Orus045342.1
Basic Information
- Insect
- Orchestes rusci
- Gene Symbol
- -
- Assembly
- GCA_958502075.1
- Location
- OY293311.1:29327582-29332041[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 8.2 1.5e+04 -2.3 0.6 14 26 41 53 36 68 0.72 2 9 0.031 57 5.4 0.4 13 28 71 86 51 87 0.82 3 9 0.0059 11 7.8 1.9 7 38 101 127 99 133 0.70 4 9 0.23 4.3e+02 2.7 3.7 15 43 138 163 129 164 0.77 5 9 0.0079 15 7.4 0.6 16 43 168 191 166 192 0.93 6 9 0.15 2.8e+02 3.2 2.8 12 27 189 204 185 216 0.85 7 9 1e-05 0.019 16.6 1.0 5 43 275 309 274 310 0.94 8 9 0.0068 13 7.6 0.4 17 43 316 339 311 340 0.91 9 9 6.7e-05 0.12 14.0 0.1 18 44 347 370 343 370 0.93
Sequence Information
- Coding Sequence
- ATGATTTTTCTTGCCCGAATCTACATGCACTTTTCCAGACTTAATCCACAAGATGTTTTGATTGTAATGAAAGAAGAGCCCATTGTCATCAAGGAAGAACTTATGGATATTCCAAATCTGGATACAAATTACAAATGTGAATGCTGTCCCAGATATTTCCGCTCAGAAAACCATGTGAACTTCCATGTTAGGATGGCGCACAGACAAAAAAAGCCCAAAACTTTACAGTGTGGCTTTTGCGATAAGACTTATGCTTATATcttcaTGGAACCAAAACTAGAACCCTTAGACTCACCAGACTTTTACCAGCTAGAAGACAAACGCTTTCACTGTGGCTTCTGTGACaaaacctacaaaaaaaaattcaccttGCAATCCCACATTATTTATCACCATTCGGACTCCAAGCCTGAACGGTTCAAGTGTGAACATTGTGATAAGTCTTTCGCCCACATGGGACGTTTGAGGATCCATGTGAGGGACAAGCATGTGGGCTGTGACATGGTCGAGTGTGAACAATGTGGGGAAACCGTTTCGGAACATAATATGAACATACACGTTAGAACTCAACATGGAAGGTTCAAGTGTAGTCTGTGCAATAAGACTTTTGTGCTTGAAAAAAGTTTCCATGCTCACTTCAAGAAGCATTCGGAAATTAGGGCGATTTCCTCTTCAATCATAAAGAAATTGAAGCTAAAACCAATCAAAGAAGAACCTCCCGATACACCAGACTTGATCTCCATTCCTCTTCGACCTGAAGAATTCCAATGCGACTTCTGTGCCCTAACCTACAGATTCCGAGCCACTTTGCTTCGCCATCAGAAATACTTCCATCCCAATGAGGAAgtcaaaaaactcaaatgtcaattttgtGACAAGTCTTATAAGAATATACGAGGTCTTCAATGGCATATAAGATCAGCACACACCACCGAGCCTAAAGAATTCACTTGTGACATTTGTAAGACGATTTTAAAAAGTAAAGAATATTTGAAACTTCACATGAAGCGGCAGCATTTGGAACCGATTCAAACTCTCaattgtggtttttgtggtaaAACTTTCAAGTATAAGTGGAACATGACCAAGCATGTTCGGGATTTTCATCCGGAATTGTTGGTTACTATACTTAAGAAGCGAGTTCAGAAAAGTCAAATGGATGTactttga
- Protein Sequence
- MIFLARIYMHFSRLNPQDVLIVMKEEPIVIKEELMDIPNLDTNYKCECCPRYFRSENHVNFHVRMAHRQKKPKTLQCGFCDKTYAYIFMEPKLEPLDSPDFYQLEDKRFHCGFCDKTYKKKFTLQSHIIYHHSDSKPERFKCEHCDKSFAHMGRLRIHVRDKHVGCDMVECEQCGETVSEHNMNIHVRTQHGRFKCSLCNKTFVLEKSFHAHFKKHSEIRAISSSIIKKLKLKPIKEEPPDTPDLISIPLRPEEFQCDFCALTYRFRATLLRHQKYFHPNEEVKKLKCQFCDKSYKNIRGLQWHIRSAHTTEPKEFTCDICKTILKSKEYLKLHMKRQHLEPIQTLNCGFCGKTFKYKWNMTKHVRDFHPELLVTILKKRVQKSQMDVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01107930;
- 90% Identity
- iTF_01107930;
- 80% Identity
- iTF_01107930;