Basic Information

Insect: Orchestes rusci
Gene Symbol: -
Assembly: GCA_958502075.1
Location: OY293311.1:29361939-29380499[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.00038 0.062 15.4 0.7 2 23 122 144 121 144 0.93

2 28 2.2e-05 0.0036 19.3 2.3 1 23 157 180 157 180 0.96

3 28 0.00041 0.066 15.3 6.1 1 23 187 210 187 210 0.91

4 28 8.8e-05 0.014 17.4 4.8 1 23 223 246 223 246 0.98

5 28 0.0006 0.096 14.8 6.4 3 23 255 276 253 276 0.98

6 28 0.002 0.33 13.1 3.6 1 23 283 305 283 306 0.95

7 28 0.052 8.3 8.7 3.3 1 13 313 325 313 327 0.91

8 28 1.7 2.7e+02 3.9 3.1 1 23 391 414 391 414 0.96

9 28 1.4e-07 2.2e-05 26.2 2.7 1 21 421 441 421 442 0.95

10 28 0.059 9.5 8.5 1.3 1 15 453 467 453 470 0.89

11 28 0.0016 0.26 13.4 0.2 2 22 590 610 589 612 0.89

12 28 0.02 3.3 9.9 4.0 1 23 624 647 624 647 0.97

13 28 4.4e-05 0.007 18.3 3.3 1 23 654 677 654 677 0.98

14 28 1e-06 0.00017 23.4 1.9 1 23 684 707 684 707 0.98

15 28 0.0016 0.26 13.4 0.2 2 22 804 824 803 826 0.89

16 28 0.36 58 6.0 1.4 2 13 839 850 838 852 0.88

17 28 4.5e-06 0.00072 21.5 2.4 1 23 916 939 916 939 0.98

18 28 0.11 17 7.7 0.8 1 23 946 969 946 969 0.97

19 28 0.14 22 7.3 2.1 1 13 978 990 978 991 0.90

20 28 0.0016 0.26 13.4 0.2 2 22 1060 1080 1059 1082 0.89

21 28 0.02 3.3 9.9 4.0 1 23 1094 1117 1094 1117 0.97

22 28 4.4e-05 0.007 18.3 3.3 1 23 1124 1147 1124 1147 0.98

23 28 3.8e-06 0.00062 21.7 3.6 1 23 1154 1177 1154 1177 0.98

24 28 1e-05 0.0016 20.3 2.4 1 23 1184 1207 1184 1207 0.98

25 28 2.1e-05 0.0034 19.3 1.3 2 23 1215 1237 1214 1237 0.96

26 28 5.3e-06 0.00085 21.2 2.9 1 22 1244 1265 1244 1265 0.97

27 28 0.52 85 5.5 0.3 1 23 1274 1297 1274 1297 0.90

28 28 0.00012 0.019 17.0 0.4 1 23 1306 1329 1306 1329 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.00038	0.062	15.4	0.7	2	23	122	144	121	144	0.93
2	28	2.2e-05	0.0036	19.3	2.3	1	23	157	180	157	180	0.96
3	28	0.00041	0.066	15.3	6.1	1	23	187	210	187	210	0.91
4	28	8.8e-05	0.014	17.4	4.8	1	23	223	246	223	246	0.98
5	28	0.0006	0.096	14.8	6.4	3	23	255	276	253	276	0.98
6	28	0.002	0.33	13.1	3.6	1	23	283	305	283	306	0.95
7	28	0.052	8.3	8.7	3.3	1	13	313	325	313	327	0.91
8	28	1.7	2.7e+02	3.9	3.1	1	23	391	414	391	414	0.96
9	28	1.4e-07	2.2e-05	26.2	2.7	1	21	421	441	421	442	0.95
10	28	0.059	9.5	8.5	1.3	1	15	453	467	453	470	0.89
11	28	0.0016	0.26	13.4	0.2	2	22	590	610	589	612	0.89
12	28	0.02	3.3	9.9	4.0	1	23	624	647	624	647	0.97
13	28	4.4e-05	0.007	18.3	3.3	1	23	654	677	654	677	0.98
14	28	1e-06	0.00017	23.4	1.9	1	23	684	707	684	707	0.98
15	28	0.0016	0.26	13.4	0.2	2	22	804	824	803	826	0.89
16	28	0.36	58	6.0	1.4	2	13	839	850	838	852	0.88
17	28	4.5e-06	0.00072	21.5	2.4	1	23	916	939	916	939	0.98
18	28	0.11	17	7.7	0.8	1	23	946	969	946	969	0.97
19	28	0.14	22	7.3	2.1	1	13	978	990	978	991	0.90
20	28	0.0016	0.26	13.4	0.2	2	22	1060	1080	1059	1082	0.89
21	28	0.02	3.3	9.9	4.0	1	23	1094	1117	1094	1117	0.97
22	28	4.4e-05	0.007	18.3	3.3	1	23	1124	1147	1124	1147	0.98
23	28	3.8e-06	0.00062	21.7	3.6	1	23	1154	1177	1154	1177	0.98
24	28	1e-05	0.0016	20.3	2.4	1	23	1184	1207	1184	1207	0.98
25	28	2.1e-05	0.0034	19.3	1.3	2	23	1215	1237	1214	1237	0.96
26	28	5.3e-06	0.00085	21.2	2.9	1	22	1244	1265	1244	1265	0.97
27	28	0.52	85	5.5	0.3	1	23	1274	1297	1274	1297	0.90
28	28	0.00012	0.019	17.0	0.4	1	23	1306	1329	1306	1329	0.96

Sequence Information

Coding Sequence: ATGTATGGTGTGGCTATGAACGACGACCAGAAAAAGTTACAGGCAACAAGAGCTTGCGAGCAGTTGGTAGCTCAAAAACCTACAACTGATCCTCAAAACATGGCAAGTCCCTCCAACATTAACAATGTTTTAAGGTCCAAGACGAAGGGAAGACACAATACTCCAATCCTCCAGATCCTGGACATGAGTGGGGGAATCAAGTTAACaatcaaagaagaaatacttgaaatcaaagaagaaaaactctTTCTCTCTCCATCTCTCACTAAGGAAGACAGCCCCAATCCCTTCGATATCCAAACAGAAGACTGTAACAACGATGAAGCCAACGAAAAACTACATATGAAGAATCGCAAGGAATTGAGCTGCAACATTTGTCATGCCTCGTTTGCATACCTAAAAGAGTTGAAACGTCATCTTAACGACATCCATGCGATAAACAACTCATATGGATACGAGCCGCCAACGTTCACATGCCAAGATTGTAGTAAGACATTTGGGAATAAGCTCAACCTGGCAAGACACATAAGGGCATGCCACCCAAAAGAAAAGGTAACATTTGAATGCCATATTTGTGATAAGAAATTTAAACAGAAGTGTTATTTGAAGCAGCATTTCCTGGGGGTCCATTCAGGAAAAAAACGACCGTCACGTCAAAGAGGAACGTTCACGTGCCACGTCTGCAGTAAGACGTTCAATTATAAGAACGGTTTGGCAGAACACATTAGGACATGCCACTCAGAAGAAAAGATAAGTTTTGGATGCCATGACTGTAGTAAGACTTTCCTGTATAGGAGCAATTTGAGAAAACACATTAGGACATGCCACTCAGAAGAACAGATGAAATTTGAATGCCATGATTGTAGTAAGAGGTTCCTGTATAGGAGCAATTTGGCAGAACACATCGGGAGACACCACTCAAAAGAAAAGATAAGATTTAAATGCCATGATTGTAGTAAGACGTTTAAACGACACAACACTTCAAGCCCCCAGATCCTGGAAATGGGTGGAGGGGTCAAGTTAATAATCGAAGAGGACATACTTGACTTCAAAGAAGACAAGCTCTCTCTTTCCCGAACTCCCACTGAGAAAGACAGCACCAATCAGTTTGATTGTCAAACAAATGATAACATTAACGATGAAGCCAACGGAAGAATACAGCGGCCAACGTTCACATGTCTCGATTGTAGTATGACATTCGGGTATAAACACATCATGGCAGAACACATCAATACATGCCACTCGAAAGGAAAGATAACTTTTGAATGCCATATTTGTGGTAAGCACTTCAGACGAAAGTACAATCTGAATCGCCATATTATGATGATTTATTTAACTAACGAGCGACAGCCAACGTTCACATGTCAAGATTGTAGTAAGACGTTCGAGTATAAGAGCAGCATCAGGACATCCCACTCAGAAGAAAAGATAAAATTGGAGTGTCATATTTGTGCTAACCAATATAAATGGAAGAATGATTCAAGAATCCACATTCAGACTGTCCATTTACCAAACAAAGAACGGCCAACGTTCACATGTAGTAAGACATTTAGACGACATTATATCTCAAGTCTCCAGATCCTGGACATGGGTGGAGGAGTCAAGTTGATGATCAAAGAAGAAATGCTTGAGTTAAAAGAAGAAGAACTCCTTCTCCCTCCAACTCCTAGCAAAGAAGACAGCCTCAATCCCTTCGATATCCAAACAAAAGACAAAACTGATGAGGAAGGCAACGAAATTATACATAGGAGTGATGGTACAGTTTTGAGCTGCAACATTTGTCATGCTTCGTTTGCATATCTGGAAGAATTGAGACGCCACGTTGACGACATCCATTTGGCGAACAACCCAAGACACGAGCAGCCATTGTTCACATGTCAAGATTGTAGTAAGACGTTCTGGTACAAAAAATGCTTGGCAACACACATTACGACATCCCacgcaaaaaaaaagataaagttTGAATGCCAAAATTGTACTAAGACATACGGAGGTAAGGAAAACTTGAGAAGGCACATTAGGACATGCCATTCGGAAGAAAAGACAAGATTTGAATGCCATGATTGTAGTAAGACATTCAAGTCTAAGGGCGGTTTGGCAGAACACATTAGGACATTCCACTCTGAAGAAAAGAAAAGATTCATGTTACATAATATTGCTATTAGATTAGAAATAATGGATCATGTAAAGAATCGACGACACAATATCTCAAGCCTCCAGATCCTGAACATGGGTGGGGGactcaagttattgatcaaaGAAGAAATGCTTGAGTTAAAAGAAGAAGAACTCCTTCTCCCTCCAACTCCTTGCAAAGAAGACAGCCTCAATCCCTTCGATATCCAAACAAAAGACAATACTGATGAGGAAGGCAACGAAATAATACATAGGAATGATAGTTCAGTTTTGAGCTGCAACATTTGTCATGCTTCGTTCGCATATCTGGAAGAATTGAGACGCCACGTTGACGACATCCATTTGGCGAACAACCCAAGACACGAGCAGCCATTGTCCACATGTCAAGATTGTAGTAAGACGTTCAGACGACACAACACTTCAAGCCCCCAGATCTTGGAAATGGGTGGAGGGGTCAAGTTAATAATCGAAGAGGACATACTTGACTTCAAAGAAGACTTGCTCTCTCTTTCCCGAACTCCCACTGAGAAAGACAGCACCAATCAGTTTGATTGTCAAATAAATGATAACAACAACGATGAAGCCAACGTAAGAATACAGCGGCCAACGTTCACTTGTCAAGATTGTAGTAAGACGTTCGAGTATAAGAGCAGCATGCTAAGACACATCAGGACATCCCACTCAGAAGAAAAGATACAATTTGAGTGTCATATTTGTGCTAACCAATATAAATGGAAGAATGATTTAAGAATCCACATTCAGACTGTCCATTTACCAAACAAAGAACGGCCAACGTTCACATGCCAAGATTGTAGTAAGACATTTAGACGACATAATATCTCAAGTCTCCAGATCCTGGACATGGGTGGAGGAGTCAAGTTGATGATCAAAGAAGAAATGCTTGAGTTAAAAGAAGAAGAACTCCTTCTCCCTCCAACTCCTAGCAAAGAAGACAGCCTCAATCCCTTCGATATCCAAACAAAAGACAAAACTGATGAGGAAGGCAACGAAATTATACATAGGAGTGATGGTACAGTTTTGAGCTGCAACATTTGTCATGCTTCGTTTGCATATCTGGAAGAATTGAGACGCCACGTTGACGACATCCATTTGGCGAACAACCCAAGACACGAGCAGCCATTGTTCACATGTCAAGATTGTAGTAAGACGTTCTGGTACAAAAAATGCTTGGCAACACACATTACGACATCCCACGCAAAAGAAAAGATAAAGTTTGAATGCCAAAATTGTACTAAGACATACGGAGGTAAGGAAAACTTGAGAAGGCACATTAGGACATGCCATTCGGAAGAAAAGACAAGATTTGAATGCCATGATTGTAGTAAGACATTCAAGTCTAAGGGCGGTTTGGCAGAACACATTAGGACATGCCACTCTGAAGAAAAGACAAGATTTGAATGTCATGATTGTAGTAAGACGTTCGGGTACAAGAAAACCTTGGCAATACACATTAGGACATCCCACGCAAAAGAAAAGATGAAGCTTGAATGCCATGATTGTAGTAAGACGTTCAAGTCTAAGGCGGGTTTGGCAGGACACATTAGGAAATTTCATTCAAGGGGAAAGTTGGGATTTGAATGCCATGATTGTAGTAAGACATTCGGACATAAAGAAACCTTGAGAAGGCACATCAGGACTTGCCAgtcaaaagaaaagaaaagatttGAATGCTTTATTTGTGACAAGCAATATCAATGGAAAATAGATTTGACAATCCACAACCAGAGTGTTCATTCACCGGATGAACCACGCCCAACGTTTACATGCCAAGATTGTAGTAAGACATTCGGGTACAAGATCAGTTTGGCAGAACACATAAGGGCATCCCACGCAAAAGAAAATATAGGAGCGAACAAACGATGTTCGGAAATAAAcgaatcttga
Protein Sequence: MYGVAMNDDQKKLQATRACEQLVAQKPTTDPQNMASPSNINNVLRSKTKGRHNTPILQILDMSGGIKLTIKEEILEIKEEKLFLSPSLTKEDSPNPFDIQTEDCNNDEANEKLHMKNRKELSCNICHASFAYLKELKRHLNDIHAINNSYGYEPPTFTCQDCSKTFGNKLNLARHIRACHPKEKVTFECHICDKKFKQKCYLKQHFLGVHSGKKRPSRQRGTFTCHVCSKTFNYKNGLAEHIRTCHSEEKISFGCHDCSKTFLYRSNLRKHIRTCHSEEQMKFECHDCSKRFLYRSNLAEHIGRHHSKEKIRFKCHDCSKTFKRHNTSSPQILEMGGGVKLIIEEDILDFKEDKLSLSRTPTEKDSTNQFDCQTNDNINDEANGRIQRPTFTCLDCSMTFGYKHIMAEHINTCHSKGKITFECHICGKHFRRKYNLNRHIMMIYLTNERQPTFTCQDCSKTFEYKSSIRTSHSEEKIKLECHICANQYKWKNDSRIHIQTVHLPNKERPTFTCSKTFRRHYISSLQILDMGGGVKLMIKEEMLELKEEELLLPPTPSKEDSLNPFDIQTKDKTDEEGNEIIHRSDGTVLSCNICHASFAYLEELRRHVDDIHLANNPRHEQPLFTCQDCSKTFWYKKCLATHITTSHAKKKIKFECQNCTKTYGGKENLRRHIRTCHSEEKTRFECHDCSKTFKSKGGLAEHIRTFHSEEKKRFMLHNIAIRLEIMDHVKNRRHNISSLQILNMGGGLKLLIKEEMLELKEEELLLPPTPCKEDSLNPFDIQTKDNTDEEGNEIIHRNDSSVLSCNICHASFAYLEELRRHVDDIHLANNPRHEQPLSTCQDCSKTFRRHNTSSPQILEMGGGVKLIIEEDILDFKEDLLSLSRTPTEKDSTNQFDCQINDNNNDEANVRIQRPTFTCQDCSKTFEYKSSMLRHIRTSHSEEKIQFECHICANQYKWKNDLRIHIQTVHLPNKERPTFTCQDCSKTFRRHNISSLQILDMGGGVKLMIKEEMLELKEEELLLPPTPSKEDSLNPFDIQTKDKTDEEGNEIIHRSDGTVLSCNICHASFAYLEELRRHVDDIHLANNPRHEQPLFTCQDCSKTFWYKKCLATHITTSHAKEKIKFECQNCTKTYGGKENLRRHIRTCHSEEKTRFECHDCSKTFKSKGGLAEHIRTCHSEEKTRFECHDCSKTFGYKKTLAIHIRTSHAKEKMKLECHDCSKTFKSKAGLAGHIRKFHSRGKLGFECHDCSKTFGHKETLRRHIRTCQSKEKKRFECFICDKQYQWKIDLTIHNQSVHSPDEPRPTFTCQDCSKTFGYKISLAEHIRASHAKENIGANKRCSEINES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -