Orus044436.1
Basic Information
- Insect
- Orchestes rusci
- Gene Symbol
- nfxl1
- Assembly
- GCA_958502075.1
- Location
- OY293311.1:17622240-17634903[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 4 5.7e+04 -7.3 5.6 15 19 129 133 128 133 0.81 2 8 0.17 2.5e+03 0.2 0.4 4 10 164 170 163 170 0.95 3 8 4e-08 0.00056 21.5 17.0 1 19 178 195 178 195 0.99 4 8 2.7 3.9e+04 -3.6 1.4 6 10 221 225 220 225 0.86 5 8 3.9e-08 0.00056 21.5 10.0 3 19 233 249 231 249 0.92 6 8 0.94 1.3e+04 -2.1 1.9 6 10 274 278 273 278 0.90 7 8 1.1e-07 0.0016 20.0 12.4 3 19 286 302 284 302 0.93 8 8 0.0041 58 5.5 8.0 1 16 338 353 338 354 0.94
Sequence Information
- Coding Sequence
- ATGGGGAAATTCAAAGAAGCTCAAAATCGGCTTCAGAACGCCGTTAaaaagcatgtcaaagatgtggAGAGTAGTTCAGAGGAGGAAGAGTTGGACGGCAATGATGTTTTGgacAAAATCCTCTCAAAATACCAAACCCAAGGTGGTCAGTTCGACCAAACCACTCGCACCCAAAAATTCATCCAAGACCTATTCACGTCAAACTCAAACACCTGCCTTATTTGCATCTCGAAAATTCGCAGAGACGAATCTATATGGAATTGCAAAAATTGCTTTGGCACCTTCCATTTGAATTGCATTCAGAGATGGTCGAAGGACACAGTGGTCCAACAAAAACAAAGGATCGTGGAGCGAACACAGAAAAACACCAACATTGAATGGTGCTGTCCAAAGTGTCGTTGTGGTTATCCTCCTGAAGAGTATCCGGATAAATATGTTTGCTTTTGTGGAAAGTGTGTCAACCCCAAGTATCAGAATTTTTTGGTTCCACACTCTTGCGGtgaaatttgcagaaaaaattTGGTGCCAGAGTGCGGGCACAAGTGCCTTCTTCTATGCCATCCCGGTCCTTGTCCTCCATGTCCAGTTACCATCGCCACGGCGTGCTACTGTGGCACGCAATCAGCCCAAATGCGACGTTGCTCTGCCCGTGGTTGGTCTTGCGAGCAACGCTGCTCCAAACCACTTTCATGCAAGAAGCACACTTGCAGCGCCCTCTGTCATGATGGCGCATGCGCTCCGTGCTCTAAAAAAAGCATCCAAAAGTGCCTCTGTGGTAGTGAACATCAGCTACGCGACTGTGCCGATCCCCAATGGCAGTGCGAAAAAGTTTGCAACAGAATGTTGGATTGTAAATCACATAGATGCAGTCAAGTTTGCCATGCAGGAGATTGTGGGTCATGTCCTTTAAATGGACCACGTAGATGTCCATGTGGGAAGAGTGAGTTTGACTTGCCCTGTTCGACGGAGGCGCCAAATACCTGTGGAGGGacgtgtgacaaggttttggaATGTGGACAGCATTTGTGTGGGTTCAGATGTCACAAAGATAAGTGTGGATTGGAGCAAAAAAAAGAGCTCATAGCATTTATAGAGCAGTTCCCGGAATTAAAATCCGGAAAATTTACGGCAAATTTCACTTGTAAAAGAGCCCAAGAACTGTGGATGCAGCTCCGTGAAAAATTAAACGCCCTTCCCGGGGCAAATAAAGACTGGAAGCAGTGGCGAAAGACCTGGCAAGACATGAAgtctaaaacaaaaaaaaagaaaactgaaATCAAAAACCATCGAATGGGCACTGGAGGTGGACCTGAGACACCTGCCATCCTCGACAGCGATGATGAAAAGATCATACAAATCATTGGTCCAGTTCTATTGGATGGAGATCCAGTCATACAAGAATCGGCTAGCCAATTTTCTTTCATCGATAAAGAAGTCGTCATTGAGAATATTGAGAAAGAGTCCAAAAATCAATCTTCAAACTTTGACTGCCATGATGTGGCAGCTCCTACCCCAAAAAGTAGTTCAGCTGAATGCAGTCAAGGTTCCACTGAAACTATTGAAAAACCAGCGCCTACAAAACTGCAAAGGTTACAGAAAACCGTAGAAGCCAATGATAAGCTGTTACAATTAACTGAACAGCAAAATGTGATGTATAAAAGGAATGTGGAGGCCAATGAGTCTAAGGCAGAAAGCTTGAAGTCAATTGCCGAAAGTTTTAAACTTTTAGTGGACCATTTTATTTATAAGGAGGCATAA
- Protein Sequence
- MGKFKEAQNRLQNAVKKHVKDVESSSEEEELDGNDVLDKILSKYQTQGGQFDQTTRTQKFIQDLFTSNSNTCLICISKIRRDESIWNCKNCFGTFHLNCIQRWSKDTVVQQKQRIVERTQKNTNIEWCCPKCRCGYPPEEYPDKYVCFCGKCVNPKYQNFLVPHSCGEICRKNLVPECGHKCLLLCHPGPCPPCPVTIATACYCGTQSAQMRRCSARGWSCEQRCSKPLSCKKHTCSALCHDGACAPCSKKSIQKCLCGSEHQLRDCADPQWQCEKVCNRMLDCKSHRCSQVCHAGDCGSCPLNGPRRCPCGKSEFDLPCSTEAPNTCGGTCDKVLECGQHLCGFRCHKDKCGLEQKKELIAFIEQFPELKSGKFTANFTCKRAQELWMQLREKLNALPGANKDWKQWRKTWQDMKSKTKKKKTEIKNHRMGTGGGPETPAILDSDDEKIIQIIGPVLLDGDPVIQESASQFSFIDKEVVIENIEKESKNQSSNFDCHDVAAPTPKSSSAECSQGSTETIEKPAPTKLQRLQKTVEANDKLLQLTEQQNVMYKRNVEANESKAESLKSIAESFKLLVDHFIYKEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -