Olae007929.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Orius laevigatus
Gene Symbol
-
Assembly
GCA_018703685.1
Location
JAGWEN010001092.1:3082-40153[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 59 6 3.7e+02 1.9 0.3 13 23 70 80 68 80 0.89
2 59 0.00014 0.0086 16.5 0.3 1 23 86 108 86 108 0.99
3 59 0.00026 0.016 15.7 0.5 1 23 114 136 114 136 0.99
4 59 0.00031 0.019 15.4 0.2 1 23 142 164 142 164 0.99
5 59 0.0035 0.21 12.1 0.5 1 23 170 192 170 192 0.99
6 59 4.4e-05 0.0026 18.1 0.9 1 23 198 220 198 220 0.99
7 59 0.00067 0.04 14.4 0.1 1 20 226 245 226 248 0.95
8 59 9.8e-06 0.00059 20.2 0.4 1 23 254 276 254 276 0.99
9 59 0.00018 0.011 16.2 1.4 1 23 282 304 282 304 0.99
10 59 8.9e-05 0.0054 17.1 0.3 1 23 310 332 310 332 0.99
11 59 0.17 10 6.8 0.1 5 23 340 358 339 358 0.94
12 59 1.8e-05 0.0011 19.3 3.6 1 23 364 386 364 386 0.99
13 59 0.00014 0.0086 16.5 0.3 1 23 408 430 408 430 0.99
14 59 0.0016 0.1 13.2 0.4 1 23 436 458 436 458 0.99
15 59 0.00018 0.011 16.2 1.4 1 23 464 486 464 486 0.99
16 59 0.00017 0.01 16.3 0.3 1 23 492 514 492 514 0.99
17 59 0.17 10 6.8 0.1 5 23 522 540 521 540 0.94
18 59 0.26 16 6.2 1.2 1 12 546 557 546 560 0.91
19 59 0.00047 0.029 14.9 1.0 1 23 574 596 574 596 0.98
20 59 0.22 13 6.5 0.5 1 13 602 614 602 616 0.92
21 59 0.00057 0.034 14.6 0.1 1 23 630 652 630 652 0.98
22 59 0.00041 0.025 15.0 0.9 1 23 658 680 658 680 0.99
23 59 0.89 54 4.5 1.1 1 11 686 696 686 699 0.91
24 59 6.9 4.2e+02 1.7 3.3 1 23 714 742 714 742 0.77
25 59 0.02 1.2 9.8 1.3 1 23 748 770 748 770 0.99
26 59 7.4e-06 0.00045 20.5 1.5 1 23 776 798 776 798 0.98
27 59 9.6e-06 0.00058 20.2 0.8 1 23 804 826 804 826 0.98
28 59 0.00061 0.037 14.5 0.1 1 23 832 854 832 854 0.98
29 59 0.0017 0.1 13.1 1.9 1 23 860 882 860 882 0.98
30 59 0.00031 0.019 15.4 1.2 1 23 888 910 888 910 0.99
31 59 3e-06 0.00018 21.8 1.7 1 23 916 938 916 938 0.99
32 59 6.3e-05 0.0038 17.6 1.6 1 23 944 966 944 966 0.98
33 59 8.8e-07 5.3e-05 23.5 0.5 1 23 972 994 972 994 0.98
34 59 2.6e-06 0.00016 22.0 0.7 1 23 1000 1022 1000 1022 0.98
35 59 1.5 92 3.8 0.4 1 11 1028 1038 1028 1042 0.90
36 59 3.8e-05 0.0023 18.3 0.8 1 23 1047 1069 1047 1069 0.98
37 59 5.1e-06 0.00031 21.1 2.7 1 23 1075 1097 1075 1097 0.99
38 59 3.3e-05 0.002 18.5 0.8 1 23 1103 1125 1103 1125 0.98
39 59 2.6e-06 0.00016 21.9 0.6 1 23 1131 1153 1131 1153 0.98
40 59 1.2e-05 0.00073 19.9 0.3 1 23 1159 1181 1159 1181 0.97
41 59 0.00036 0.022 15.2 1.5 1 23 1187 1209 1187 1209 0.98
42 59 1.1e-06 6.8e-05 23.1 1.9 1 23 1215 1237 1215 1237 0.99
43 59 1.6e-06 9.8e-05 22.6 0.6 1 23 1243 1265 1243 1265 0.97
44 59 2.2e-05 0.0013 19.1 0.6 1 23 1287 1309 1287 1309 0.98
45 59 0.49 29 5.4 0.6 1 11 1315 1325 1315 1328 0.91
46 59 1.9 1.2e+02 3.5 0.1 13 23 1355 1365 1351 1365 0.86
47 59 2e-07 1.2e-05 25.4 0.6 1 23 1371 1393 1371 1393 0.99
48 59 1.1e-05 0.00065 20.0 2.3 1 23 1399 1421 1399 1421 0.99
49 59 0.0001 0.0063 16.9 0.2 1 23 1436 1458 1436 1458 0.98
50 59 3.3e-07 2e-05 24.8 0.6 1 23 1464 1486 1464 1486 0.98
51 59 0.0065 0.39 11.3 4.3 1 23 1492 1514 1492 1514 0.98
52 59 4.7e-07 2.8e-05 24.3 1.4 1 23 1520 1542 1520 1542 0.98
53 59 0.0003 0.018 15.5 3.8 1 23 1548 1570 1548 1570 0.99
54 59 0.71 43 4.9 0.3 1 12 1576 1587 1576 1590 0.90
55 59 1.9 1.2e+02 3.5 0.6 9 23 1612 1626 1611 1626 0.95
56 59 1.3e-05 0.00081 19.7 0.9 1 23 1632 1654 1632 1654 0.99
57 59 2.3e-06 0.00014 22.1 1.0 1 23 1660 1682 1660 1682 0.99
58 59 4.7e-07 2.8e-05 24.3 1.4 1 23 1704 1726 1704 1726 0.98
59 59 0.0003 0.018 15.5 3.8 1 23 1732 1754 1732 1754 0.99

Sequence Information

Coding Sequence
ATGCCCGATTTGCCCGAAAACTACGAAGCGATCAATATTGTCCCGACAGCGAAATATGACGTCGAAAAACGCAAGCAAGAACTTATAGACAAAATTTCATCATTTATCGACTCATTTGAAAGCAACGAGCAGATCGCAGCTTTCGAAAACATCTTCAACAACATCATCGACCATCAAAATGTAGATTCGACCAATCAAATCGAAGATTTGAGCAGTTTAAACCGTCATAAAAGGATCCATACAGGAGAGAAACCATATAAATGTGATTTCTGCGAAGCTGCATTCACCGCGTCTGGCGATTTGAAAAAGCATACTAGGATCCACACAGGAGAGAAGCCATACAAATGTGACATCTGCGATGCCATGTTTATGTATACAAAAGGTTTGAAAACACACATTTTGACTCATACTGGAGAGAAGCCATATAAATGTGATTTCTGCGAAGCTGCATTCACCGCATCAAATTATTTGAAAATACATATTAGGATCCACACAGGAGAGAAGCCATACAAATGTGACATCTGCGATGCCATGTTTTTGTATACAAGTGGTTTGAAAACACACCTTTCGACTCATACTGGAGAGAAGCCATATAAATGTGATTTCTGCGATGCTACATTCACCGGGTCAGGCAGTTTGAAAACGCATAAAAGGGTCCACACAGGAGAGAAGCCATATAAATGTGACATCTGCGATGCCATGTTTATGTATTCAAGTGCTTTAAAAAGCCACATTTGGATTCATACTGGGGAGAAGCCATATAAATGTGATATCTGCAGAGCTACATTCACCGCGTCAGGCAGTTTGAAAAAGCATATAAGGGTCCACAGAGGAGAGAAGCCATATAAATGTGATATATGCGATGCTAAATTTACCAAGTCAAGCGTTTTGAAAATGCATAATAGGAGACACACAGGAGAGAAGCCATATAAATGTGACATCTGTGATGCCATGTTTATGTATTCATATAGTTTGAAAGGCCACATTTTGACTCATACTGGAGAGAAGCCAAGTGATTTCTGCGAAGCTGCATTCACCATGGCAGGCGATTTAAAAAGGCATAATAAGACCCACACAAAAGAGAAGCCATATAAATGTGACATCTGCCATGCTACATTCACCCTGAGTAGCAGTTTAAAAAGGCATAATAGGACCCACACAGGAGAGAAGCCTTTTAAATGTGACATCTGCGATGCAACGATCCATACAGGAGAGAAACCATATAAATGTGATTTCTGCGAAGCTGCATTCACCGCGTCAGGCGATTTGAAAAAGCATACTAGGATCCACACAGGAGAGAAGCCATACAAATGTGATATCTGCGGTGCCATGTTTCTGTATACAAGTGGTTTGAAAACACACCTTTCGACTCATACTGGAGAGAAGCCATATAAATGTGATATATGCGATGCTAAATTCACCAAGTCAAGCGTTTTGAAAATGCATAATAGGAGACACACAGGAGAGAAGCCATATAAATGTGACATCTGTGATGCCATGTTTATGTATTCAAAAAGTTTGAATGGCCACATTTTGACTCATACTGGAGAGAAGCCAAGTGATTTCTGCGAAGCTGCATTCACCATGGCAGGCGATTTAAAAAGGCATAATAAGACCCACACAAAAGAGAAGCCATATAAATGTGACATCTGCGATGCAACGTTCACGCACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACATAAATGTGATTTTTGCGAAGCTGCATTCACCTGGTCAGGCGATTTAAAAAGGCATATTAGGACCCACACAGGAGAGAAGCCTTTTAAATGTGACATCTGCGATGCAACGTTCGCACGGTCATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATATAAATGTGACATCTGCGATGCCATGTTTGTGTATTCAAATGTATTGAAAAGCCACCTTTTAATTCATACTGGAGAGAAGCCATATAAATGTGATTTCTGCGAAGCTGCATTCACCATGGAAAACGATTTAAAAAGGCATAATAGGACCCACACAGGAGAGAAGCCTTTTAAATGTGACATCTGCGATGCAACGTTCTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCATAAATGTGATTTTTGCGAAGCTGCATTCACCGGGTCAGCCATTTTCACCAAGTCAAGCAGTTTGAAAAAGCATAATGTGACCCACAAAGGAGAGAAGCCATATAAATGTGACATCTGCCATGCCATATTTCCGTATTTAAGCATTTTCATAAGGCATAATAGGACCCACACCGGAGAGAAGCCATATAAATGTGATACTTGCGATGCTACATTCTCCCAATCAAACAGTTTGAAAAGGCATAATAGGATCCACACGGGAGTGAAGACATATAAATGTGATATATGCGATGCCACATTCACCGAATCAAGCAGTTTGAAACAGCATAATATGACCCACTCAGGAGAAAAGCCATATAAATGTGATATCTGCCAAGCTGCGTTCTCTGCGTCAGGCTATTTGAAAATTCACAATAGGATCCACACAGGAGAGAAGCCATATAAATGTGAACTTTGCGAAGCTGCATTCTCCATGTCATGCGATTTGAAAAAGCATAATATGACCCACACTGGAGAGAAGCCATATAAATGTGATATCTGTAAAGCTGCATTCACTTGGTCAACCAATTTGAAAAAGCATAATAGGACCCACACTGGAGAGAAGCCATATAAATGTGATATCTGTAAAGCTGCATTCACTTCGTCAACCAATTTGAAAAAGCATAATAGGACCCACACTGGAGAGAAGCCATTTAAATGTGACTTCTGCGAAGCTGCATTCACTTCGTCAACCAATTTGAAAAAGCATAATATGACCCACACAGGAGAGAAGCCATATAAATGTGACATCTGCGATGCTACATTCGCCAATTCAAGCAATTTGAAAACGCATAATAGGATCCACACAGGAGAGAAGCCATATAAATGTGACATCTGCGATGCCACTTTCACCGAGTCAAGCAGTTTGAAAAGGCATAATAGGATCCACACAGGAGAGAAGCCTTATAAATGTGACATCTGCGAAGCCACTTTCACCGTGACCCACACAGGAGAGAAGCCATATAAATGTGATATCTGCGACGCTACATTTACCATGTTAAACAGTTTGAAAAGGCATAATAGGATCCACACAGGAGAGAAGCCATATAAATGTGATATATGCGATGCTACATTCGCCAAGTCAAGCCATTTGAAAACGCATAATAGGACCCATAGAGGAGAGAAGCGTTATAAATGTAATATCTGTGATGCCACGTTCGACCTCTCAAACAATTTGAGAAAGCATAATAGGATCCACAGAGGAGTGAAGCCATATAAATGTGACATCTGCGATGCTACATTCGCCAAGTCAAGCAATTTGAAAACGCATAATAGGATCCACACAGGAGATAAGCCATATAAATGTGATATCTGCGAAGCTGCATTCTCCACGTCAGGAAATTTGAGAAGGCATAATATGAACCACACAGCAGAGAAGCCATATAAATGTGATATCTGCGAAGCTGCATTCTCCATGTCATGCGATTTGAAAAGGCATAATATGACCCACACAGGTGAGAAGCAATATAAATGTGATATATGCGATGCTACATTCGCCCAGAAAGGCCATTTGACAAGGCATAATAGGACCCACACCAGAAAGAAGCCATATAAATGTGATATCTGCGATGCCACTTTCACCGACTCAAGCAGTTTGAAAAAGCATAATATGATCCACACAGGAGAGGAGCCATATAAATGTGACATCTGCGAGGCTACGATCCACACAGGAGAGAAGCCATATATATGTTATATCTGCGAAGCCACATTCACCGACTCAAGCAGTTTGAAAAAGCATAATAGGATCCATACAGGAGAGAAGCCATATAAATGTGACATCTGCGGTGCAATGTTCACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCTGCATTCACCTGGTCAGGCGATTTAAAAAGGCATACTAGGACCCACACAGGAGAGAAGCCATATAAATGTGACATCTGCGATGCCACTTTCTCTGTGTCAAGCAGTTTGAAAACGCATATTAGGACCCACACAGGTGAGAAGCCATTTAAATGTGATATCTGCCAAGCTGCGTTCACCGAGTCAGGCCATTTGAAAAGGCATAAAAGGACCCACACAGGAGAGAAGACATATAAGATCCACAGAGGAGAGAAGCCATATAAATGTGACATATGCAATGCCATGTTTCCATATCCAAGCAGTTTGAAACTTCATAATATTACCCACACAGGAGAGAAGCAATATAAATGTGATATCTGCGATGCTACATTCACCACGCCAGGCAATTTGAAAAAGCATAAGAAGATACACACAGGAGAGAAGCCATATAAATGTGATACTTGCTCTGCTAGATTCACCGTGAGATGCAGTTTGAAAAAACATAATAGGATCCACACAGGAGAGAAGCCATATAAATGTGATATCTGCGATGCTAAATTCACCAACTCAAGCAATTTGAAAAAGCACAATAGGATCCACACAGGAGAGAAGCCTTATAAATGTGAAATCTGCCATGCTACATTCACCCTAAGATACAGTTTAAAAATGCATAATAGGACCCACACAGGAGAGAAGCCATATAAATGTGACATCTGCGATGCCATGTTTGTAAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCCACTTTCACCGTGTCACGTGATTTGACAAGACATAATAGGAGACACACAGGAGAGAAGCCATTTAAATGTAATATATGCGATGCCACTTTCACCGAGTCAGGCAGTTTGAAATCGCATAATAGGACCCACACAGGAGAGAAACCATATAAATGTGATATCTGCGATGCTACATTCAACCAGTCAAGCACTTTGAAAATCCATAATAGGACCCACACAGGGGAGAAGCCATATAAATGTGACATCTGCGATGCAACGATCCACACAGGAGAGAAGCCATATAAATGTGATATCTGCGATGCTAAATTCACCAACTCAAGCAATTTGAAAAAGCACAATAGGATCCACACAGGAGAGAAGCCTTATAAATGTGAAATCTGCCATGCTACATTCACCCTGAGATACAGTTTAAAAATGCATAATAGGACCCACACAGGAGAGAAGCCATATAAATGTGACATCTGCGATGCCATTGCAATACACTATTGTATCATCAGCAAAAAGGTGGACTTTTCCATTCCTGATGATATTCGAGAAGTCATTGATATAAAGTATGAATAA
Protein Sequence
MPDLPENYEAINIVPTAKYDVEKRKQELIDKISSFIDSFESNEQIAAFENIFNNIIDHQNVDSTNQIEDLSSLNRHKRIHTGEKPYKCDFCEAAFTASGDLKKHTRIHTGEKPYKCDICDAMFMYTKGLKTHILTHTGEKPYKCDFCEAAFTASNYLKIHIRIHTGEKPYKCDICDAMFLYTSGLKTHLSTHTGEKPYKCDFCDATFTGSGSLKTHKRVHTGEKPYKCDICDAMFMYSSALKSHIWIHTGEKPYKCDICRATFTASGSLKKHIRVHRGEKPYKCDICDAKFTKSSVLKMHNRRHTGEKPYKCDICDAMFMYSYSLKGHILTHTGEKPSDFCEAAFTMAGDLKRHNKTHTKEKPYKCDICHATFTLSSSLKRHNRTHTGEKPFKCDICDATIHTGEKPYKCDFCEAAFTASGDLKKHTRIHTGEKPYKCDICGAMFLYTSGLKTHLSTHTGEKPYKCDICDAKFTKSSVLKMHNRRHTGEKPYKCDICDAMFMYSKSLNGHILTHTGEKPSDFCEAAFTMAGDLKRHNKTHTKEKPYKCDICDATFTHXXXXXXXXXXXXXXXSHKCDFCEAAFTWSGDLKRHIRTHTGEKPFKCDICDATFARSXXXXXXXXXXXXXXXYKCDICDAMFVYSNVLKSHLLIHTGEKPYKCDFCEAAFTMENDLKRHNRTHTGEKPFKCDICDATFSXXXXXXXXXXXXXXXXXHKCDFCEAAFTGSAIFTKSSSLKKHNVTHKGEKPYKCDICHAIFPYLSIFIRHNRTHTGEKPYKCDTCDATFSQSNSLKRHNRIHTGVKTYKCDICDATFTESSSLKQHNMTHSGEKPYKCDICQAAFSASGYLKIHNRIHTGEKPYKCELCEAAFSMSCDLKKHNMTHTGEKPYKCDICKAAFTWSTNLKKHNRTHTGEKPYKCDICKAAFTSSTNLKKHNRTHTGEKPFKCDFCEAAFTSSTNLKKHNMTHTGEKPYKCDICDATFANSSNLKTHNRIHTGEKPYKCDICDATFTESSSLKRHNRIHTGEKPYKCDICEATFTVTHTGEKPYKCDICDATFTMLNSLKRHNRIHTGEKPYKCDICDATFAKSSHLKTHNRTHRGEKRYKCNICDATFDLSNNLRKHNRIHRGVKPYKCDICDATFAKSSNLKTHNRIHTGDKPYKCDICEAAFSTSGNLRRHNMNHTAEKPYKCDICEAAFSMSCDLKRHNMTHTGEKQYKCDICDATFAQKGHLTRHNRTHTRKKPYKCDICDATFTDSSSLKKHNMIHTGEEPYKCDICEATIHTGEKPYICYICEATFTDSSSLKKHNRIHTGEKPYKCDICGAMFTXXXXXXXXXXXXXXXXXXXXXXXXAAFTWSGDLKRHTRTHTGEKPYKCDICDATFSVSSSLKTHIRTHTGEKPFKCDICQAAFTESGHLKRHKRTHTGEKTYKIHRGEKPYKCDICNAMFPYPSSLKLHNITHTGEKQYKCDICDATFTTPGNLKKHKKIHTGEKPYKCDTCSARFTVRCSLKKHNRIHTGEKPYKCDICDAKFTNSSNLKKHNRIHTGEKPYKCEICHATFTLRYSLKMHNRTHTGEKPYKCDICDAMFVNXXXXXXXXXXXXXXXXXXXXXXXATFTVSRDLTRHNRRHTGEKPFKCNICDATFTESGSLKSHNRTHTGEKPYKCDICDATFNQSSTLKIHNRTHTGEKPYKCDICDATIHTGEKPYKCDICDAKFTNSSNLKKHNRIHTGEKPYKCEICHATFTLRYSLKMHNRTHTGEKPYKCDICDAIAIHYCIISKKVDFSIPDDIREVIDIKYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01108961;
90% Identity
iTF_01108961;
80% Identity
iTF_01108961;