Olae017347.1
Basic Information
- Insect
- Orius laevigatus
- Gene Symbol
- bab1
- Assembly
- GCA_018703685.1
- Location
- JAGWEN010000901.1:26180-28670[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.1e-13 6.5e-10 38.6 0.0 2 44 356 398 355 399 0.91
Sequence Information
- Coding Sequence
- ATGTCGGCACAGCAGTATTGTTTAAGATGGAACAATCACCGATCCAACCTCTTGACAGTATTTGACCAACTCCTTCAGAATGAAGCTTTTACCGATGTGACATTGGCATGCGAAGGAGGGATGTCTGTCAAGTGTCATAAAATGGTCCTTGCAGCATGTTCCTCCTATTTTCAAAGTTTGTTCACCGAGTTACCTTGCCGTCACCCAGTCGTGGTCTTGAAAGACGTTCGATATGGTGAGATGAAGGCGATTTTGGAATATATGTACAAAGGAGAGGTGAATGTCGCTCAAGATCAGCTGGGAGCGCTCTTAAAAGTGGCGGAAGCGTTGAAAGTGAAGGGTCTCGTCGAAGAAAACGGGAGCCGCCCTCAGATGAAGAGGTCTGATGAAGAAGGAAACGCCATTTCGACATCAACGACGTCACACGCGCCTCCGAGCAGCAGCGTCAACAGCGAAGGATCTCCGCCGCACTCCACCGGCGTCCACCCTGCTGGCTTTTCCAAACTTTCATACTTCTACGGGAGCGGCGGAAAGTCATCAGAACGTAGCAGCAGCAAAATGCCTTTATGGCCCATCGAAGGTGTCTACATGCCCAACGTGCATGGAGGCTCGACCCCTCAAGGAAGCTCACCTTCGACCGCCATGCTCAATCGATGGTACGATTCTCCAAATATGGAACAGCATAACCGAAGGAAAAAAATGTCTAGCCCTCTTCTGAGCCGTGATACACCCATTCTTCGGACTGTCCTCGGACAAGGTCAAGCTGATTCCTCACAGCCTGTTCCTTTAGTATGCAGACCAGACAGCTATGAACCTGGATTCACCAACGGTTCAGGGCCAGATCAAGAAAAGATTGCCAACATCAAACAAGACCCATCAGGAGAAGTACATTCCCCATACACTGATATTTCAAACGTCGATGATGAAAATATAGAAAGGCAATCTGGAATGAACCCACTTATTTTACATTCAATGTTTTCGGAATCAAAAGGAGGAGTATCGAGTGGAATAGCTACTTATGTGCCTGCAGCGAAGCCGGAATGGAAAAGATACAAGCAGTACACAAGGAATGATATTTTATCAGCGATCGAAGCAGTGAAAGGTGGAATGTCTGCGGTAAAAGCGGCGCGGAAGTTTGGAGTTCCTTCCCGCACGCTCTACGACAAAGTTAAAAAATTAGGGATCACGACGAACCGACAATTCAGGAGAAGTTCGAACAGCAACGGAAGTCCGGCGTATCAGTACGGGATGTCTAGGCCCGGACAAATGATGTATCCGGGAGGTGAAGACGAAAGTAAATATCAGCCGGGTCTCATGGAACATGGATATCTACACCATCAACTAGACGTGCAAAATATAAAACGGGAAGATTACGGGAGAGAAGCGATTGCGGCGATGGTTGCGGCTTCGAATACCGAAAACAACAGCGGAAACTCATCAAGTCCAGGGAACGAACACTCTCTTAGCCCAAATTTAATCAAATACGCCCATCGAAGGAGCGTGAGCCCTCAATCGCCGCAGCAAATGGAGGAGGACTCGAATCAAGTCGAAGATCTCTCGGTCTCTCGGAAACCCGAGCCGCCGACAACCTCCCGCGTCATCATGCCCCCGATGAGCCAAGCCAGCACCATCGTCACCACAGCAAGTGACACACAAGATAACACCGACTGA
- Protein Sequence
- MSAQQYCLRWNNHRSNLLTVFDQLLQNEAFTDVTLACEGGMSVKCHKMVLAACSSYFQSLFTELPCRHPVVVLKDVRYGEMKAILEYMYKGEVNVAQDQLGALLKVAEALKVKGLVEENGSRPQMKRSDEEGNAISTSTTSHAPPSSSVNSEGSPPHSTGVHPAGFSKLSYFYGSGGKSSERSSSKMPLWPIEGVYMPNVHGGSTPQGSSPSTAMLNRWYDSPNMEQHNRRKKMSSPLLSRDTPILRTVLGQGQADSSQPVPLVCRPDSYEPGFTNGSGPDQEKIANIKQDPSGEVHSPYTDISNVDDENIERQSGMNPLILHSMFSESKGGVSSGIATYVPAAKPEWKRYKQYTRNDILSAIEAVKGGMSAVKAARKFGVPSRTLYDKVKKLGITTNRQFRRSSNSNGSPAYQYGMSRPGQMMYPGGEDESKYQPGLMEHGYLHHQLDVQNIKREDYGREAIAAMVAASNTENNSGNSSSPGNEHSLSPNLIKYAHRRSVSPQSPQQMEEDSNQVEDLSVSRKPEPPTTSRVIMPPMSQASTIVTTASDTQDNTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01108549;
- 90% Identity
- iTF_01108549;
- 80% Identity
- iTF_01108549;