Orus044433.2
Basic Information
- Insect
- Orchestes rusci
- Gene Symbol
- nfxl1
- Assembly
- GCA_958502075.1
- Location
- OY293311.1:17617700-17619720[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.29 4.2e+03 -0.5 0.6 1 5 34 38 34 43 0.89 2 13 5.9e-05 0.84 11.3 17.1 1 18 59 76 59 77 0.94 3 13 8.2e-09 0.00012 23.7 15.3 1 19 86 104 86 104 0.98 4 13 0.0007 9.9 7.9 7.7 10 19 153 162 150 162 0.90 5 13 0.035 5e+02 2.4 4.4 4 12 174 182 172 182 0.89 6 13 4 5.7e+04 -6.1 4.5 14 18 210 214 210 214 0.86 7 13 0.073 1e+03 1.4 0.8 5 11 228 234 225 236 0.88 8 13 2.5e-05 0.35 12.5 6.1 1 11 251 261 245 263 0.91 9 13 4 5.7e+04 -4.7 3.3 6 7 278 279 274 282 0.49 10 13 6.7e-07 0.0095 17.5 17.0 1 19 290 307 290 307 0.97 11 13 4 5.7e+04 -6.0 3.1 10 13 314 317 313 317 0.68 12 13 9.1e-06 0.13 13.9 14.1 1 17 350 368 350 370 0.86 13 13 1.8 2.6e+04 -3.0 0.7 6 10 400 404 399 404 0.87
Sequence Information
- Coding Sequence
- ATGTCGCGGAAATACGCGCGTTCGTTTAGCATACAGGGCAGGGTTGAGTTGTTAGAACATTTCTTACAGTGTCTGGAAATAGTGACGAAATCCTGTCGATGTGGTCAACATAGCAAAGAAGTTCAGTGCTCCAAACAATACCTATGCGATTCTAAATGTAAGAAAATGAAGGACTGCAACAAACATCCCTGCAACCGCAAGTGCTGCGACGGAAACTGCCCTCCATGTGAAAAATCCTGCAATAATACTCTGCAATGTGGCCACCACAAGTGTTCATCGGTCTGTCACAGAGGGCCGTGCTTTCCGTGCCAACAAACCAAAGAAATCTCCTGCAAGTGTAGCTACACTAAAATCACCGTACCTTGTGGGAGGAAGAGCCGCACCAAACCGCCTAAATGCTTGAAATACTGTAAAGCGCCCCCTGATTGTCATCATCTCAAGCGTGACCCTCACCGCTGTCACTTTGGGGATTGTCCTCCTTGCAAACAAACATGTAACAGGTCACGTGACAATTGTCCTCATCCATGCCCTGCCATCTGTCACGACAGTGTACTTGTCAAGATAGAGGCGCAGAAAGCTAGCATGCCTTGGGAACAGACAGGACCGTCTttacaaaaactcaacaaacccTGTCCGGATTGTATTGTAGCTATCAAGGTGACGTGTCTGGGTGGACATGAGACGTGCGACTGGCCCTGCCACGTGGCCAAACCTGCCAGTTGTGGACGACAATGTGGGCGTGTTCTTACATGTACCAATCATACTTGTCAAAGGTTGTGTCATGTAGTTGATGGTACTGATGATGTCAAAGCTGGGACAAATTGTGAAGAATGCTCCAACCCCTGTACTAAGCCACGGCCCAGTGGGTGTGGCCATCGTTGTCCCAATTCCTGCCACCAGGGAGCGTGTCCTCCATGCAAGCAGATGTTGCGGATTAAGTGTCATTGTGGTTTGACACAACCTTACATTCAGTGTTGTGTATGGTTGGATGAGAGTAAGCGAGAAGACATACAAAGTTGTGGCAATCAGTGTCCTAAAAATTATTCCTGCGGCCATCGCTGCAAAACAAACTGCCACTCAGGCCCCTGCCCCAACCCTGACCAGTGtaagaaaaagatgaaaatattCTGTAAATGCAAACGTTTGAAAAAGGAGTTTCAATGTGAAACTATCCGGAAAAACTTGGCAGTGGTGGAGTGTGACGAAATCTGTCTCCAATTGCTCCACGAACaggaaatcaaaaacaaaatagaagagGAATTGAAGTCTAAAGAAGATGATGAGAAAAACAAGCTAGAAATGGAACAGTTTGAGAAGAAGTTTTCAGGAAAAAAGAAGAATAGGAAGAGGGGCAGCTTTGAGAATGAAGAGGAGAATAGGGGGGTGTTGGTGAGGTATTGGGGGTTAGTTCTGGGTTGTTTTGTTGTGTTGACTAGTGTGGTTGTTTATTGTGCGTTGAGTAACTGA
- Protein Sequence
- MSRKYARSFSIQGRVELLEHFLQCLEIVTKSCRCGQHSKEVQCSKQYLCDSKCKKMKDCNKHPCNRKCCDGNCPPCEKSCNNTLQCGHHKCSSVCHRGPCFPCQQTKEISCKCSYTKITVPCGRKSRTKPPKCLKYCKAPPDCHHLKRDPHRCHFGDCPPCKQTCNRSRDNCPHPCPAICHDSVLVKIEAQKASMPWEQTGPSLQKLNKPCPDCIVAIKVTCLGGHETCDWPCHVAKPASCGRQCGRVLTCTNHTCQRLCHVVDGTDDVKAGTNCEECSNPCTKPRPSGCGHRCPNSCHQGACPPCKQMLRIKCHCGLTQPYIQCCVWLDESKREDIQSCGNQCPKNYSCGHRCKTNCHSGPCPNPDQCKKKMKIFCKCKRLKKEFQCETIRKNLAVVECDEICLQLLHEQEIKNKIEEELKSKEDDEKNKLEMEQFEKKFSGKKKNRKRGSFENEEENRGVLVRYWGLVLGCFVVLTSVVVYCALSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -