Orus045338.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Orchestes rusci
Gene Symbol
-
Assembly
GCA_958502075.1
Location
OY293311.1:29269300-29284894[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 38 0.0005 0.081 15.0 4.0 1 23 48 71 48 71 0.98
2 38 2.3e-05 0.0037 19.2 4.1 2 23 79 101 78 101 0.95
3 38 0.0041 0.66 12.1 1.9 3 23 110 131 108 131 0.91
4 38 1.3e-05 0.0021 20.0 2.7 2 23 139 161 138 161 0.94
5 38 1.5e-05 0.0023 19.8 2.1 2 23 169 191 168 191 0.96
6 38 8.1e-05 0.013 17.5 4.0 2 23 199 221 198 221 0.94
7 38 0.00067 0.11 14.6 3.6 3 21 230 248 228 249 0.94
8 38 0.0012 0.2 13.8 2.5 1 23 288 311 288 311 0.92
9 38 0.044 7.1 8.9 6.6 2 23 317 339 316 339 0.96
10 38 3.8e-06 0.00062 21.7 2.4 2 23 347 369 346 369 0.96
11 38 0.0096 1.6 11.0 9.7 2 23 377 399 376 399 0.96
12 38 2.3e-05 0.0038 19.2 1.4 2 23 407 429 406 429 0.96
13 38 4.8e-05 0.0077 18.2 0.6 2 21 436 455 435 456 0.94
14 38 0.0049 0.8 11.9 6.1 2 23 479 501 478 501 0.96
15 38 0.0038 0.61 12.2 1.4 2 23 508 530 507 530 0.96
16 38 0.00046 0.074 15.1 0.8 1 23 537 560 537 560 0.96
17 38 0.00033 0.053 15.6 0.5 1 23 612 635 612 635 0.97
18 38 0.0023 0.37 12.9 4.0 1 23 642 665 642 665 0.96
19 38 4.7e-06 0.00077 21.4 3.8 1 23 672 695 672 695 0.96
20 38 0.00077 0.12 14.4 0.7 2 23 700 722 699 722 0.91
21 38 0.00023 0.037 16.1 0.9 2 23 730 752 729 752 0.97
22 38 0.00026 0.041 15.9 3.2 1 23 768 791 768 791 0.98
23 38 0.82 1.3e+02 4.9 8.4 1 23 870 893 870 893 0.97
24 38 5.8e-05 0.0094 18.0 0.3 1 23 900 923 900 923 0.96
25 38 0.01 1.6 10.9 1.4 2 23 928 950 927 950 0.92
26 38 1.3e-06 0.0002 23.2 2.4 1 23 957 979 957 979 0.99
27 38 0.00011 0.017 17.1 0.3 2 23 984 1006 983 1006 0.94
28 38 0.00039 0.063 15.3 1.2 2 23 1014 1035 1013 1036 0.94
29 38 0.11 17 7.7 3.1 1 23 1060 1083 1060 1083 0.97
30 38 3.9e-06 0.00063 21.6 2.6 2 23 1091 1113 1090 1113 0.97
31 38 0.00022 0.035 16.2 3.0 2 23 1120 1142 1119 1142 0.96
32 38 0.0071 1.1 11.4 5.1 1 23 1149 1172 1149 1172 0.96
33 38 0.0016 0.26 13.4 8.8 1 23 1178 1201 1178 1201 0.96
34 38 6.6e-06 0.0011 20.9 4.8 1 23 1215 1238 1215 1238 0.97
35 38 1.8e-05 0.0029 19.5 3.8 2 23 1257 1279 1256 1279 0.96
36 38 0.00085 0.14 14.3 8.2 1 23 1286 1309 1286 1309 0.96
37 38 9.7e-05 0.016 17.2 3.5 1 23 1316 1339 1316 1339 0.98
38 38 0.00016 0.026 16.6 0.9 1 23 1345 1368 1345 1368 0.97

Sequence Information

Coding Sequence
atgattttaattaaaaaagaagaagaCTTCAACTTCGATGAACCTGAATTCCTCACAGAAGAACAATTTGCCATCAAAGCAGAAATTAttgacatcaaagaagaaacaTGTAACATGGATGACGGTGGACCAATCAACCCATTCAAATGCGAATTTTGTGCCAAGTCCTTCAAGCTAAAACACTACCTGAACGTCCACATTAAAAGACTACATTCGCAAAACCCTGATCAATTAAAATGCGACTTTTGCGGCAAGTCTTTCAAGCATATCGACAATTTTCGCAAACACATCCGATTCCAACACTCTGAAGCAGCCGCAACATTAAACTGTGCTGCCTGTTCCAAGTCTTTCAAACACCAAAGAGACTTATATCGACACACCAAGGCCGTTCACAAGGACGACTCCGATCAATGgaaatgtgacatttgtgatAAATGTTTCAAGTACAAAAACACCCTGAAACGGCATGTTTCAATCGAACATTCACAGgacaataaaattatcaaatgtgaattttgcgacaagtCTTTCAAGTATCAAACCCACTTGAATGCGCATGTTCAAAGTCTTCATTCGGACAATCCTGAACGGTTGAAATGCGATGTTTGTGACAAGTCTTTTAAGCATATTGATTATTTTCGAAAGCATATGAAGTTTCAGCATTCGGTGGTTGCTGAGAGAATGGATTGTGAGTTTTGTAGCAAGTGTTTTAAGCATAAAAAAGACTTACGTCAGCATATTAATATAATTCTAATGAAAATGTGTTTCAGATCAGCAACTATTTTAATCAAACAAGAAGCCCTTGATGAAGAAATGCACATCAAACACGAACTAGTTGATGTCAGAGAACAAACTGGCAAATTCCAGTGTGATTTATGTGATGAATCATTCACATATCACAAAGGCCTTAAGGCTCACAAATACCTACAACACcccaatacaaaaatcaaatgtaaatcTTGTCACAGAATTTTCAAGCACAAACGCAATTTTGACGTCCATGTTAAAAGACAACATTCGGACAACATCGAGCTATTAAAGTGTCATTTGTGTGAAAAAGTCTTCAAGTACAGCACCAATCTGACAAGACATGTTAGAATTGATCACTCCACGGACAATGCTCGTgtgaaatgtgaattttgcgaccGGTTTTTCAAGCATAAACATCACTTGCATGCCCATGTTAAGAAACTTCACACGGACAAACCTGAGCTGTTGaagtgtgatttttgtgataagaGTTTCAAGTATAGCACGAGTTTGAAAGTGCATGTCAAGATATATCATTTGAAGGACGAGGGGGTCAAGTGTGATATTTGTGATAAGTCTTTCAAGCATGAGAACTACTTGACTGCGCATGTCAAGAGGCTCAAGCAAGAACTTGACAAAGATGACATTCCAGACGTCTCCATCGACAGTCAACATTACACATGGAAGTGCAGGTTCTGCGATAAATCATTCAGATACAAATGCCATGTGCAAGTGCACATCCAACGATCACATTCAGATGAGCAAAGACTCAAGTGTGACTTGTGCAGTAAGACTTTGAAGAATAAGTTTACATGGATTAAGCATGTTAGGATGCAGCACACGGATCAAAAGATGGTTTTTCAGTGCAAAGTTTGCGAAAAGTTGTTTAAACAGGAGCGTACTCTGGAAAACCATGTCGAGAAATGGCATTCGAGTAGATTATCTACATATATATGTGGGGAAACTGAAAAAAACTTGGAATACATCAAACAGGAACCACTTGACATCAAAGAAGAATCACTTGACGCTTATGAAGAATTTCACATCAATGACGAAATTGACGTTAATGTCACTGAAGCAGGATTCAAGTGTGATTCTTGTGATAAATCTTTCGACCTCAACAGCTTTCTTGAAATACATGTCAACAAAGCTCACTCAATTGTCAGAAAGCGGTTCAACTGTGAATTTTGTCACAAGACTTTCGATCGTAAGCTCAACATGAAAGACCATGTTAATAGACTACACTTACCCAATCCTGAACTATTCAAGTGCGACTTTTGTGACAGGTCATTTAACCACAAAACCAATCTCAATAGGCATCTTAAAGCAATTCACTCAACCAGTACCAAGTGTGAATTTTGTGAGAAGATTTTCAAGAATAAATTCTACTTGAAAGTCCACGTTGAAGCAGTACATCAGTCTAATCGTGAGTCATCAAAATGCGACTTTTGTGACATGTCTTTTAAGCGTAAAGACGTTTTAGACAGACATGTCAGAGTTCAACATTTGGGAGTTGTTGAGAAACATACTAAAACCAATCACTTCATTGAtttcaagtgtgaattttgcaaCAAGACTTTCATGAATGAACGCTACTTGAAAAGTCATGTTAAAAGACTACACCTGCCCATTAATGAACTATCAAAGtgcgaACTACCTACATATATATGTGAAGAAACTCaacaaaaattcatcaaacagGAACCACTTGACATCAAAGAAGAATCACTCGACAGCCATGAAGAACTTGacgagaatgaaaaaaaaataaactttggtGTCAATGAAGTCAGCGATCAAGCCAAAAAATCTTTCGAGCTCAACAGTCTTCTTGAAGATCATGGTGACAAAGTCCACTTCAACTGTAAATTTTGCCACAAGACTCTCAAGTGTAAGTCCAGCTTGAGAAGCCATGTTAAAAGACTACACTTGCCCAATCCTGAACTATTCAAGTGCTACCTTTGTGACAGGTCTTTTGACCAGAAAATCAATCTCGCTAGTCATCTTGAAGTGATCCACTCAACCAGTATCAAGTGTGAGTTATGTGACAAGATTTTCAAGAGTAAATTTGCTTTGAAATGCCACGTTGAAATGGTGCACTTGCCCACTCCTGTTCTATTCAAGTGCAACTTTTGTGACAGGTCTTTCAACCAGAAAGCCAATCTCATCAGCCATCTTAAAAGACACTCAACCAGTATGAAGTGTGAGTTATGTGACAAAGTGTTCAAGAATGAATTCTACTTGAAAGTCCATGTACAGGAAGTACATCAGTCCAATCTTGAGccaataaaatgcaacttttgtgACAAGCCTTTCAAGCGTGAAGACGTTTTGGACAAACATGTCAGAGCTCATCATTTGGGAGTTGTTGAGGTCAGCAAGTCTTTTAAGCAGACGGAGCATGTTAAAATCAATGAGTTCGGTGATTTTAAATGTGGATCTTGCCACAAGACTTTCCTCAATGAACGCTACTTGAAAGGTCATGTTAAAAGAATACACCTGCCCATTAAAAAACTATCCAAGtgcgagttttgtgacaagactttcaaaaataaagacCTTTTACGCAATCATGTCAGACGTCAACATACCGATGATGAGAAAGTTACATGcgaattttgtgaaaagtgTTTCATGCGGAGAAGCAATCTTGACAGGCATGTCAAATCACTGCACTTATCCAGTGATGGAAGGTTCAACTGTGAATTTTGTGACAGTACTTTTAAGCATAAAGAGTCCTTGACAGTACATTTTAAAAGAAAACATCAGCCCATTGTTGGACATACCTGCGAATTTTGCGGAAAGTCTTTTGAGCATAAACACTACTTGACAGCTCATTTTAAGAGAAAACATCAGCCCATTGTTGCAGGTCAACATACGCAAGGTGAAAGATTCACCTGCGAATTCTGCGAAAAGTCCTTCAAGCAGCATAGCTATCTTAAAAGACATATTAAAGTAAATCACTTGACCATCAGGGATGAAAGTTTGAGAGTTCAACGTACCTATTTTGAGAAAGTCACATgccaattttgtcaaaagtctTTCAAGCAGAAAAGCCATCTTGTCAGGCATGTTAAGTCACTGCACTTAACCAGTGATAGAAGGTTCAACTGTGAGTcttgcgacaagactttcaagcataaaTACCACTTGACAGTCCATTTTAAAAGAAAACATCAGCCCATTACGGAGTTATTTAAATGCAGGTTTTGTGGCAAGTCTTTTAAATACAGAGACACTTTTCTTATACATGTCAGGCGTCAACATACGGAAGTTGAGAAGTTCTCCTGCGACTTATGTCCAGAGTCTTTCAAGCACATCGCCAATCTCAATGAGCATGTTAAATCAAAGCATTCAACCAACAAAAATAATGCTTGA
Protein Sequence
MILIKKEEDFNFDEPEFLTEEQFAIKAEIIDIKEETCNMDDGGPINPFKCEFCAKSFKLKHYLNVHIKRLHSQNPDQLKCDFCGKSFKHIDNFRKHIRFQHSEAAATLNCAACSKSFKHQRDLYRHTKAVHKDDSDQWKCDICDKCFKYKNTLKRHVSIEHSQDNKIIKCEFCDKSFKYQTHLNAHVQSLHSDNPERLKCDVCDKSFKHIDYFRKHMKFQHSVVAERMDCEFCSKCFKHKKDLRQHINIILMKMCFRSATILIKQEALDEEMHIKHELVDVREQTGKFQCDLCDESFTYHKGLKAHKYLQHPNTKIKCKSCHRIFKHKRNFDVHVKRQHSDNIELLKCHLCEKVFKYSTNLTRHVRIDHSTDNARVKCEFCDRFFKHKHHLHAHVKKLHTDKPELLKCDFCDKSFKYSTSLKVHVKIYHLKDEGVKCDICDKSFKHENYLTAHVKRLKQELDKDDIPDVSIDSQHYTWKCRFCDKSFRYKCHVQVHIQRSHSDEQRLKCDLCSKTLKNKFTWIKHVRMQHTDQKMVFQCKVCEKLFKQERTLENHVEKWHSSRLSTYICGETEKNLEYIKQEPLDIKEESLDAYEEFHINDEIDVNVTEAGFKCDSCDKSFDLNSFLEIHVNKAHSIVRKRFNCEFCHKTFDRKLNMKDHVNRLHLPNPELFKCDFCDRSFNHKTNLNRHLKAIHSTSTKCEFCEKIFKNKFYLKVHVEAVHQSNRESSKCDFCDMSFKRKDVLDRHVRVQHLGVVEKHTKTNHFIDFKCEFCNKTFMNERYLKSHVKRLHLPINELSKCELPTYICEETQQKFIKQEPLDIKEESLDSHEELDENEKKINFGVNEVSDQAKKSFELNSLLEDHGDKVHFNCKFCHKTLKCKSSLRSHVKRLHLPNPELFKCYLCDRSFDQKINLASHLEVIHSTSIKCELCDKIFKSKFALKCHVEMVHLPTPVLFKCNFCDRSFNQKANLISHLKRHSTSMKCELCDKVFKNEFYLKVHVQEVHQSNLEPIKCNFCDKPFKREDVLDKHVRAHHLGVVEVSKSFKQTEHVKINEFGDFKCGSCHKTFLNERYLKGHVKRIHLPIKKLSKCEFCDKTFKNKDLLRNHVRRQHTDDEKVTCEFCEKCFMRRSNLDRHVKSLHLSSDGRFNCEFCDSTFKHKESLTVHFKRKHQPIVGHTCEFCGKSFEHKHYLTAHFKRKHQPIVAGQHTQGERFTCEFCEKSFKQHSYLKRHIKVNHLTIRDESLRVQRTYFEKVTCQFCQKSFKQKSHLVRHVKSLHLTSDRRFNCESCDKTFKHKYHLTVHFKRKHQPITELFKCRFCGKSFKYRDTFLIHVRRQHTEVEKFSCDLCPESFKHIANLNEHVKSKHSTNKNNA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-