Olae005965.1
Basic Information
- Insect
- Orius laevigatus
- Gene Symbol
- pnr
- Assembly
- GCA_018703685.1
- Location
- JAGWEN010000129.1:94650-98637[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-17 1.6e-13 50.0 2.2 1 35 270 303 270 304 0.97 2 2 9.2e-19 3.3e-15 55.4 5.4 1 35 327 360 327 361 0.98
Sequence Information
- Coding Sequence
- ATGGACGAGCTTTTCCAGGGGCTCTTCACGATGGACGAGGAGAGCAACGATACCGGGGCGGCTCCAGCTCAAGAGACCGGGGTCATCAGGAGCCAGCAAGGCGTAAGAACAATCACAACTTCCGGCACCATCACCACCAGCCCCGAAAACCACGAATCTTCACCATCTCCTGAAAACCACTACGAAACGGCAAAAAATGAATACGAGGCATACAAAGTTCAAGAAATGCCTTCAAGATCGCCTATGATGCAAGAAGAAAAAATTCTTCAAGAGCAACCCTACGAAGAAAACGGTTATCCGACTATGCAAGGGAGGTTCAGCCCTTCGCGGTACTATCAGGAAAACGCGAACGTCAAATATGAAAGGGAAGAAAAGCCGATTTTGCCTGAAAATGCGTCCTACGTGACCCTTGAATCGGTCTGCCAGCCTGGCGCTGGTGGGCAAGGATACCCAGCGCAAGACGAATATATGGCCACTTATCAGATATTCAAAGACGAAAGCGAAGAACAGCCCATCAACAACGGCGGAATTAAAGAAATCTACTACCAACCACAGCAAAATTACAATCAGTCGACATCCTCCGCTATTCATCAACAACCTCAGATCGTCTACAGCGAATTTCCATTTCCGAATAAACAATTGATTTATAATAATTGGAATCCACCTCAAGAATATGTCTTAAACGCTCAGCCAGGCGTTAGCGCAATTCCTCAGCATCAAAACGAAGTCACGCAATTTTATGATTCGCAAACTTGGCAAGTCGAGGATAACTATGAGGCCGGTCTGCTCTCTTCGGAAATCAAAGAATGCGTGAACTGCGCCGCGAGTAAAACGCCGCTTTGGAGGCGGGACATCAGCGGTCACCATCTCTGCAACGCCTGCGGACTCTACAACCGCATCAATGGAGTCAACCGACCTCCGGTACGCACCCACCACAAGAAAGTGGCCAACATGGGAAACAGAAGAGCAGGAGTAAGCTGTGCAAATTGTAACACTTCATCTACAACATTGTGGAGAAGAAACAACACGGGAGAGCCAGTCTGCAACGCATGCGGTCTTTATTTTAAGCTTCACGGGGTAAACCGGCCATTAACTATGAAAAAAGACGGCATACAGACGAGAAAACGAAAACCAAAGAATCCGATGAGCTCAGGATCGACTAGTCCAAAAAACGAAATGAAACCACACGTTGGCAAACTTGACAATCGTGTCTACATCGATAATGAATCCATGGACAACCATTACATGCCACCGAGCCAACTTTACCTCTCGCAACCTCCTTTTTTAAGCAAACACCCAAATGCAAACTTAGAGGGTCTGTCGCACAGCGTGATCATCCCGACGCCAAATCAAGATCAACATAGGACTGAATAA
- Protein Sequence
- MDELFQGLFTMDEESNDTGAAPAQETGVIRSQQGVRTITTSGTITTSPENHESSPSPENHYETAKNEYEAYKVQEMPSRSPMMQEEKILQEQPYEENGYPTMQGRFSPSRYYQENANVKYEREEKPILPENASYVTLESVCQPGAGGQGYPAQDEYMATYQIFKDESEEQPINNGGIKEIYYQPQQNYNQSTSSAIHQQPQIVYSEFPFPNKQLIYNNWNPPQEYVLNAQPGVSAIPQHQNEVTQFYDSQTWQVEDNYEAGLLSSEIKECVNCAASKTPLWRRDISGHHLCNACGLYNRINGVNRPPVRTHHKKVANMGNRRAGVSCANCNTSSTTLWRRNNTGEPVCNACGLYFKLHGVNRPLTMKKDGIQTRKRKPKNPMSSGSTSPKNEMKPHVGKLDNRVYIDNESMDNHYMPPSQLYLSQPPFLSKHPNANLEGLSHSVIIPTPNQDQHRTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -