Basic Information

Insect: Orius laevigatus
Gene Symbol: -
Assembly: GCA_018703685.1
Location: JAGWEN010001724.1:5166-10401[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 7.5e-05 0.0046 17.4 2.5 2 23 222 243 221 243 0.96

2 23 0.00011 0.0064 16.9 2.1 2 23 250 271 249 271 0.97

3 23 0.0012 0.071 13.6 1.3 1 23 277 300 277 300 0.96

4 23 0.00052 0.031 14.7 5.9 1 23 305 327 305 327 0.97

5 23 3.6e-07 2.2e-05 24.7 2.2 1 23 333 355 333 355 0.96

6 23 0.0012 0.074 13.6 0.2 1 23 360 381 360 381 0.98

7 23 9.5e-06 0.00057 20.2 0.1 2 23 387 408 386 408 0.96

8 23 7.3e-07 4.4e-05 23.7 0.2 1 21 414 434 414 435 0.97

9 23 0.00038 0.023 15.1 7.0 1 23 487 509 487 509 0.99

10 23 0.084 5.1 7.8 0.1 2 19 516 533 515 534 0.93

11 23 0.00077 0.047 14.2 2.8 1 23 545 567 545 567 0.98

12 23 1.3e-05 0.00079 19.8 0.3 1 23 576 599 576 599 0.97

13 23 0.069 4.2 8.0 3.4 1 23 604 626 604 626 0.97

14 23 0.0021 0.13 12.8 0.5 1 23 633 655 633 655 0.97

15 23 0.013 0.79 10.3 2.0 1 13 661 673 661 676 0.92

16 23 0.0039 0.24 12.0 0.8 1 23 692 714 692 714 0.98

17 23 0.044 2.7 8.7 1.3 2 23 721 743 720 743 0.97

18 23 4.1e-05 0.0025 18.2 4.5 1 23 750 772 750 772 0.99

19 23 0.0018 0.11 13.1 0.3 1 19 778 796 778 801 0.91

20 23 8.9e-05 0.0054 17.1 1.2 1 23 806 828 806 828 0.99

21 23 0.00011 0.007 16.8 0.1 1 23 834 856 834 856 0.99

22 23 6.7e-06 0.00041 20.7 4.6 1 23 862 884 862 884 0.98

23 23 5e-06 0.0003 21.1 1.5 2 23 891 912 890 912 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	7.5e-05	0.0046	17.4	2.5	2	23	222	243	221	243	0.96
2	23	0.00011	0.0064	16.9	2.1	2	23	250	271	249	271	0.97
3	23	0.0012	0.071	13.6	1.3	1	23	277	300	277	300	0.96
4	23	0.00052	0.031	14.7	5.9	1	23	305	327	305	327	0.97
5	23	3.6e-07	2.2e-05	24.7	2.2	1	23	333	355	333	355	0.96
6	23	0.0012	0.074	13.6	0.2	1	23	360	381	360	381	0.98
7	23	9.5e-06	0.00057	20.2	0.1	2	23	387	408	386	408	0.96
8	23	7.3e-07	4.4e-05	23.7	0.2	1	21	414	434	414	435	0.97
9	23	0.00038	0.023	15.1	7.0	1	23	487	509	487	509	0.99
10	23	0.084	5.1	7.8	0.1	2	19	516	533	515	534	0.93
11	23	0.00077	0.047	14.2	2.8	1	23	545	567	545	567	0.98
12	23	1.3e-05	0.00079	19.8	0.3	1	23	576	599	576	599	0.97
13	23	0.069	4.2	8.0	3.4	1	23	604	626	604	626	0.97
14	23	0.0021	0.13	12.8	0.5	1	23	633	655	633	655	0.97
15	23	0.013	0.79	10.3	2.0	1	13	661	673	661	676	0.92
16	23	0.0039	0.24	12.0	0.8	1	23	692	714	692	714	0.98
17	23	0.044	2.7	8.7	1.3	2	23	721	743	720	743	0.97
18	23	4.1e-05	0.0025	18.2	4.5	1	23	750	772	750	772	0.99
19	23	0.0018	0.11	13.1	0.3	1	19	778	796	778	801	0.91
20	23	8.9e-05	0.0054	17.1	1.2	1	23	806	828	806	828	0.99
21	23	0.00011	0.007	16.8	0.1	1	23	834	856	834	856	0.99
22	23	6.7e-06	0.00041	20.7	4.6	1	23	862	884	862	884	0.98
23	23	5e-06	0.0003	21.1	1.5	2	23	891	912	890	912	0.95

Sequence Information

Coding Sequence: ATGACGGCTCTTCTGACTAACTGTCAGAATCCAAAAGACGCTGATCTCTGTCGCCTCTGCTTAGAGAAAAGTTCAAATTTGATCTCACTTTTCGACTTCGAACCTTTGGAAAATCCTCTTAAATGCCCACTTATTAATAAAATTTCGCTTTGTCTTTCCGTCCAGATCACCCATGATGATAAAGTGACCACTAAAGTTTGCCACAGTTGCGCTGTGAAAGTGGACGAGTTTTACATTTTTTATAATAAGACGGCAGAATCGCAGAAACTTCTCGCCCAATGGGAGTTCGAAGTTGAAGTTCAAAGAGCGACTGAAAGTTCTGATAAGACTGATTTTACAAGCGTGCTGGATGGTTCGTCGGAAATTCTGGATGGGGCGCTCAGCCTTCAGGAAGAAGAGGAACGGGGAGAGAAGAGAAAAGACGAAGATATTTTGAAAGTCGTGGATAATGAAAGCCTTGCTGCTACTTTTGATGTCGACCCAACCACATCAGACACTGACTTACTCAACATTGACCAGCTTGCCCTTCTAAGCCAGGATAAACCAGAGGATCAATTCAGCGAAAATGTCGAAAAGACGTTTCTGTGCAGCTGTGGAGCGAAGTTTTCATGTCAAAAGTACCTAATGAGACATAAATACAGGCACAATGCTGAAGCGAAAATTCCATGCAGTTTCTGCGAAAGGATGTTCAAAAACAACTCGGAGCTAAAAGACCATCACAAGTCGCACAAACTCGGCCAGAAGATTTCATGCTCGGAATGCGACTTTACTACAATGTACAAATCAAATATGAGGCGACATATGAGAAGACATAAAAAGGAATATTCGTTCGTTTGCGATTTTTGTTTTCGTGGTTTCTTCACTAAAGACGATTTGGAGTCTCATCGGATCAAAAATCATGGAGAAAAGCCATTTTGTTGTCAAACATGCGGCAAAACGTTTACAAGCCGTCTTAACCTTTATTATCACAATCGGACTCATTTTGTGGACAAACCATTTTTATGCGAGACATGCGGTAAAAGTTTTAAAACGAAATACGCCGTAAAAAGACACATGAAGACACATTCGGGACCTAAATATTCATGTCCTGTATGTTCTAAAGCTTTAAACGAAAGCTCGGTGAAGAAACATATGAAAATACATGGAGATAAAAATGTTGTATGTGAGGTCTGCGGTAAGGCTTTTGTGGATAAAAGATATTTGGGGGCACATATGAGGTTTCATAGTGGGGAAAGGCCTTACCAGTGTGGAGAATGCGGTAAACGTTTTACCACGGCCACTTCGTTGAAGGTCCACCAAAGGGATGGAAGTTTGTCGTCTTCGGATTGGCTTGATGGGACGATCGGATGCGATGATATCAAAGAGATTCTTGGCGAGGAAGAAGAGGCGCCGAAGAAATGCGGCCGAAAGTCCAAACCTGATGGAATCGCTCATCTTTTCGATAAGAAAACCCAACGATATAAATGCGACAAATGTCACTATTCGTGTGCTTCAAAGGGGAACTTTAAAAAGCATGTTATGAGGCATAAAAAAGCATATAAGTTGACATGTGAAGAATGTAATCGTGGTTTTTATAATATAGCTGCTTATAAGCAGCATGCACCTGATGGAAATTGTATGCAGAATTTGTCATTTCAATGCCCAAAATGTAGTAGGAAGTATCATTTGCCTTCCAAGTTGAAAGAACATTTGAAGATCCACGATGCGGATTTTTCGTCGCCATTGTTCCAGTGCGACGCGTGCGGTAAAACGTTTGTGACAAAACGCGGTATGGAAAAGCACATTCAAAGCGTACATTTGGGAGTGAGGCACAAATGCGAGCTGTGCGGTAAAGAAGTGACGTGCGTCCAGTCGCTAAGGAACCACATGAAGCTCCACAGCGGAGGCGAGAAATCATTCGTGTGCGCGGTCTGCGGTAAATCTTTCAGCTGCATGACCGGACTAGTCGTCCACGAACGGACCCACACTGGAGCCAAACCGTACAAATGCGACATCTGCAAAAAGTCTTTTACGTCGAAAGTGAAGAAAAAGGGCGACACATTTTCCGACTTTGTTCCAAAAACGAATCGGAAATATTTTTGCAGCGTATGCCCATATGAGAGCGTCTCGACGCAAAATTTCAAAATCCACATGATGAAGCATAATAAGGAATATTTGGTTCAATGCGAGTTCTGCGCCAAAGGATTTTACAACAAACGTTTCTACGAGGAGCACAAAATGACCAAACATAGCGACCAGATAGTCATATTTAAGTGTTCAATTTGCTCTAAAGTTTATCATAGCAGCAGCTATTTGAAGCAGCATTTGAAATCTCATGAGGTTCAAAAGAAATTTCTATGCGAGACATGCGGAAAAGAGTTCAAATCCTGGAAAGGGGTGAAGCGGCACGATTTGATTGAACACCAAAACAGCCGCTATAAGTGCGACATTTGCTCTAAAGAGGTCAATACGCTTCAATCTTTGAATAACCATAGGAAGACACATACCGGTGAGAAATCATACGTTTGTAAGACATGCGGTAAAGGTTTTATCGCGATGAATAATTTGGTTGTTCATGAACGGACTCATAGCGGAGAGAAACGATATAAATGCGATTTGTGCGATAAATCGTTTACACAAAGCAATACTTTGAAGGTACACAAACGACATCATAAAGGGGAAAAGCCCTTTTTGTGTGTTCTCTGTGACAAACGTTTTGTAACCAATTCCCTTCTTAAAACCCATCAAAAAACTCATTATCGAACCAAATGA
Protein Sequence: MTALLTNCQNPKDADLCRLCLEKSSNLISLFDFEPLENPLKCPLINKISLCLSVQITHDDKVTTKVCHSCAVKVDEFYIFYNKTAESQKLLAQWEFEVEVQRATESSDKTDFTSVLDGSSEILDGALSLQEEEERGEKRKDEDILKVVDNESLAATFDVDPTTSDTDLLNIDQLALLSQDKPEDQFSENVEKTFLCSCGAKFSCQKYLMRHKYRHNAEAKIPCSFCERMFKNNSELKDHHKSHKLGQKISCSECDFTTMYKSNMRRHMRRHKKEYSFVCDFCFRGFFTKDDLESHRIKNHGEKPFCCQTCGKTFTSRLNLYYHNRTHFVDKPFLCETCGKSFKTKYAVKRHMKTHSGPKYSCPVCSKALNESSVKKHMKIHGDKNVVCEVCGKAFVDKRYLGAHMRFHSGERPYQCGECGKRFTTATSLKVHQRDGSLSSSDWLDGTIGCDDIKEILGEEEEAPKKCGRKSKPDGIAHLFDKKTQRYKCDKCHYSCASKGNFKKHVMRHKKAYKLTCEECNRGFYNIAAYKQHAPDGNCMQNLSFQCPKCSRKYHLPSKLKEHLKIHDADFSSPLFQCDACGKTFVTKRGMEKHIQSVHLGVRHKCELCGKEVTCVQSLRNHMKLHSGGEKSFVCAVCGKSFSCMTGLVVHERTHTGAKPYKCDICKKSFTSKVKKKGDTFSDFVPKTNRKYFCSVCPYESVSTQNFKIHMMKHNKEYLVQCEFCAKGFYNKRFYEEHKMTKHSDQIVIFKCSICSKVYHSSSYLKQHLKSHEVQKKFLCETCGKEFKSWKGVKRHDLIEHQNSRYKCDICSKEVNTLQSLNNHRKTHTGEKSYVCKTCGKGFIAMNNLVVHERTHSGEKRYKCDLCDKSFTQSNTLKVHKRHHKGEKPFLCVLCDKRFVTNSLLKTHQKTHYRTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -