Basic Information

Gene Symbol
Kdm5
Assembly
GCA_018703685.1
Location
JAGWEN010000114.1:84385-88809[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-23 1.3e-19 70.4 0.0 3 88 100 180 98 181 0.94

Sequence Information

Coding Sequence
ATGGGAGAAAGAATGGAAACGAGGCCCAAAGAACCAAAAATCACGCCAAAGAAAGGCAAAGCCAAATTTGAATTTCAAACTCCAACGGAGGCCCCAGTTATTCGAATGACCGACGAAGATTTTTCGGAGCCTTGGAAGTTTTTGCAACGCATTCGTCCTATTGGGGAGAAGACGGGAATTATCAGATTGATACCGCCGAAAAAGTGGAAACCACCTTTTGCTCTCAAATGGGACGAGCTTTTATTTTCACCCCGGATACAAAGGATAAACGAGTTGGAAGCCAGTACACGAATAAAATTGAATTTTATTGATTTGTTGACGAAATTCTTCGCCGAACGTGGAAAGACGTTTCAGATTCCGACAATAGAGAAGAAACGCCTCGATCTGTACACTCTTCATCGTCTTGTCAAAGACCACGGCGGAATCGACGAAGTAAACAAAGCGAAAAAATGGAACGAATTAGCCAGCATGATGGGCTTTTCGTCGAAAAATGCCGGTTCGTCTTTAAAGCATAACTACGACGACTTAATCACGCCTTTCCTTCTTTCGCAAAAAACTGAAGAAAGACGAGAAAATTTAGGTTGCTCTCGCTCAAACGATAAAAATTCACCCAATTATCTGAAGTCACTTGAAGAAAGACTAAAATCGGGAAAACTACCTCCGACATTACGAGAACTTCGAAGCTTAAGATTTCTTGGGCCTGGGCCGAAAATGCCAGTTTGTGAAGATCTTCAAGAAAACCCTCGGACGCGTGGAAAAAAGATGAATTACGAATTCGACCCTTTGGCTAAATATTTATGCAAAAGTTGCTTAACTGGAGACATAGAAGAGGAAGTTGTCGTCTGCACGACTTGCAGTGATAGATACCATTCTTCGTGTCTTATTCCTCGCCTTGAAGAAGTACCTGATAACTGGCGATGCCCAAAATGCGTCGCCACTGAAGTTTATAAACCTCTGGAAGACTTTGGTTTCGCTCAGACTGAAAAAGTCTACACTTTAAGTAGCTTTAAAGCGATGGCAGATGATTTTAAGAAGAAATACTTCAAAACGGAACCGACTAGCGTGTCAACGAGTCAAGTTGAACAAGAATTTTGGCGAGTTGTGACTTCCATTGAAGAAAGTGTCCAGGTCGAGTATGGAGCTGATCTTCATGTTATTCACCACGGGTCAGGCTTCCCGCGCACATGCCAGCCAAGAATAGATACCATTTCTCCTGAAGAATATGATAAATATGCTAATTGTGTTTGGAACTTAAACAACCTTCCTGTGCAAAGCTCATCTATTCTAAAATTCATCAGTGCTGACATATCGGGGATGAAAATACCATGGATGTACGCTGGCATGTGTTTCTCAACATTTTGTTGGCACAATGAAGATCATTGGAGTTATTCCATCAATTATTTACACATGGGAGAACCTAAAACTTGGTATGGTGTTCCCGGCAATGAAGCTGAAAGATTTGAAAAAGCGATGAAGAACGCAGCACCTGAATTATTCGCTTCTCAGCCTGATTTACTGCACCAACTGGTTACTATCATGAATCCTAACGTGTTGATGAGAGCCGGAGTGCCAGTTTACCGAACGGATCAGCATGCTGGAGAATTCGTGATTACTTTCCCACGAGCTTATCATGCTGGGTTTAATCAGGGATTCAATTTTGCTGAAGCATGTAATTTTGCACCTGCAGACTGGTTGGAAATCGGTCGTGAATGTATAAGCCACTATTCAAGTTTAAAACGTCCGTGTGTCTTTTCTCATGATGAGCTTGTGGTCAATATGGCATTAAATGCTGACGATTTGGAAAGAGAAATTGCAGAGGCGACGTTAAAAGATATGATTGCTATGGTCAACGCGGAAATGATAAAATGGAAACGGGCTGTCTCATTTGGTGTCACCAATGTTGTTGACTTCAACTACGAAACTGTCGAAGATGACGAAAGAGTCTGTGCTGAATGCAACACGACTGTCTTTCTCTCCGGAGTTGTTTGTGCATGCGAAAGCGACAAAAAGAAACTCGTCTGCCTCGAACACGTCCACAAACTTTGTTACGACTGCAAGCCTAGCGAATTCGTCGTCCGATGTCACCACCGTGTAAATCTTCTTAAGGAAACAGTTGAAATCCTAAAAAATAAACTATACAAGTTTGAAAACTGGAAGCAAAGAGTTGAGAGCGCACTTTCTCCTAAAGGAGACAAAATATCATTGAGAGCTTTGACAGGATTGCTTATAGAAGCCAAAGATAAGAACTTCCCACAAAGTGATTTGATCGACCTCCTCGAATTCCAAGTGAGGAAATCAATCGATTGTTCCGCTTTAGCCAGGCTCATAGTCGGCAGTAGTATAAAAAAGAAGAAAGCTGAAAACAAATTGACAGTCGACGACATTGCCATGTTTTACGATGAAGTTCTTTCTCTTCCTTGTAAAATTTCAGAGACGGAAGCATTAAAGAAGTTATTGGACGACGCTCTAAAGTTTCAAAAAATGGCGTCTTCTATTTTGTCCAAACAAGCCGCTCCTAGAAGCCGACTCTCAGCATGCATTGACATCGGCAAATCTTTAGAGTTGGATTTATTAGAACTTCCCCTCCTTGAGAGTCGTTTGATTGAATTCGATTGGGTCAAGAGCACAGAAGAATCGATGGCGAAGGCAGTGTCTCAGGCAGAAGCTGAATCCTTACTTAGATCGTGTCCTGATTCCAAAAGTGTCAAAGTAAGCATGACCAAAGAAGAACTCAAGAGATATATAAACAGTCTCGAAGAAAATAACGATGAAGACGTCGAAGAAGTTGAAGGTTCAAGTGACTCTGAAATTGAAGATTCTCCTCTAGATCACACAGTGCCATTTTCTATGCCAATGGAGCTACTTCCTAATCCGTTAGAAAAGAAAATAGAAAGGGTTTTAATGGGTGAAGAAGTATTATTTATGAACGAGCTAGACGGTTTACTCTCATCAGCTCGGTTACAGAAGTTAAATGATTCATTAATTGAAAGATTAAGGGATGGCATCCTTCAGGTAACCAGCTGGCTTAATTTAGGAAGAAAAGTATTTTTGAAAAACTCATCTACTGTCACTTTGATGCAAGCGTTGTGGCCTCGTCGCTTCGAACCAAGGACTCTTCTTTTTCAAAACAGCCTTCTCAGACATCGACGGAATATTGAAAGCCTCATAAAAGACACCTACACCAAGGAATATTTTGAATACTCCTTCAATGAACAAATTGAAAGCTTGATGAAGCTAAGACTTGAAAGTTTAGAACTGAATTCTCAAATGGACAGTAAAATAAGTACAGTCTCATGTGTCTGTGGTGAGCCATTTGAAAGCACATTCCATTTGTGCGAATTATGCAAGACTGCTTTCCATTACCACTGCATGGCCATGGACCAGAGTTTAAAGATCCCACGATTTACAGGCAACTCAGTCAAGTATATCTGCTCTTACTGTGCGACCACTAAACGACCTACAGTGAACAGTTTAAAAACCCTCTCAGCGGCAGCTGAAAAGATGCCTGTGAAAGTTCCCGAATGTCTCGCCCTTGATTATTATCTTTCAAAAGTCGATGATTGGATCGCTCGAGTCGAAGTTTTAATGGATTCTAAAATTTTCAAGAAAACGTTGAACACATTAGTCGGATGTAACAACATCCATGATCCCGTTTCGTCTGAAAATTGGAATACTTTTAGAAAAAATTTAGTCAAAGTTCCATCCAAGATTTCTCAAGGTAGTTTCCTTCTTCCTCAGGTTAAAGTCGCAGAGAAAAACAATACACAGTGGCTTGCAGAAATAAGATATGAAATCACTCTTGGCGACATGTTTGAAGTTCATTTTAAAGAATTGGAACAGTTGTGGACATTCTTGGATATTTGGGAATCAAGCGATGGGGAAAAAATTGATTTTGATTTTGACGGTCCTTCCACATCAAGGCGAAAAGTGACGCAGAAAAAATCGACTGTTGCTAAAAAGACGACGTCCAGGATTCGAGCGTTTTCGCTTCCAAATTCGATCTCTCCTGGCCCCTCTCCTTCAGTCGATCTCACTACTCCGGCGGTTCTCTCTCAAAGTCTCACTGCGACCTCCCCCATTCAGAAATCGAGACGTAAACAAGTTTTCAAAGGGAAAAGAAAGAGAGCGACGAAGAAGCCGAACACTTCCCAGCCCCAATCGAGCGCCCCGTCGAACTTAGAAGAGCACGAAGACGGCGACAGCTGCGCTGCACCTGACTGCTCGAAACCGTCCGACTGGAATGTCAAATGGGTCCAGTGCGAAGGTGCCTGCGAGCAGTGGTTCCACATGAAATGCCTCAACTTGAAAGACGACCACCTTAAAGACGACGTCGAATTCATCTGCCCTCAATGTATCGAACCTGCCATACCACCCTTTAAAAAAATTAAACTTCCTTTATTGGATGAGAACGAATTCGCCATTTAG
Protein Sequence
MGERMETRPKEPKITPKKGKAKFEFQTPTEAPVIRMTDEDFSEPWKFLQRIRPIGEKTGIIRLIPPKKWKPPFALKWDELLFSPRIQRINELEASTRIKLNFIDLLTKFFAERGKTFQIPTIEKKRLDLYTLHRLVKDHGGIDEVNKAKKWNELASMMGFSSKNAGSSLKHNYDDLITPFLLSQKTEERRENLGCSRSNDKNSPNYLKSLEERLKSGKLPPTLRELRSLRFLGPGPKMPVCEDLQENPRTRGKKMNYEFDPLAKYLCKSCLTGDIEEEVVVCTTCSDRYHSSCLIPRLEEVPDNWRCPKCVATEVYKPLEDFGFAQTEKVYTLSSFKAMADDFKKKYFKTEPTSVSTSQVEQEFWRVVTSIEESVQVEYGADLHVIHHGSGFPRTCQPRIDTISPEEYDKYANCVWNLNNLPVQSSSILKFISADISGMKIPWMYAGMCFSTFCWHNEDHWSYSINYLHMGEPKTWYGVPGNEAERFEKAMKNAAPELFASQPDLLHQLVTIMNPNVLMRAGVPVYRTDQHAGEFVITFPRAYHAGFNQGFNFAEACNFAPADWLEIGRECISHYSSLKRPCVFSHDELVVNMALNADDLEREIAEATLKDMIAMVNAEMIKWKRAVSFGVTNVVDFNYETVEDDERVCAECNTTVFLSGVVCACESDKKKLVCLEHVHKLCYDCKPSEFVVRCHHRVNLLKETVEILKNKLYKFENWKQRVESALSPKGDKISLRALTGLLIEAKDKNFPQSDLIDLLEFQVRKSIDCSALARLIVGSSIKKKKAENKLTVDDIAMFYDEVLSLPCKISETEALKKLLDDALKFQKMASSILSKQAAPRSRLSACIDIGKSLELDLLELPLLESRLIEFDWVKSTEESMAKAVSQAEAESLLRSCPDSKSVKVSMTKEELKRYINSLEENNDEDVEEVEGSSDSEIEDSPLDHTVPFSMPMELLPNPLEKKIERVLMGEEVLFMNELDGLLSSARLQKLNDSLIERLRDGILQVTSWLNLGRKVFLKNSSTVTLMQALWPRRFEPRTLLFQNSLLRHRRNIESLIKDTYTKEYFEYSFNEQIESLMKLRLESLELNSQMDSKISTVSCVCGEPFESTFHLCELCKTAFHYHCMAMDQSLKIPRFTGNSVKYICSYCATTKRPTVNSLKTLSAAAEKMPVKVPECLALDYYLSKVDDWIARVEVLMDSKIFKKTLNTLVGCNNIHDPVSSENWNTFRKNLVKVPSKISQGSFLLPQVKVAEKNNTQWLAEIRYEITLGDMFEVHFKELEQLWTFLDIWESSDGEKIDFDFDGPSTSRRKVTQKKSTVAKKTTSRIRAFSLPNSISPGPSPSVDLTTPAVLSQSLTATSPIQKSRRKQVFKGKRKRATKKPNTSQPQSSAPSNLEEHEDGDSCAAPDCSKPSDWNVKWVQCEGACEQWFHMKCLNLKDDHLKDDVEFICPQCIEPAIPPFKKIKLPLLDENEFAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-