Orus045335.1
Basic Information
- Insect
- Orchestes rusci
- Gene Symbol
- -
- Assembly
- GCA_958502075.1
- Location
- OY293311.1:29248576-29254937[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0047 8.7 8.1 0.0 17 44 8 32 4 32 0.91 2 14 1.2 2.2e+03 0.4 2.6 18 29 38 49 33 59 0.81 3 14 0.89 1.6e+03 0.8 1.4 6 39 55 85 51 89 0.73 4 14 0.062 1.1e+02 4.5 0.0 17 44 137 161 129 161 0.85 5 14 0.77 1.4e+03 1.0 3.3 18 44 168 191 162 191 0.83 6 14 0.0011 2 10.1 0.1 18 43 198 220 194 221 0.93 7 14 0.0015 2.7 9.7 1.1 17 41 227 248 224 249 0.91 8 14 0.0035 6.4 8.5 0.1 17 44 310 334 300 334 0.88 9 14 0.0085 16 7.3 2.3 16 43 339 363 336 367 0.83 10 14 0.047 87 4.9 3.3 16 41 369 391 361 394 0.81 11 14 0.007 13 7.5 3.7 4 44 386 423 384 423 0.85 12 14 0.0042 7.7 8.2 1.2 17 43 427 450 425 451 0.89 13 14 0.1 1.9e+02 3.8 4.7 5 29 444 468 442 477 0.79 14 14 0.0044 8.1 8.2 2.8 5 43 472 505 468 506 0.85
Sequence Information
- Coding Sequence
- ATGCTCAGTGACCCAGCAAGATTCAAGTGTGATATTTGTGATAAATCTTTCAAGGTCAAGAACAGTCTTATCAGACATGTCAACCAATTTCACTCAGTCAAGGAAAGTTTCAACTGTGAATTTTGCGGCAAGACTTGCGCCAATAAATACTACTTGCAAGCCCATGTCAAAAGACATCAGTCCATTTTGGAACCATTAAAATGCGAGTCTTGTGACAAGAGCTTCAAGAATAAACAGATTCTTCGCAAGCATATCAAATTTTTACATCTCAGTGACATCAAAGAAGAGGAACCACTTGACATAAAAGAAGAAACAATGGACTTGCATGATGATGAAACGCAATTCGAAAAAATACTCAACGACCAAGCAGACGTCCAAGAGGAAACAATGGACTTGAGTGATGATGAATTCAAATGTGATATTTGTGATAAATCGTTCGAGGTCAAACGCTATCTCATCAATCATGTCAACAGAGTGCACTCAACAGTGAAGGAAAGACTCaactgtgaattttgcgacaaaaACTTCTATCATAGATGCGACTTGAAAGCCCATGTTAAAAGACAACATCAGCCAATTCTAGAACTATTACAGTGCGAGTTCTGCGACAAGTCTTTTAAGGATAAGAGCAATTTTAGCAGACATGTAAAATTTCAGCATACGGAAGCTTTTGAGAGAGTTTCTTGCAATGTCTGTGAAAAGACTTTCAAATCTAAATGCAATCTTAAGATGCATATTAGAAGACCAACAACATGTGAAGATATCTTGAAAGATATCAAAAAAGAGGAACCAGTTGAGATTGAAGAAGAAACAATGTTGATTGATGATGAGACGCAATTCAACGACCAAGcagacatcaaagaagaaaccATGAACTTGTGTGATGATGGAACGCAATTCGAGGAAATCCTCAGTGACCAAGCAGAATTCAAGTGTGATAGTTGTGATAAATCTTTCAAGGCCAAGAGGAATCTCATCATCCATGTCAAAAGACAACATCAGCCCATTTTAGAAGTAATAAAATGCAAGTTTTGTGACAAGAGCTATAAGCATAAAGAAGTTCTTCGCAAACATATCAAAGTTGAACATTTAACCagtggtgaaaatttcaagtgtGAAATCTGCAACAAGACTTTCAAGACTAAAGAATACTTGAAAAAGCATGTCAGAAGACATAAGCCCGTTATTGAACTACTAAAATGTGAGTTTTGTGACAAGACTATCAAGCATAAAGAAGACTTACAAAAGCATGTCCAAAGACAACACTCTGTTGGACTGGTAAAATGCGAGTTCTGCGACAAGACCTTTAAGAATAAACACATTTTAAGAAGTCATGTCAGATTCCAGCATTTGGAAACAGAGAGAGTTACTTGCGGATTTTGTGAAAAGTCTTTTTGTAGACGCTATTTCAAGAGTCATGTTGAAACATGCGATGTAAAAATTTTCAAGTGTGAGTTTTGTGAGACGATTTTGAAGGATAAGTCCTGCCTGCAAGATCACCAAAGGAGATTTCATTTGGACAAGCAAaccgtttga
- Protein Sequence
- MLSDPARFKCDICDKSFKVKNSLIRHVNQFHSVKESFNCEFCGKTCANKYYLQAHVKRHQSILEPLKCESCDKSFKNKQILRKHIKFLHLSDIKEEEPLDIKEETMDLHDDETQFEKILNDQADVQEETMDLSDDEFKCDICDKSFEVKRYLINHVNRVHSTVKERLNCEFCDKNFYHRCDLKAHVKRQHQPILELLQCEFCDKSFKDKSNFSRHVKFQHTEAFERVSCNVCEKTFKSKCNLKMHIRRPTTCEDILKDIKKEEPVEIEEETMLIDDETQFNDQADIKEETMNLCDDGTQFEEILSDQAEFKCDSCDKSFKAKRNLIIHVKRQHQPILEVIKCKFCDKSYKHKEVLRKHIKVEHLTSGENFKCEICNKTFKTKEYLKKHVRRHKPVIELLKCEFCDKTIKHKEDLQKHVQRQHSVGLVKCEFCDKTFKNKHILRSHVRFQHLETERVTCGFCEKSFCRRYFKSHVETCDVKIFKCEFCETILKDKSCLQDHQRRFHLDKQTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01107800;
- 90% Identity
- iTF_01107800;
- 80% Identity
- iTF_01107800;