Basic Information

Insect: Orius laevigatus
Gene Symbol: -
Assembly: GCA_018703685.1
Location: JAGWEN010000845.1:41278-48234[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0001 0.0061 17.0 2.0 1 23 369 391 369 391 0.98

2 10 2.8e-06 0.00017 21.9 2.1 1 23 397 419 397 419 0.99

3 10 0.39 24 5.7 2.2 1 20 425 444 425 446 0.89

4 10 0.00015 0.0091 16.4 1.2 1 23 450 473 450 473 0.97

5 10 0.00026 0.016 15.7 0.1 2 23 480 501 480 501 0.95

6 10 3.2e-05 0.002 18.5 0.8 1 23 507 530 507 530 0.96

7 10 0.00044 0.027 15.0 0.6 1 20 534 553 534 557 0.91

8 10 8.2e-06 0.0005 20.4 0.9 1 23 563 585 563 585 0.98

9 10 0.0017 0.1 13.1 0.4 2 23 593 612 593 612 0.96

10 10 0.0017 0.1 13.1 3.2 1 23 618 641 618 641 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0001	0.0061	17.0	2.0	1	23	369	391	369	391	0.98
2	10	2.8e-06	0.00017	21.9	2.1	1	23	397	419	397	419	0.99
3	10	0.39	24	5.7	2.2	1	20	425	444	425	446	0.89
4	10	0.00015	0.0091	16.4	1.2	1	23	450	473	450	473	0.97
5	10	0.00026	0.016	15.7	0.1	2	23	480	501	480	501	0.95
6	10	3.2e-05	0.002	18.5	0.8	1	23	507	530	507	530	0.96
7	10	0.00044	0.027	15.0	0.6	1	20	534	553	534	557	0.91
8	10	8.2e-06	0.0005	20.4	0.9	1	23	563	585	563	585	0.98
9	10	0.0017	0.1	13.1	0.4	2	23	593	612	593	612	0.96
10	10	0.0017	0.1	13.1	3.2	1	23	618	641	618	641	0.95

Sequence Information

Coding Sequence: ATGTTGCAGCCTACGGAATTGGATTCGCCCAACGAAGCATTAAATTTTTTAAATTCTATACAACCTAATGCTCCAGAATGGAATTTGTTGTTGCAAGAAAGTACGAATCTTTTCGTCCCTGAAAAAGAGACATTGAACCCAGCTTACCATTACAACAACACCCTTTCCGTGGGTATGCCCGATCAAAACTGGACCAACTATTATCCACCAACCTATGACGAGCGAGCTGTACAGGATGAGCCGAAAGATCCCCTCAACGACCTCCTCCTCTCTCCAAGAACGAGCAAAGACTGCAGATTCAACTGCCTCCCTTACAGCTCCTGCTCGCAAGACTACTTTATCCCTTATTCCACGATGGGAATCAGCGACGACATCAGAAATCAATATCCTGAAGATCCACGATATGATATTCCTAAACTTCCGGACATCGGATCGGACATAACGAATATCATTGATGTCGCTGATAACGTCGAAAATGAGTTTTTAGAAGTCGTCGATACTGATGACGAAAGCGAAATCATCGTCGAAGACTCGGATACCGAAAGCGAAATTTCAATTAGCGACGTAGGCCCTTATTTAGCAGAGCAAGAACAAGTCCAGAAGCTTTGCTGCATCGTATGCGGAGTCCACTGTAAAGAAAGTACCGTCTCGAATTTTACACATCTGAATACAAATTTCCCTCTAACGTACATTACGAAGACCCCGATCGTCATAAAACTTGTCGAAATAATCCCTTTAGAATGTCAAAATTTGGTAAAATACGAGCGAGTGCTGATCTGCCGCCGGTGTCTCAATTTGATCGACGCCGTCGAAAGTTTCGAGTGCAAATTGGTGGAAGCAAAGCAAGAAATCTGCGGCTTCCTTTCTAAACCACACAGGGTCGACTTTCAAACGGAATTTTCAAACTTCAACAAATTAATCGACTGCGGCAACATCGAGTTTCAAGATGTCCAGCCGGCAACCATATTTGAAAATGTCAGTCAGCTTCAGATCGTCGAAACGTTGAAAATCCCTGAAATAGTCGAAAAGACTGAAGAAAAGACTGAAAGTGAAAAACCAACCGAAAAACCAATTGAAAAACCAAAAGAGAAAAACAAAGGAACCTATCAGTGCGACAGATGTGGTCGTTTTTACAGCAATAAAAAGAAACTCGACAATCACTTAGCGAAACATTTGGGACTCTTCAAATATAAATGTGAACACTGCTCCAAGGGATTTATGAAAGAATCAAATTTACAAATTCATCTCCGGATCCATAAAACGGAAAGAAAATTCCAATGCCATAGTTGCCCACTTAGCTTTAAAATTGAGACTGAATATGCATCCCATAGTTGTACGGAGATGCGATTTATGTGCGACAAATGCCCTAAAATATTTAACACGGATGAAAAGTTTAAAAATCATCAGAATTCCGTTCACGGAGAGAAGACAAAGAATGTTTGCAAAGTTTGTCTGAAAGAGTTCAAATACCCGAGTGATCTAGCGAAACATGCGGCGTCGCATGAGACTGATAAGAACTTCGTTTGCCCTCATTGTGAAAAAGGCTTCAAAGGGACCACCCAGCTTAACCAACACGTCCGACTTGTTCATGAAAAATGTTTTTCGTGTTCGCTCTGCAATTTGGAGTTCAAGTCGTCGAAAGAATTGAGGAAGCATGCGGTCGACGAGCATGGGAGGAGCGACAAGTACGAGTGCGACAAATGCGAGAAGACGTTTGTCGAAAAGCGATATCTGAGCGCGCATCAAAAAGTTCATGCTGGCACCGCCAAAACCAACACCTGCCCTATTTGTAATAAGACTTTAAGGTCGAACCTGAAGGCCCACATGATGGCTCATTCAGCGGAAAAGCAATTTCACTGCGATATCTGCGACATTAAATTCACTTTCAGAAGCGGACTCGACAAACACAAAAAGCTCAAACATCAATCAAAACAGAAGCAATAA
Protein Sequence: MLQPTELDSPNEALNFLNSIQPNAPEWNLLLQESTNLFVPEKETLNPAYHYNNTLSVGMPDQNWTNYYPPTYDERAVQDEPKDPLNDLLLSPRTSKDCRFNCLPYSSCSQDYFIPYSTMGISDDIRNQYPEDPRYDIPKLPDIGSDITNIIDVADNVENEFLEVVDTDDESEIIVEDSDTESEISISDVGPYLAEQEQVQKLCCIVCGVHCKESTVSNFTHLNTNFPLTYITKTPIVIKLVEIIPLECQNLVKYERVLICRRCLNLIDAVESFECKLVEAKQEICGFLSKPHRVDFQTEFSNFNKLIDCGNIEFQDVQPATIFENVSQLQIVETLKIPEIVEKTEEKTESEKPTEKPIEKPKEKNKGTYQCDRCGRFYSNKKKLDNHLAKHLGLFKYKCEHCSKGFMKESNLQIHLRIHKTERKFQCHSCPLSFKIETEYASHSCTEMRFMCDKCPKIFNTDEKFKNHQNSVHGEKTKNVCKVCLKEFKYPSDLAKHAASHETDKNFVCPHCEKGFKGTTQLNQHVRLVHEKCFSCSLCNLEFKSSKELRKHAVDEHGRSDKYECDKCEKTFVEKRYLSAHQKVHAGTAKTNTCPICNKTLRSNLKAHMMAHSAEKQFHCDICDIKFTFRSGLDKHKKLKHQSKQKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -