 361 378 361 379 0.98 8 18 2 1.8e+04 -4.9 2.0 6 10 403 407 403 407 0.95 9 18 4.4e-08 0.0004 20.4 14.5 1 18 413 430 413 431 0.97 10 18 4.2e-11 3.8e-07 30.0 13.8 1 19 440 458 440 458 0.98 11 18 0.42 3.8e+03 -2.0 1.3 5 10 485 490 485 490 0.92 12 18 0.00046 4.1 7.5 6.4 10 19 504 513 498 513 0.91 13 18 0.00035 3.2 7.9 6.1 1 12 522 532 522 532 0.96 14 18 1 9.3e+03 -3.2 2.1 14 19 559 564 559 564 0.85 15 18 1.7 1.6e+04 -3.9 15.2 1 18 600 619 590 620 0.85 16 18 0.12 1.1e+03 -0.3 15.1 1 19 629 646 629 646 0.93 17 18 4.1e-05 0.37 10.9 11.5 1 18 691 710 691 711 0.90 18 18 1.6 1.4e+04 -3.8 0.7 6 10 737 741 736 741 0.87
Sequence Information
- Coding Sequence
- ATGGGTGAACCGAGGCGAGATGTGCGGAATCCTTGGGGACGCCCGGGTAAAGTCGAGGCTGCTAAAAGTTCCGAGGAAAAATTCAAAGAGGCTCGACTCAAAATGCAGAAATCCGTCCAGAAGCATCTGCAGAACGATTACGAGTCGTCCTCCGAGGAAGAGGAACTCGAATCCGGCAACATTTTAGATTCCGTTTTGAAGAACTACAGCAGCTCGGGAGGTCAGCTCGAGGATTTAGGAAGGACGCAGAATGTTCTGGAAGCTTCTTTTCGTTCGGGCTCAGCAGTCTGCCTCATCTGCATCGCCCTCATCAAAAGGAGCGAATCGATCTGGTCGTGCGAATCCTGCTTCGGCTTCTTCCACCTCAACTGCATCCAAAGATGGGGCAAAGACAGCGTCTCGCACCAAAAAATCGCCGAAGAACCGTACACAAAATCCAAAAATTATTGTTGGTATTGCCCAAAATGTCGAAAAGAATACGACTCAGAGAATATTCCTTCAAAATATGAATGCTTTTGCGGCAAAAGTACGGATCCAGTTTTCCAGCCGTGGCTCGTGCCGCATTCGTGTGGCGAAATATGTAATAAAAGACTTATCCCTGATTGTGGTCATTCTTGTTTACTTCTTTGCCATCCAGGTCCTTGTCCGAAATGTCCCAAAATGGTGAAGACGAGATGCTACTGCGGTCAAAGTGATGCGATGCCACGGCGATGTTATGAGAAGGAATGGTCCTGTGAGAAGACATGCGGTAAAAAGTTGCCGTGCGAAAAGCATAAATGTGAGGCGAAATGCCATTCAGGGGAGTGTCCGCCGTGTGATAAAACCTCGTCTATGAAATGCCTCTGCGGCAACAAAACCCAACGAGTGGCCTGCTCTCAAATTTCATGGCAGTGCGGTAAAGTGTGCGGTAAAAAACTCGAATGTGGCGAACATTTGTGCGAAATCGTCTGCCATAAAGGGGAGTGCGGTGAATGCCCTTTGTCGTTACCGAGGTCTTGCCCATGCGGTAAAGAAACTACCGTCCTCCCTTGCACCAAAGAGGTCACCACTTGCGGCGACACTTGCTCCAAACTTCTCTCGTGCGGACTTCACCGATGCTCCCAGCGATGCCACAAGCCACCGTGCGGCCCTTGTATGGAAATACTGGAAAAACCGTGTCGTTGTGGCGCACATGTCAAAGAGGTACCGTGCGACAAAGAATATCTCTGCGAAAAGAAATGCAAACTAAGGAGGGACTGTGGGGTTCACAATTGCAGCAGAAAGTGCTGCGATGGTAATTGTCCTCCATGCTATGCAATATGTAAGAAGACCCTCAACTGCGGTAATCATAAATGCGAGTCCGTTTGCCACCGCGGTCCTTGCTATCCATGCCAGCAAACGGTTCTTCTCACATGCTCCACCTGCAGCCACCCTCTCACCACAGTACCGTGCGGCGTCAAAAAAAGAAGGTTCAAATGTAACCAACCGTGCAGAGCACCAAAAGACTGCGAACATGAAAACAAGCATAACTGCCATTTCGGAGAATGTCCTCCATGCCGTAAAGTATGCGGAAAACAACTTCCTTGCGGACATCGCTGTCCGAAAATGTGTCACTCAAAAGTGGTCGTGTGTTCGGATCCAAATTTCAAGGCTGCGACACCCTTAGATGTCGCTCCTTTGGAAGTCAAATCGCTCGATTGTCCACAATGTACTGAATTGGTGGAAGTTTCTTGTTTGGGAGGACACGAGCAGCTTTTCCTTCCTTGTTACCGCGCAAGATCCGAATCCTGCGGTAACCCATGCGGCGCTACACTCGAATGTACCAATCACGGATGCACCCTCCCTTGCCATTCAGAAAAGGATCCCTGTGAGATCTGTCAAGCGGAATGTTCGCTTGAAAGAACCTGCAGCCATCCTTGTACTGCCGGCTGTCATCCATCACCGTGTGCCGAGTGCAAAACGATCATCAAACTTCGCTGTCATTGCTCGCTTAATGTTATCATCATCAACTGTCACGAGTGGACCAAACTTTCGGAAAATGAGCGAAATATGAAGCTCTCATGTGGAAACCAATGCCCCAAACATTATCCATGCGGCCATAGATGCACCACAAACTGTCATGAAGGTGTCTGTCCAAAAGCGGATTCGTGCAAGAAGAAAATGAAGGTGAACTGCGAATGTAAACGGATCAAAAAAGACATCGCTTGCTACTTAAAGACGACCGTAGAATGCGACGAAATCTGCAGAAGCCTCAAAACTCAAGAAGACATCAACAAGCGAAAAGAACTTGAAGAGAAGTCGCTAGCGGAGCAGATGAAAAACCAAAAGGAGCTTGAGTCGTACGAAAAACGTTTCCATGGAAACAAAAAGCAGCGCCCGAGAAAACGTCATTGTGAAGACGACGCGCAACCTACTTTTATAACGAAACACAAATATTATGTCTTTTCATTTATATTTTTCACATTTTCTGCAATTATTTATTCGTTTTTTATGTAA
- Protein Sequence
- MGEPRRDVRNPWGRPGKVEAAKSSEEKFKEARLKMQKSVQKHLQNDYESSSEEEELESGNILDSVLKNYSSSGGQLEDLGRTQNVLEASFRSGSAVCLICIALIKRSESIWSCESCFGFFHLNCIQRWGKDSVSHQKIAEEPYTKSKNYCWYCPKCRKEYDSENIPSKYECFCGKSTDPVFQPWLVPHSCGEICNKRLIPDCGHSCLLLCHPGPCPKCPKMVKTRCYCGQSDAMPRRCYEKEWSCEKTCGKKLPCEKHKCEAKCHSGECPPCDKTSSMKCLCGNKTQRVACSQISWQCGKVCGKKLECGEHLCEIVCHKGECGECPLSLPRSCPCGKETTVLPCTKEVTTCGDTCSKLLSCGLHRCSQRCHKPPCGPCMEILEKPCRCGAHVKEVPCDKEYLCEKKCKLRRDCGVHNCSRKCCDGNCPPCYAICKKTLNCGNHKCESVCHRGPCYPCQQTVLLTCSTCSHPLTTVPCGVKKRRFKCNQPCRAPKDCEHENKHNCHFGECPPCRKVCGKQLPCGHRCPKMCHSKVVVCSDPNFKAATPLDVAPLEVKSLDCPQCTELVEVSCLGGHEQLFLPCYRARSESCGNPCGATLECTNHGCTLPCHSEKDPCEICQAECSLERTCSHPCTAGCHPSPCAECKTIIKLRCHCSLNVIIINCHEWTKLSENERNMKLSCGNQCPKHYPCGHRCTTNCHEGVCPKADSCKKKMKVNCECKRIKKDIACYLKTTVECDEICRSLKTQEDINKRKELEEKSLAEQMKNQKELESYEKRFHGNKKQRPRKRHCEDDAQPTFITKHKYYVFSFIFFTFSAIIYSFFM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -