Orus034917.1
Basic Information
- Insect
- Orchestes rusci
- Gene Symbol
- Znf131
- Assembly
- GCA_958502075.1
- Location
- OY293308.1:16388211-16390696[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00029 0.047 15.7 2.2 1 23 141 163 141 163 0.98 2 10 0.00034 0.055 15.5 0.8 1 23 169 192 169 192 0.95 3 10 1.3e-05 0.002 20.0 2.1 1 23 200 222 200 222 0.98 4 10 7.8e-07 0.00013 23.8 0.9 1 23 224 246 224 246 0.98 5 10 7.2e-05 0.012 17.6 5.6 1 23 252 275 252 275 0.97 6 10 4.4e-06 0.00071 21.5 0.1 1 23 281 303 281 303 0.98 7 10 0.00054 0.088 14.9 1.0 1 23 309 331 309 331 0.97 8 10 3.1e-05 0.005 18.8 5.0 1 23 337 359 337 359 0.97 9 10 6.6e-06 0.0011 20.9 3.9 1 23 365 389 365 389 0.98 10 10 2.4e-05 0.0038 19.2 2.7 1 23 395 417 395 417 0.98
Sequence Information
- Coding Sequence
- ATGtgtattattttattatctGACGATGATTTTTATGGAAGTGATTTCCATGTTTCTGAAGAAACCCTAGTGGTTATTGGACATGTGAACATTTTAACACTTCATACTACTGTACTGATAATAAACCAGGCGTTGCCCAACAATATTTGCTCTTCCTGCTTTTCCCTTCTACAAAGTACATTCACTTTCCTGAATGATATCACTTTCTCTAACAATACCCTCAATGAATATATAAATCAGAAAGATGAGTCTAGACCATCGATACGTACTGGACCCGTTGAAATCGTTTATGAAAAGGAGGAGCTTGATATTGTCGAgaataattttgaagatattgtgGAGGTGGACTTAACGACCGATATGGAGGAATTGCAGGCAGAAGTGAACAAGCCGCGTGAAAGGATCAGTTCCAATGGGAAGTTTAAGTGTAGCTTCTGTGATAAGCAGTATAAGTATTCATATGATATAAAGATACACGAACGCGTACATACAGGCGAAAAACCCTTTTCATGTGATGACTGCGACGAAAAATTCATCAGTGCTCGTCATGTGCGCATCCACAAAATCAAAGTGCACAATTTCAAAACAGGCCGAATTCATAAATGCGTTATCTGTGTTAAAATCTTTTCCAGAAGAGATGATCTAAGAGCCCATTTCAAAACCCACACTTTCAAGTGTTCGGTTTGCGAAACAAGTTTTAGCACACTGTCTAGTTTGAACAGGCACGCACTAACGCACACTTCTGAAAAAAGGTTCGAGTGTAAAGTGTGTCAAAAGCAGTTTTCGCATAATTTTAGCTTAAAAACTCATGAGCGCCGGTTTCATACAGATGAGAGAAAGTTCGTTTGCGAGAGATGCGGAAAAGGGTTTTATACGAGTGGAGAACTGACTGTGCATGGGCGAGTACATACAAAGGAGAAACCTTATAAATGTACATTGTGTTTGAAAGCGTTCTCCAATAAAGCAGCACTCAACTTCCACACAAAAATCCACACTGGCGAAAGGGGTCACTCGTGTAAATTTTGCCATAAGAAATTTCGATCAGGCGCTGATCTAAAAGTTCATATGAGGGTACATACGGACGAGAGGCCGTATATATGCCCATATGCTGACTGCgacaaaaactacaaaacgAACAGTCATTTACATTATCATTTGAGGACTCATACGGGCGAAAGGTCGCATAAGTGTGGCACTTGTGATAAAGCTTTCGGAGAAAGAAATACTTTGAGAAGACACTTGAAAACCCATCGATAG
- Protein Sequence
- MCIILLSDDDFYGSDFHVSEETLVVIGHVNILTLHTTVLIINQALPNNICSSCFSLLQSTFTFLNDITFSNNTLNEYINQKDESRPSIRTGPVEIVYEKEELDIVENNFEDIVEVDLTTDMEELQAEVNKPRERISSNGKFKCSFCDKQYKYSYDIKIHERVHTGEKPFSCDDCDEKFISARHVRIHKIKVHNFKTGRIHKCVICVKIFSRRDDLRAHFKTHTFKCSVCETSFSTLSSLNRHALTHTSEKRFECKVCQKQFSHNFSLKTHERRFHTDERKFVCERCGKGFYTSGELTVHGRVHTKEKPYKCTLCLKAFSNKAALNFHTKIHTGERGHSCKFCHKKFRSGADLKVHMRVHTDERPYICPYADCDKNYKTNSHLHYHLRTHTGERSHKCGTCDKAFGERNTLRRHLKTHR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -