Olae009737.1
Basic Information
- Insect
- Orius laevigatus
- Gene Symbol
- -
- Assembly
- GCA_018703685.1
- Location
- JAGWEN010000038.1:359500-365186[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 7.8e-05 0.0047 17.3 1.0 1 23 127 149 127 149 0.95 2 29 8.6e-06 0.00052 20.3 1.3 1 23 159 181 159 181 0.98 3 29 0.0009 0.055 14.0 0.8 1 23 202 225 202 225 0.97 4 29 0.018 1.1 9.9 0.4 2 23 232 254 231 254 0.95 5 29 0.031 1.9 9.1 0.7 1 23 312 335 312 335 0.96 6 29 0.004 0.24 12.0 0.2 1 23 363 386 363 386 0.96 7 29 0.25 15 6.3 0.2 3 23 394 415 393 415 0.95 8 29 0.0024 0.15 12.6 0.4 2 23 484 506 483 506 0.96 9 29 6.8 4.1e+02 1.8 0.4 1 23 523 546 523 546 0.84 10 29 1.1 66 4.3 0.4 2 14 553 567 552 577 0.76 11 29 0.0045 0.27 11.8 0.1 2 23 586 608 586 608 0.95 12 29 0.0045 0.27 11.8 0.5 1 23 614 637 614 637 0.94 13 29 0.00075 0.045 14.2 2.6 1 23 645 667 645 667 0.97 14 29 0.004 0.24 12.0 1.0 2 23 724 746 723 746 0.95 15 29 0.0003 0.018 15.5 2.4 2 23 753 774 752 775 0.94 16 29 5e-05 0.003 17.9 2.7 1 21 785 805 785 806 0.95 17 29 6.7e-05 0.004 17.5 1.7 1 23 820 843 820 843 0.97 18 29 0.058 3.5 8.3 2.0 1 23 846 869 846 869 0.96 19 29 3.2e-05 0.0019 18.6 0.6 2 23 876 897 875 897 0.97 20 29 0.18 11 6.8 2.9 1 23 905 927 905 928 0.93 21 29 1.6 97 3.7 0.4 3 23 936 957 933 957 0.89 22 29 0.0001 0.0062 16.9 0.5 3 23 967 987 966 987 0.97 23 29 0.00015 0.0093 16.4 0.7 1 23 992 1014 992 1014 0.97 24 29 0.0023 0.14 12.7 0.2 1 23 1072 1094 1072 1094 0.98 25 29 0.025 1.5 9.4 0.3 2 23 1142 1164 1141 1164 0.96 26 29 4.2 2.5e+02 2.4 1.3 2 23 1205 1226 1204 1226 0.92 27 29 0.0012 0.073 13.6 0.2 2 23 1285 1306 1285 1306 0.97 28 29 0.022 1.3 9.6 0.3 1 23 1312 1335 1312 1335 0.90 29 29 0.044 2.7 8.7 0.2 1 20 1340 1359 1340 1361 0.93
Sequence Information
- Coding Sequence
- ATGGATTTCCAAGTACTCTGCAGGTTATGCGGAACAGACGACTCGTTGAAAATCGACATTTTCGGAAAAACAGGACAGGAAAAACACCTTGCAGATAAAATCTCCGCCTGCCTCCCCTTCGAGATTTCAGAAAATGATCTCTATCCAAAATCCTTATGCTTCAAATGCATACACGCTTTAGATTCGTTTTTTGACTTCCGAAAAATATGCATCGACACGACAGCCAGATTTGAATCCGTCATCCGTTCAAGGTCTGATAAGATTAAAGAAGAAGATATAGAAGGCGAGGAAGACCCACCTAATCCTGCTGACTTTTTAGAAGCATGCCTTGGTGAGTCTCCCAGTCGCAATGGAACGAAAGAAGAAGATGAAGGGACGTTCGACTGTAAAATCTGCGGAAGGCTTTTTAACTCAAAAAGCTCGCTTACAATTCATGCAAAATTCCATCAAGAGAAAAGAGATGAAAAAGAAAGCTATTCATGTTTTGTCTGCGATAAAGTTTTCTCAAGCAAAGGTCACCTGGCACTTCATTCTCGTGTACATATAGGAGAAACGAGTGCTCCTCCTTTTAATTTTTCCAGGCCTCCAACACAGATAAAGCTGTATCGCTGTGACCTCTGCAGTAAATCGTATTCAATGGCGAAACATCTCTGGGGGCATGTGAGCACAGCACATAAAGGCGACCCTCAAGTAACATGCGGCATCTGCCTAAGAACTTTCTCCTCCATTACCAACCTGGACCTTCACAAAAAAGTCAAGCATAATGAACTCTCAATTACCTCAAAAGGAAATGAAGAAATGGATTTGATGGAGAAAGAAGAGAGCCCGACTAATAAAAGGAAGAGTTCAAAACCGAGAAAAATTGAGCGAGAACCTGGGAGCAATTCTGATGAAAATGATGAGGAAGAGGACATTGGGTTACCTCGAATGCATTATTCTTGTTATTTATGCTCAGAGAAATTTGACGACACCCAAGGTCTTACTGACCATTTGCAACAAACCCATGGTTATGACGGAAGCTTAGATTTTAACAACGCGACCATGGAAAATGATTATGCAGAAAGGATGGTGGAAAACGAGACGATGTTTAGGTGCGAAATATGCATACGGGAGTTCAACGATAGGGCCAGTCTTTGGCTCCATATGCTCTACTCGCATAGAGATGAAGCCTCAAAAGCGTGTGGAATCTGCCTTAAAATATGCGAAGACAATGACAGTTTATCAATGCATGTGGAAATGAGTCATCCAAGAGATAAAACAGAGCAGAGGCGATACAGCTGCCAGGTCTGCGCCCGTCAGCACGATTCCAGAAAGAAGTTAGTCACACATGCTAAAATCCATAAGCTAATTGATGAAGACGGTAACCTCGTCGATCCTGAATTAGTCGTCGTCCTTAACAGCGAATTTTATCATGAATCGCAAATGAGCACTGATGATGGTTTCATGTCAAGTTGTGACGTTTGCTTCAAAATTTTTGAAAATGAAGCCAAATTAGTGAAGCATAAACGAAGCGCGCATCGTGAAGGAAGTTCTTCTGCGAATTCGACTGGAAATTATAACTTTTTCTTTGTCTGCGAGCTTTGCGGTTTGTCGCATTTGTCAAGGTCGGAAAGATGGAAGCACATGGCTTCGCTACATGCTGGAGATCCGACGATCACATGTCAAGTCGAAGTATGCGGCAAAGTCTTTCCGACTAGCACCATAAAGAACGAACACGAATCAAGCCACCATGCTTTGCAAGGCCAATATCCTAACACGTGTGAGATCTGCGGTAAAATGTGGAAAACCAGAGTGGAATATTGGAAGCACATGATGGGCGTACATTCAGATTATTTACCATTTATATGTGGTGTTTGCCTAAAAGTGTTCTGCAACATTTCCTCTCTAGTTAGCCACGTTAAAGATCTGCATTTGCCATTAAACGGTGGTGATTTTTGCTGCGATATATGCGGTAGGCCATATTCGAAAATTTCAAAAATGACTCGTCATCGAAAAATCCATTATGTGCTCGACACACCTCCGGAAATTCAAGTTCTGTTGGAAAATGCTTCAACCGACGAACCTAAAGTTACGCCTAAATTGATATGCGATCTGTGCGAAGGGAGCACTGTTGAGTATGAAGATTTTGAAGCTTTGGGCAAGCATAGGTTTGACAACCATCAAGTCATGCCGTGCGATTTATGCTCGAAGTATTACGGTCGCACTTCTCATTTGTGGAAACATGTCAACAAAATACATAAAGGGCATCCAGACATAACATGCCCAACGTGTGAAAAGACATCGGCTTCCAAGTCTCACCTTCTTACTCACATTGCTAAGCACCACAAAAAAGAAAATGCCGAAAATGACATCCATCCTTGTGAAAAATGCAATAAAGTTTTCAGCCAGAAGCCTCTTTTGAAGAAACATCAAAAGCATTGTCTGATGCCGAAAGAATCTGCACCACCAGATGGGAAGTATGACTGCGAGCGATGTTCCAAATCGTTCACCGCTCAAAAATTGCTTTACAAGCACATTAGGACATCGCATTTGACCTACACTTGTGAAATATGTTTCACAAAAGTCGAATCAAGGACCGACCTATTCGAGCACATTTGCCAAAACCACAGCGACCATCCCGATGTCAAGTGTGCCCTTTGTGAAAAAATATTTAGAAACAAAATAGACTTGAATCGCCATCAAAGAGACCATCGTCAGTCCTACCACCAGTCGCACATATGCGTCTTTTGTGCCGAAATCGTCTCAAGCAAGATCAAGCTGAGACAGCACATGAAAAAGCATCACGGAAAGTTTACAAAATGTCTTTGTGCAATTTGTCTCAAAGCTCTTCCTAGCTTTCAAGAGCTCAAAAAGCATGTCGAGGCCGATCATAAGGTAGCTTTAGGTCGTCCTAATGCATGTCCGGTCTGCGGAAAACCGTGTTCCAACAAAAACAAATTAATGGAGCACATCAAAGGTCACAGCATGTATTTCCATCCTTGTAAAATCTGCCTTCGAATATTTGCCACGAAAGATGATTTAACTGAGCATCTAAACAATCATCCTAGCGATGTAGAAGAAGATGATCATGTTGAAGAAGTTGAATTGGATGCGAACAGCATCATGGACATCATAGGTGCTCAAGAAGGTGAAAGAGTCTGCGTCAAAAGGCAAATCGACGACGATAAAGAAGAAACAATCACAGTACCACCGATAAAAAAGCCAAAAACCGAATTCCCGTGTGATGTCTGTCAAGAAACGTTTATTTTCATGGACGACTATTTGAATCACCAAGAAACCCACAAAGAGCCGGAAAGCATCTTAGAAAAAGCTTTGATAGAAAAAGTTGAAAAAGTGGAAAAGTCTCCACAGCACATTCCACAATATGACATGGGGAGGATAAGAAACAACAGAAAAGTTTATTGTAATGATTTCACTCCTAGCCAGTGCGAAATTTGCGGAAAAGTTTGGCCCGCGAAAAGACATCTGTGGCAACACTTAATCCGTTTTCATCGCATCCAGGCCGGAACTTCATGCGGCATTTGCTTAAAACTTTGTCAAAACTATGTCGAGTTGAGTAACCATTTGGTTTTGGAGCATCCCAACAATTTCGATTGCGACGGAACCAACTTATCATGCAGAGTCTGCGGTAAATACCACAACGCAAGGTCCAAACTTCAGAACCACGCTACAATCCATGTCGGCCACGAAGAACGTGCGCAAGTAAGCTCCCACCTTTGTCTTCTTTGCCAAACATCATTTCCGCTCTTCAAACTTTTCTGCGAACACAACAAAGAGGTCCACAACTTATCCGAAAACACCGAAAAAATCGAAATTCCACCTCAAGACACCGAAAAGAAGTTTCCTTTCAACAGTTGTGACATTTGCTCATTAGTCTTCGCCAGCGAGCAAGGCTTGATCAACCACAAACGGACTCATACTCAAAACGACAACTACAAATGTGGACAATGTGGCGAGCTATTCAATTCCGCCAACCTTCTATCATTACATAAAGACGAAAAACACCGCGGAACCGAATTCGTGTGTGCCGATTGCAAATCGAACTTCACAACTTACGTCCAACTAACAGAACACAACAAAATTTGTAAATCGAAAATGAACAAAATGGTTTTAGAAGATGACGAGTATGAAGAAATTGAAGAAGAAGAAGATGAAGAAGTCATAGAAGAAGAGGAAGAAGAAGAAAGTGACTCTGGAAGTTTATCAGGTTCTGAAAAGTCTTTGAATTCAGATTTTTCTGACGATGAAGAAGAGGTGGAAAGCAACGTTACCCAAGAAGAACCTCGAGCCATCGAGGCTTATGTTGTTAATGACAACATGGTCGAAGTAGTCAAAGTTGATATATCAGACGAAAAGTAA
- Protein Sequence
- MDFQVLCRLCGTDDSLKIDIFGKTGQEKHLADKISACLPFEISENDLYPKSLCFKCIHALDSFFDFRKICIDTTARFESVIRSRSDKIKEEDIEGEEDPPNPADFLEACLGESPSRNGTKEEDEGTFDCKICGRLFNSKSSLTIHAKFHQEKRDEKESYSCFVCDKVFSSKGHLALHSRVHIGETSAPPFNFSRPPTQIKLYRCDLCSKSYSMAKHLWGHVSTAHKGDPQVTCGICLRTFSSITNLDLHKKVKHNELSITSKGNEEMDLMEKEESPTNKRKSSKPRKIEREPGSNSDENDEEEDIGLPRMHYSCYLCSEKFDDTQGLTDHLQQTHGYDGSLDFNNATMENDYAERMVENETMFRCEICIREFNDRASLWLHMLYSHRDEASKACGICLKICEDNDSLSMHVEMSHPRDKTEQRRYSCQVCARQHDSRKKLVTHAKIHKLIDEDGNLVDPELVVVLNSEFYHESQMSTDDGFMSSCDVCFKIFENEAKLVKHKRSAHREGSSSANSTGNYNFFFVCELCGLSHLSRSERWKHMASLHAGDPTITCQVEVCGKVFPTSTIKNEHESSHHALQGQYPNTCEICGKMWKTRVEYWKHMMGVHSDYLPFICGVCLKVFCNISSLVSHVKDLHLPLNGGDFCCDICGRPYSKISKMTRHRKIHYVLDTPPEIQVLLENASTDEPKVTPKLICDLCEGSTVEYEDFEALGKHRFDNHQVMPCDLCSKYYGRTSHLWKHVNKIHKGHPDITCPTCEKTSASKSHLLTHIAKHHKKENAENDIHPCEKCNKVFSQKPLLKKHQKHCLMPKESAPPDGKYDCERCSKSFTAQKLLYKHIRTSHLTYTCEICFTKVESRTDLFEHICQNHSDHPDVKCALCEKIFRNKIDLNRHQRDHRQSYHQSHICVFCAEIVSSKIKLRQHMKKHHGKFTKCLCAICLKALPSFQELKKHVEADHKVALGRPNACPVCGKPCSNKNKLMEHIKGHSMYFHPCKICLRIFATKDDLTEHLNNHPSDVEEDDHVEEVELDANSIMDIIGAQEGERVCVKRQIDDDKEETITVPPIKKPKTEFPCDVCQETFIFMDDYLNHQETHKEPESILEKALIEKVEKVEKSPQHIPQYDMGRIRNNRKVYCNDFTPSQCEICGKVWPAKRHLWQHLIRFHRIQAGTSCGICLKLCQNYVELSNHLVLEHPNNFDCDGTNLSCRVCGKYHNARSKLQNHATIHVGHEERAQVSSHLCLLCQTSFPLFKLFCEHNKEVHNLSENTEKIEIPPQDTEKKFPFNSCDICSLVFASEQGLINHKRTHTQNDNYKCGQCGELFNSANLLSLHKDEKHRGTEFVCADCKSNFTTYVQLTEHNKICKSKMNKMVLEDDEYEEIEEEEDEEVIEEEEEEESDSGSLSGSEKSLNSDFSDDEEEVESNVTQEEPRAIEAYVVNDNMVEVVKVDISDEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -