Orus045362.1
Basic Information
- Insect
- Orchestes rusci
- Gene Symbol
- ZNF296
- Assembly
- GCA_958502075.1
- Location
- OY293311.1:29522797-29533345[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 0.45 72 5.7 2.5 2 23 64 82 63 82 0.92 2 35 0.96 1.5e+02 4.7 4.5 1 23 85 108 85 109 0.94 3 35 0.058 9.4 8.5 0.7 1 21 115 135 115 137 0.89 4 35 1.4 2.3e+02 4.1 2.2 1 23 141 165 141 165 0.87 5 35 0.00089 0.14 14.2 0.3 1 23 171 193 171 193 0.97 6 35 0.0017 0.27 13.3 2.2 1 23 199 222 199 222 0.93 7 35 2.9e-05 0.0047 18.9 0.4 1 23 233 256 233 256 0.94 8 35 3.9e-05 0.0064 18.5 3.3 3 23 266 286 265 286 0.98 9 35 4.3e-05 0.0069 18.4 2.6 1 23 292 314 292 314 0.97 10 35 0.03 4.8 9.4 0.1 3 23 475 495 473 495 0.94 11 35 0.0089 1.4 11.1 0.5 1 23 500 522 500 522 0.97 12 35 0.17 28 7.0 2.0 1 19 526 544 526 546 0.90 13 35 0.0001 0.016 17.2 1.1 1 23 554 576 554 576 0.96 14 35 4.1e-05 0.0066 18.4 2.5 1 23 582 605 582 605 0.97 15 35 0.00057 0.092 14.8 4.1 1 23 616 639 616 639 0.95 16 35 0.00014 0.023 16.7 0.3 2 23 648 669 647 669 0.97 17 35 0.69 1.1e+02 5.1 0.4 1 16 675 690 675 692 0.90 18 35 0.0069 1.1 11.4 1.6 1 23 774 796 774 796 0.97 19 35 0.066 11 8.3 1.2 2 23 803 824 802 824 0.97 20 35 1.3 2.2e+02 4.2 0.2 1 23 828 852 828 852 0.80 21 35 5.5 8.9e+02 2.3 2.8 2 23 859 880 858 880 0.87 22 35 0.00061 0.098 14.7 3.8 1 23 886 909 886 909 0.92 23 35 0.0006 0.097 14.8 1.8 1 20 920 939 920 940 0.96 24 35 1e-06 0.00016 23.5 1.1 2 23 952 973 951 973 0.98 25 35 1.8e-06 0.00029 22.7 1.5 1 23 979 1001 979 1001 0.98 26 35 0.066 11 8.3 2.7 2 23 1096 1117 1095 1117 0.96 27 35 0.34 54 6.1 0.3 1 23 1142 1164 1142 1164 0.98 28 35 0.049 8 8.7 0.5 1 23 1196 1219 1196 1219 0.97 29 35 0.0025 0.41 12.8 3.1 1 19 1225 1243 1225 1247 0.90 30 35 0.21 33 6.8 4.6 3 23 1255 1276 1253 1276 0.96 31 35 0.00045 0.072 15.2 0.3 2 23 1288 1310 1287 1310 0.91 32 35 1.8e-05 0.0029 19.6 1.2 3 23 1324 1344 1322 1344 0.96 33 35 0.00011 0.017 17.1 0.8 1 23 1350 1372 1350 1372 0.98 34 35 7.7e-05 0.012 17.6 1.2 1 23 1378 1400 1378 1400 0.98 35 35 0.0072 1.2 11.4 0.0 1 21 1406 1426 1406 1427 0.95
Sequence Information
- Coding Sequence
- ATGGAGGAACCCTGCAACATGGAGCTATCATGcttAAACGAAACGCAGCTTCACTTGAAGCTGCTCGAGGGCAAAGAAGAGATTGTTATTGAGTTTACTGATGATACTCAAGTGGAGTTGCAGACCAAGGTTGATGAGATTGAAATTAAAGAGGAGCCGCTTGATGTTGACCCTAAAGAGGGTAAGAAAGAGTGCAGTGAGTGCGGGATGTTCTTCAAACATCTGGCCAGACACTTGGAGACTCATGGGCCCTACAACTGTCTGGATTGCTTGTTGCACTTCAAAACCAAAAAGGCCTACCATGACCATATTGAGGAGGTCCACCACCAAGACTCCACCACCCATAGATGCACCATTTGCGACTTGGGTTTTATCAACTTGACCAAACTGGCCTTGCACAATTTTGAGCACACTCAAAAGTACAGCTGCCCTTTGTGCCAGTTTACTGTCAAGGGAAAGTACAAGCATTCGTTGATCAACCACATCAAGcgtcatgaaaaaaagttttccttTCACTGTGATATTTGTGGGCAAGGTTTTGTTGGGAAAAACTTCCTTGCTAGTCATATGGAGATCCATGAGGATATTCCCAAGTATGAGTGTGAGTTTTGCAAAAAGAAGTTCACGGTTAAGAGGTATCTGGAGGTGCACAAAAGCTTGAATCATAAGAAGGAGTTGTATGGGATTGAGGAGATGTTCCAGTGCGAGATATGCGGGAGGAAGTTCACGTTTGAAAAGAGTCTGGTGAGGCATTTGAGTGCCATTCATAAGGTTGGGGAGGATCGTACCAAGGATTGTCCGGTCTGCCACAAACGTATAGCCAACAACCACAACCTGAAGAAGCACATGCGCGTACACACCGGCGAGAAACGCTTCTGCTGCGACCAATGCGGCAAAGCCTTTGCCGAAAAGAAGTACCTGCAAAAACACCAAGCACGCCACCAACGCGAAGAGTCAAACGTCAAAGAACTCAAACAAGGAATGCCAACCATGCCAAAACCTCACTTGCCGCCTGCGTTTGTTGCAGTAGCAGGAAAACCAGAATTTCCTGCTTGCATACCATTAACCTATCCCAAATTTGGCTACTATCCTGGCTTTGAAGATAGTGACTATGACGATGACGATGATGACGTGGGCATGGACCCTCTTGGTTTTTACTTTAACGGAATGCCTCCCAGGTCTCAACCACAACTATTCCTAGTTAAAACCGATACGGGGCTTCAGGTAATTCTCGACACTGTCGCACCAAAGACCCTCAGAAAGCCCATAGAGTGCATGGTTTGTGGCAAACATTACATGCACATTGGTAGGCATATGAGGACCAAGCACTCCATTCCTATGCCAAAAGCCCCCAAGTTATGCCCCATTTGTGGCAAGCTGGCCCACCCCCAAACCCATCATCATCATAACAAGGAACTGGCGTGCAGCATTTGCTTTGCTGGGTTTAAAACGGAAAGAGAACTGAGGCAACATGAAGATATTCATAGTGGCGAGCATTATAAGTGCGACCAGTGTCCtttgattttcaaaactttgGCAGAGATGGCGCTGCACCACTATGTCCATACAAACGTGTACATGTGTCCGAAGTGCAAATCGACGTTCAAGTCCAGACAGAGCTTGCGCTGCCACGTGGCTAATGAGGAGCAGGTGTTCAAATATATTTGCGAAATTTGCCATAAGGGGTTTACGTTGAAGAACGATCTGCGCAACCACTTGGAGTTGCACGAGAATGGAAAAAAGTACCAGTGCACTTTGTGCGATAAGAAGTTCAACTTGAAAGTCTACTTGAAGAACCATCAAAGGCTCAACCACAAAATGGAGCTGTTTGGAGTGGAAGAAGTATTTCAGTGTGAGTACTGTTCCCGGACGTTCACCTTTGAGTGCTCGCTTAAAAGACATCTAAGCCTGGTGCACAAGGTGGGAGGGGAGAAACGAGTACAGTGCGAAATCTGCTCCAAAATCCTCACCACAACCTACAGCTTGACAGTCCATATGAGGCTGCACACCGGAGAAAAGAACTACACTTGTGGCGTCTGTGGTGACAAGTTTTCCAGATCCCAGAATTGGTCCAAGCCGTCCGACATAATAGGCAGACGTGTTAccatcaataaaacaaaacgCAGGGGCACAGCCTTGGGCAAGCTAATATTGCAACTGGACGAAGACAGTTCCTGTGACTGGACCGAGGATGACGAATGGCTGGTGGAAGTAGAATCAGACAAGCCCAAGAAAAAGCAGGACAAGTCGGGACTTTGTCCGCAATGTGGCCGCGTGGTGTTGGACCTGCGCAGTCACGTCAAAAGCCACGCCAATGTGCACTCCTGCGACAAGTGCTTCATCAACTTCAAAAACGAGAAGCTCCTCAATGAGCACCTGGAGGTGCACGAAACAGATAACCCACAAAAGTGCGACTTGTGTAACTTAATATTTAAGGACGTAACCAAACTAGCCTTGCACAGACATGTCCATACGGGCAGCTACGACTGTCCCATCTGCGGTTTTATGGCTACAAGCAAGTTTAGAAACTCCATCATAGCCCATATAAAACGGCACGAAAACAACTACTCTGTGCGGTGCCACATTTGCAACAGGGGGTTCTTGTGCAAGAAAAAACTGGAAGAGCACATCGAGTGGCATGAGAACATTCCCAAGTACAAATGCGAGATTTGCCATAAGAAATTTGCCGTTAAATCCTATCTAACCCTGCACAATAAGTTCAACCATAAAAAGGAACTGTACGGTACTGAGGAGACGTTCCAATGCGAGCTTTGTGGCAGGAAATTTACCTTTGAAAAGAGCTTCAAAAGACATCTGAGTTGTATCCATAAAGTTGGCAAAGATCATACTGTTAAGTGTCCAGTGTGTGATAAAACCATCGCCAACAACCACAATTTGAAGAAGCACATGAGGGTGCATACTGGGGAGAAGAACTACAGCTGTGATGTTTGTGGCAAGACGTTTTCGCAAAGGCAGTATGTTACGCGACATCAGAAGGTGCATCAGGCTGAGAGGGAGGCTAGGAGGAAAGGGGCAGGAAGGGGAGAGCCCAAAGAATCTCAGTGTAAGCATTTCGGGGAGGCCCATGCCCACATAACCATCAAACAAGAATACCTCTATCTCGAGGACCAAGACTCCAAAGGCCGCAAAGTAAAACGAAAACTCTTAATCAAAAGAAACCACTGGTCCGACGATGACAAACCCAAACCACGGCGCatgcgcatcaaaaaggaagaaCCCAAATCCCCGCCCAAACTGCCCAAGAACCAAAAAGCCAACATGTGGACGTGCAAGTTTTGCTTCCAGACTTTCGACACCAGAAAGGAGATGTTTGAGCATCGCAAAGAGCACGCTGACGAGGataaacctaaaatgcaacctgACGACGTTGCCAAGTACACTTATGATGAGGAGGCTGAGATTTATATCTGCAGCAATTGTTCAGCAGAATGTCAGGATCTGGATGAAATCGAGAAGCACGTTATGACGCATGAGAAGAAATTTAGTTGTTATGTCTGCCACGAGGATCAGTTTGGCCCTATGAACTACGCGGTGCACGTGCAGAAGCACCGTGAGGACAAAATGTTCCCTTGTCCATGGTGTCAGTATATGTCGCACAAAAAGGAAGCTATGCAGGTGCACATTAACAGGCTGCACCTGCAAATTTACGACTTCCAGTGCACCAAGTGCGGCAAGTGCTTCAACGACGCACTTAGCTTCAAGGAGCACGACAACGTCCATTTGAACATCAAACCTTTTGGCTGTGTCGTTTGCAGCAAGCATTTTTACTACTCGCGTTACTTGCACTCGCACCAGCTGCGCACCCATACAGTGCGAGTATTAGATCCAGAGTCCAAAACCCAGTGCAACATTTGCCAGAAGATCTTTGCCAGGGTGGACACGTTGGAGAAGCACTACGCCGCCAAGCATCTGACAGTGCGTACTGGGCCTTACGAGAAAAAACATTTGTGTGACGTATGTGGGCAAGGCTTCTCACGCCCTGATAAGCTGAAGATCCACTATAGAAAGCACACAGGGGAAAAGCCGTATTCTTGTGTCTACTGCAGCAAGAGCTTCATCAAACGGGACTATTTGATAATGCACGAGCGCATCCACAGTGGCGAGAAGCCCTACAGCTGCGAGTTTTGCGGCAAGTGTTTCAACCAGGGGGCGCCACTGCGGATCCACCTGAGGAGCCACACGGGAGAGAGACCGTATATTTGTCCCTATTGTGGGGCGGGGTCTGTGTCACGTGGCGCCCTCAATAGTCATATTAAAAGTTGTATCAGTACGTCGCAAGTGTTGACTAATAATGACTaa
- Protein Sequence
- MEEPCNMELSCLNETQLHLKLLEGKEEIVIEFTDDTQVELQTKVDEIEIKEEPLDVDPKEGKKECSECGMFFKHLARHLETHGPYNCLDCLLHFKTKKAYHDHIEEVHHQDSTTHRCTICDLGFINLTKLALHNFEHTQKYSCPLCQFTVKGKYKHSLINHIKRHEKKFSFHCDICGQGFVGKNFLASHMEIHEDIPKYECEFCKKKFTVKRYLEVHKSLNHKKELYGIEEMFQCEICGRKFTFEKSLVRHLSAIHKVGEDRTKDCPVCHKRIANNHNLKKHMRVHTGEKRFCCDQCGKAFAEKKYLQKHQARHQREESNVKELKQGMPTMPKPHLPPAFVAVAGKPEFPACIPLTYPKFGYYPGFEDSDYDDDDDDVGMDPLGFYFNGMPPRSQPQLFLVKTDTGLQVILDTVAPKTLRKPIECMVCGKHYMHIGRHMRTKHSIPMPKAPKLCPICGKLAHPQTHHHHNKELACSICFAGFKTERELRQHEDIHSGEHYKCDQCPLIFKTLAEMALHHYVHTNVYMCPKCKSTFKSRQSLRCHVANEEQVFKYICEICHKGFTLKNDLRNHLELHENGKKYQCTLCDKKFNLKVYLKNHQRLNHKMELFGVEEVFQCEYCSRTFTFECSLKRHLSLVHKVGGEKRVQCEICSKILTTTYSLTVHMRLHTGEKNYTCGVCGDKFSRSQNWSKPSDIIGRRVTINKTKRRGTALGKLILQLDEDSSCDWTEDDEWLVEVESDKPKKKQDKSGLCPQCGRVVLDLRSHVKSHANVHSCDKCFINFKNEKLLNEHLEVHETDNPQKCDLCNLIFKDVTKLALHRHVHTGSYDCPICGFMATSKFRNSIIAHIKRHENNYSVRCHICNRGFLCKKKLEEHIEWHENIPKYKCEICHKKFAVKSYLTLHNKFNHKKELYGTEETFQCELCGRKFTFEKSFKRHLSCIHKVGKDHTVKCPVCDKTIANNHNLKKHMRVHTGEKNYSCDVCGKTFSQRQYVTRHQKVHQAEREARRKGAGRGEPKESQCKHFGEAHAHITIKQEYLYLEDQDSKGRKVKRKLLIKRNHWSDDDKPKPRRMRIKKEEPKSPPKLPKNQKANMWTCKFCFQTFDTRKEMFEHRKEHADEDKPKMQPDDVAKYTYDEEAEIYICSNCSAECQDLDEIEKHVMTHEKKFSCYVCHEDQFGPMNYAVHVQKHREDKMFPCPWCQYMSHKKEAMQVHINRLHLQIYDFQCTKCGKCFNDALSFKEHDNVHLNIKPFGCVVCSKHFYYSRYLHSHQLRTHTVRVLDPESKTQCNICQKIFARVDTLEKHYAAKHLTVRTGPYEKKHLCDVCGQGFSRPDKLKIHYRKHTGEKPYSCVYCSKSFIKRDYLIMHERIHSGEKPYSCEFCGKCFNQGAPLRIHLRSHTGERPYICPYCGAGSVSRGALNSHIKSCISTSQVLTNND
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -