Basic Information

Insect: Orchestes rusci
Gene Symbol: L
Assembly: GCA_958502075.1
Location: OY293303.1:11705978-11708466[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.016 2.6 10.3 5.7 1 23 94 116 94 116 0.97

2 11 1.1e-05 0.0018 20.2 1.9 1 23 122 144 122 144 0.99

3 11 0.098 16 7.8 2.1 1 23 150 172 150 172 0.95

4 11 5.6 9e+02 2.3 1.7 1 23 290 312 290 312 0.92

5 11 1.1 1.8e+02 4.4 8.4 3 23 347 367 345 368 0.91

6 11 0.0072 1.2 11.4 0.9 1 23 373 396 373 396 0.94

7 11 5.8e-05 0.0093 18.0 4.4 1 23 454 476 454 476 0.99

8 11 2.5e-05 0.004 19.1 0.8 1 23 484 506 484 506 0.98

9 11 2.5e-05 0.004 19.1 1.0 2 23 615 636 614 636 0.95

10 11 0.0091 1.5 11.0 0.0 1 23 644 666 644 666 0.97

11 11 0.39 63 5.9 1.1 1 23 673 695 673 695 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.016	2.6	10.3	5.7	1	23	94	116	94	116	0.97
2	11	1.1e-05	0.0018	20.2	1.9	1	23	122	144	122	144	0.99
3	11	0.098	16	7.8	2.1	1	23	150	172	150	172	0.95
4	11	5.6	9e+02	2.3	1.7	1	23	290	312	290	312	0.92
5	11	1.1	1.8e+02	4.4	8.4	3	23	347	367	345	368	0.91
6	11	0.0072	1.2	11.4	0.9	1	23	373	396	373	396	0.94
7	11	5.8e-05	0.0093	18.0	4.4	1	23	454	476	454	476	0.99
8	11	2.5e-05	0.004	19.1	0.8	1	23	484	506	484	506	0.98
9	11	2.5e-05	0.004	19.1	1.0	2	23	615	636	614	636	0.95
10	11	0.0091	1.5	11.0	0.0	1	23	644	666	644	666	0.97
11	11	0.39	63	5.9	1.1	1	23	673	695	673	695	0.95

Sequence Information

Coding Sequence: atgaaaatgttattcAAAGGTCATAGTACTCGCTTGGAATTACTCATTGAAAAAATCCACTCCAATAAAGAGGTTGTGTCATGTCAAGATTCTGAAATATCTGGCAGTACTTCTTCAGAATGTCGGGTAAATGTCACTGATAATGTGCCGGAAAGCAACCCGGAATCGCCAAAGTATCACAGTTTTTCCGATACTGAAGAGGAAAGGGAATGGgaagaatctaaaaaaaatggtgATTCGTTGGCTGATGACAAGGATTCAGATTTAAAATTTCGTCAATTTTTCTGTCAGTACTGTCCTAGACAATTCAAGCATAAGCGGTCCAGAGATCGTCACATAAAGTTGCATACCGGTGATAAAAAGTACAAATGCTTGCAATGTGAATCTGCTTTTGCTCGAAGTGACCATTTGAAAATCCACATGAAAACTCATGATGTCAAAAAACAGTACAAATGTTTGAAATGTAATAAAGGGTATAACACTGTCAGCGCATTCACGTTCCACGAAAAGAGTCATCGAGATAAGTTTTTGAAGGGCAAGTTTCTGTCCAGCTCGGAAGAGTATGATGATACTGATTTTCTCCAGtcTTCTGTATGTAAATGGAATGAAAATGAGGATAATCTGGAAACAAGAACAGTATGTATCTACTGTTTCCAGTGGTTCTCAAGTATGGAATTTATGAAAGAACATATTCAAATCTGTCACAGGAATCTGGATGATACGAAGAATATCACCGATAAAAAGTCTCATGGTACCTACTTTGACTACGATATGGACATAACACAATTCAAACGACCAAAAGAAGACAATGAGGACAACCAGCACAAAAAAGTGCATTACGACGATAGTCTTGAAACCTCAGAAACATTCATATGTTCATGTTGCTACCAACGGTTACCAAACTTTGAGAGTTTTCTGGTTCATATGGAAACCCACGTTACTTCTGTTAAAAGTAAAAGCTGTGATGAGGAAGCACGTGATTCATTGGCTAAAAATTTGACCAATTCCTGCATTAAACCTGTAAATAATGTCAAGTGTTGTTGCCAATGTAACAGATTTTTTGATAGTACTGACAAACTCCAGGAACACCTCGTCAAACATCATATTAAGACTTTATATAAATGTTCTCTGTGTGCCAAGGAGTTCGAGGACATCTCCTCGATGAAGACTCATCTGTTTAACAACCATATAACTAATACAGATCATTTCGAGTGCAATTGTTCTGGAGATTCAAAACTATTTCATGACAGAGTATCAGCAGAACATCACTTTTCCACATACCATAACACTGTTAAGTGGAAGGATCTGAAAACTAACGGACTACAGGACgacgttttaaaaaattctgCCAGTTCAGTATATCGCTGCCCGTACTGCAAAGAATTCTGCAAATCCCGTAACGACCTACAACTTCATATGAAATCCCATCAAGTATCTGACAAATCCAGACACAAGTGTAATATTTGCGATGAAACCTTCGATTCGTCTCCTGAACTGGCCACTCATAAATTGACTCACTGTAAAATTATCGAGGGCAACATCTGCGCCCCTTGCAAAATGATTTTAATGGACGAGGAATCGTTTGTAAAGCACCAGCTCAAACATAACGATAATTCCAAGTCTACAGCCAAGCTGAACTTAATCCTGCCCTCGATTTGCATTGTCTGCGGTCAAACGCTGCAAAGCGATGGAGAAATTGACCTGCATGCTAAATTCCACCTGAGGTTTCTTTCTGAACAGTCTGGAAGTAGAGTAACAGGATCACCGTATTCCGAAGAAGCTTATTCGATCAGTGAGagaaacaaaattaaaactGCTGTAGTTGATGCTTCGTTTGAACTTCAATGTCATTTATGCAAGAAGTCATTTCCGGATAAGGGAAAGCTGCAAATTCATTTGATCGAGCAtaatttttctggaatcaatCACTATAGCTGTTATATATGTTCATCGGTTTTTACTGGAGCGGCTGGGCTTCAAAGTCACCTTTTGGCTCATAATTTAACGGAAAAGCCTTATCAGTGCTCGAGATGTTCCgctggattttttttcagggcCGAACTAGATAATCATAAGTATTTGCATAATTTCAAGCTCCACTTTGATTGTTTAAGTGATGAATCGATCGCCCAGGCCCGGAATTTTACTAATGCATGGGTTCCCAGTGAAATGTCCACTGTTGTTTCCCGTTAA
Protein Sequence: MKMLFKGHSTRLELLIEKIHSNKEVVSCQDSEISGSTSSECRVNVTDNVPESNPESPKYHSFSDTEEEREWEESKKNGDSLADDKDSDLKFRQFFCQYCPRQFKHKRSRDRHIKLHTGDKKYKCLQCESAFARSDHLKIHMKTHDVKKQYKCLKCNKGYNTVSAFTFHEKSHRDKFLKGKFLSSSEEYDDTDFLQSSVCKWNENEDNLETRTVCIYCFQWFSSMEFMKEHIQICHRNLDDTKNITDKKSHGTYFDYDMDITQFKRPKEDNEDNQHKKVHYDDSLETSETFICSCCYQRLPNFESFLVHMETHVTSVKSKSCDEEARDSLAKNLTNSCIKPVNNVKCCCQCNRFFDSTDKLQEHLVKHHIKTLYKCSLCAKEFEDISSMKTHLFNNHITNTDHFECNCSGDSKLFHDRVSAEHHFSTYHNTVKWKDLKTNGLQDDVLKNSASSVYRCPYCKEFCKSRNDLQLHMKSHQVSDKSRHKCNICDETFDSSPELATHKLTHCKIIEGNICAPCKMILMDEESFVKHQLKHNDNSKSTAKLNLILPSICIVCGQTLQSDGEIDLHAKFHLRFLSEQSGSRVTGSPYSEEAYSISERNKIKTAVVDASFELQCHLCKKSFPDKGKLQIHLIEHNFSGINHYSCYICSSVFTGAAGLQSHLLAHNLTEKPYQCSRCSAGFFFRAELDNHKYLHNFKLHFDCLSDESIAQARNFTNAWVPSEMSTVVSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -