Olae009529.1
Basic Information
- Insect
- Orius laevigatus
- Gene Symbol
- bab2
- Assembly
- GCA_018703685.1
- Location
- JAGWEN010000037.1:314270-316351[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-09 1.1e-05 25.0 0.0 3 39 302 337 300 342 0.84
Sequence Information
- Coding Sequence
- ATGGCGTCCAATAAGGAGACACAGCAGTTCTGTGTCCGTTGGAACAGCTATCAAAGCAACCTCCAGTCTGCGTTTCCAAAGCTGCTGACGAACGAACATTTTGTCGACGTGACACTCGCTTGTGAATCGAGAATGGTGAAGTGTCACAAAGTTGTGTTGAGCGCGTGTAGCGCATATTTCGAAAAGCTCCTCGTCCAGAACCCGTGTCAGCATCCTATTATATTTATGAAAGACATGAAATACTGGGAGGTCCAAGCGCTTGTGGATTTTATGTACAAAGGAGAAGTGAATGTAACGCAGGATGAGTTGGCGTCACTTTTGAAGGCAGCGGAAGCGTTGGAAGTGCGCGGACTCTGCGGACAACATGAGCAGGGAGGGAACAAACTTTCGCTTCCTAGAGGGACCGAAGCGGCTGCCGAAATGACGAAAAAGAGGCGGCTAGAAAGCGAAGTTAAAGACCTCAACAGCGTCTCGGGGAGTAATGACGAATACTCAAATGGAAACCACCAACAATCACCTATCAACAAACCGACCAACACACTAGAACCACCTAAGACTGACGCACCTTCCACTCCTGGAACGACAAGCACAAGCGTTAAACAAGAAATGAGTGTAAACGACAGTAATTTATTTGAAGATTTGGATGATGATTTCTATCAGGATGACAACTCGCTACAAATTGATGAAACTGGATCGGCTTACTCTTTGGCAGGACCTTCAGTACAACTTGACAGTTCACCAGGCACAGAGAACAGGAATGTTTCAGGACAAGAAGGAAACCACTGGAATTTGAATAATGGCTACCCGAACGTAATATTAACGGAATCATGTTCTTCGAACTATGGTACACCTTCACCGAACAACGAAACACCCGGAAAAATTCAAAGGATACGTCGGTCTGATGCTGAACTTCTAAGTGCGGCCGACTCGATATGTAAAGGTATGACGTTTCAAAAGGCGTCTCAAACTTTCAACATCCCGATGTCAACGATACGGTTTTACATGGCTCGCAAAGGTATGCTCCCGAGTAGAAGAAGAGGACGACGGATCTCCCAGGGTATGGAACAAAATATGCAATCCCACCAAACTACACCACCGCAAATGCAACCTCAACAACCTCCTCCACAGCAAATTCAATCCTCACTCACCTACTCATCACTTCCTAATCTATCGATGCCTCCTTACTTCAAACCCGAACCAAGCGGATTTTAA
- Protein Sequence
- MASNKETQQFCVRWNSYQSNLQSAFPKLLTNEHFVDVTLACESRMVKCHKVVLSACSAYFEKLLVQNPCQHPIIFMKDMKYWEVQALVDFMYKGEVNVTQDELASLLKAAEALEVRGLCGQHEQGGNKLSLPRGTEAAAEMTKKRRLESEVKDLNSVSGSNDEYSNGNHQQSPINKPTNTLEPPKTDAPSTPGTTSTSVKQEMSVNDSNLFEDLDDDFYQDDNSLQIDETGSAYSLAGPSVQLDSSPGTENRNVSGQEGNHWNLNNGYPNVILTESCSSNYGTPSPNNETPGKIQRIRRSDAELLSAADSICKGMTFQKASQTFNIPMSTIRFYMARKGMLPSRRRGRRISQGMEQNMQSHQTTPPQMQPQQPPPQQIQSSLTYSSLPNLSMPPYFKPEPSGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01108555; iTF_00339981; iTF_00339814;
- 90% Identity
- iTF_01108555; iTF_00339981; iTF_00339814;
- 80% Identity
- iTF_01108555;