Basic Information

Gene Symbol
-
Assembly
GCA_958502075.1
Location
OY293306.1:16110884-16134391[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.25 5.4e+02 2.4 0.1 23 45 281 305 273 306 0.73
2 6 1.2e-07 0.00024 22.7 0.2 1 35 312 348 312 356 0.95
3 6 2.3e-09 4.9e-06 28.2 0.0 2 43 366 411 365 414 0.92
4 6 8.6e-10 1.8e-06 29.6 0.0 1 45 422 466 422 467 0.95
5 6 1e-06 0.0021 19.7 0.0 4 43 476 515 473 517 0.93
6 6 2.9 6.2e+03 -1.0 0.1 25 39 830 844 829 845 0.91

Sequence Information

Coding Sequence
ATGGAATGCTCCCCGAACCCAGCCTTAGATACATGGTCGAAGGGAGCAACCGAAATCAATCACGAAAATGACTATCCATTATTGGATTCATCAGGATTTGGAGCACTAGACGACGATGATGTGATCTCTGCTCTGTCTGAGGAATATTCGGAGgacgAAGACTTTGACTTTGAGATTCCACCTCAGATTTTGTCAGATAGTGATATTGTGAAGATAAAATCTTCCGCACCACCACAACTGTCACCTTCTGAGAGAGAAACTGTTGACATATGTAAAGACCCACATTTGAAAGAACTATTGTTAATGAACAGAACCAAAGGGGGGTATTTTAAACAATTGTGGAGTTTCTACAATGGATTGTTGAAACAAACAGAGAAAGAATTGGCAATGACCAAGCAAAGTTTGATCCATAAATCAGAGGAGACCAAGGCCCTCAATAAAGGCAATGTATTTATATCTGAGAAACACCAATTTCTATTGCTTGCTCAACAGTCCTCTActaaattttacaaaattggAATTCCATACTTCAAGTCCAAAGATGGATTTCCATGTCCACGAAATCCAGATGCAATTGCCAAATATAACAAAAGACAGATCTTTCACTATGATATGACACCTAGTGTATGCTGGAATGATACGGCTATCTATAGGCTGATTGAGGCTGTTAAATTTCAATACCGAACCAATCGAGTCAGCGAGcttcaaaaagaaataaacaaaCTCAATTTTTGCGAATCGACagataaaaaaacgattaaagAACTCAGACACAGATGTGAGGCTATCGAAAAGGATCGATCGAGCCATCCACCTCTTGGTTCCGATAAATATATTGATTGGCACAAAGTTTCTACAAAGTTTCTGTGGGAAAAATTTTCAGAAGAAGATTGTCGTATTTTTTGGAACACATACGCACATCCTACTATCAACAAAAAACCATGGAGTAAAAACGAACTAGGAAAGTTGACAAGAATTGCCAACAAACATAAGAGACAAAATTGGGACAAGATTGCAGAAGAACTAGGACGAAATCGTACTGACTACCTGGCATGCGTTAAGTTCTTCAGTTCAAGTGACCGGCAGAATAAAGTCGGCAAATTCACTGGCGAAGAGGACGAAAAGCTTCTGAATCTGATCGAAACATACAGAAATGGTTCTTACATTCCTTGGTCGCAAATCGCAAGATCCTTCAAGCGTAGAACGCGCGAGCAGATTTTCTTTCGCTATACAtactttttgaaagaaaaaggaAACATAAGCAGAGAAAGATTCACTGAAGCTGAAGATGTACTGCTTCTCATCTTGGTTGAAAGATATGGCCCATCATTCTCCAAATGTGCCAAACATTTTCCGAATCGGTCGGCAATGCAGCTCAAAGCAAGATATACTTCCAATTTAAAaatgccaatcaaaaaatttGCATTTTCTGCGGAAGTTGATGAAGCTATTATGAAGCATGTCGAACAATATGGCCCACAAAACTGGAATGTGCTGGGATCGAAAATTCATCGGACTTCGCAGCAAATTATACAAAGATATAAGTTGCTGGAGAGTTTCAAGGCAGCTAATCCTGATGCTAATATCGTAAGCGCTCCTAGAAGAGTTCGTTATAGTAAAACTACGGATAAAGGACTTGATTATTTGTTaataattgcagattatttcaaaaatcgggAAAAAATCCCCCCTTTAGAGGAAATACAGATGTTGCTGGattgtgaaaaaattcaacatactAGAcgttattcacaaaaaaatattagagcTATGCAAGATTTGAACGAAATAACCGAAGATGAAACTTCTTCGAATACGCCTGAAGTATTCGCAGGAATTGATGATCTTatcatagattttttctatgatattgAGAAGGAGAAAGCAGCTAAAGAGATTATCAAGGATTGTTTGCCGGAACTGTCGGGAACTGTCAAAGAGCTTCTCAATACCCTTCAAGTTAATCTAAATATACCAAAAAACTTCGAAAATCATCCTGAACTAGACGATGTTGATAAGGAAATAATTAAAAACTTGATAGAGCACCAACAAACCAACATGGATGATGAGTTTGTTGTCAAGTGTGATGAACAAGGTATTAAGGAAGTGGTTCCTCCGAGTTTGCATACGCTGGTTGGATATCGAGGACTTTTGGCATTAGAGGACGAGTTTAGAAATGAACTTGCTAAATCCATTGGCCCAAATAAACCTGAAGGTGCAAACGAGTTAGAAGCAGAGGTGGACTTTTGCATTTCCGGCCACGTGTCCAATCTACTCAGTCCTGTGGGTGACAAAATAAGGACAGCCCGTGATAAATTCGCCATGCGGCTTTAttccattttcaaatttccaatgcTGATGTCTGAAACGCCACCAGAAACGATAGATGAGTCAACTAATGAAAACACGAATTCTCCAGAAAATCCAAGACCATTTGAATGCGTTTTTCTGAAAGATGATTTCCACGTTCGATCCGAACCCAAGACAAGCATAGCCGAAAAGCTCAAAAGAAAGATCGACGAAAGcattaaaaaattatcagaacCGCCAgcaaaaaagaaattttataCAGAAATAGAAGCTCCTCGGAAATCCGCCCCAATTTTAAAAGGAACGAAGGTTGAAGAATACTTTAGAAATGAATTGCGAGACAACAAATTAAACACTCGTACATTTGCTCATAAAGATCCTCTTTTGTTCAAAACATACTCCAAGAAGAAAGCGCCCGAAACCATTGTCAAAATTGAGGACGACGAAATGGAGGATCCTGCAATTGACGCGCCTGCTCAGAATGCAGAAGAGACATTATGTGAAATGAATGTTGAAGCAGCTTCTCCATTTGTTACGGGCTCGTTAGAGACGGACTTGCAGGAGTTGGCTGCTCTTGATAAATTGCTGAATAAGGAGAAAACAACGTGA
Protein Sequence
MECSPNPALDTWSKGATEINHENDYPLLDSSGFGALDDDDVISALSEEYSEDEDFDFEIPPQILSDSDIVKIKSSAPPQLSPSERETVDICKDPHLKELLLMNRTKGGYFKQLWSFYNGLLKQTEKELAMTKQSLIHKSEETKALNKGNVFISEKHQFLLLAQQSSTKFYKIGIPYFKSKDGFPCPRNPDAIAKYNKRQIFHYDMTPSVCWNDTAIYRLIEAVKFQYRTNRVSELQKEINKLNFCESTDKKTIKELRHRCEAIEKDRSSHPPLGSDKYIDWHKVSTKFLWEKFSEEDCRIFWNTYAHPTINKKPWSKNELGKLTRIANKHKRQNWDKIAEELGRNRTDYLACVKFFSSSDRQNKVGKFTGEEDEKLLNLIETYRNGSYIPWSQIARSFKRRTREQIFFRYTYFLKEKGNISRERFTEAEDVLLLILVERYGPSFSKCAKHFPNRSAMQLKARYTSNLKMPIKKFAFSAEVDEAIMKHVEQYGPQNWNVLGSKIHRTSQQIIQRYKLLESFKAANPDANIVSAPRRVRYSKTTDKGLDYLLIIADYFKNREKIPPLEEIQMLLDCEKIQHTRRYSQKNIRAMQDLNEITEDETSSNTPEVFAGIDDLIIDFFYDIEKEKAAKEIIKDCLPELSGTVKELLNTLQVNLNIPKNFENHPELDDVDKEIIKNLIEHQQTNMDDEFVVKCDEQGIKEVVPPSLHTLVGYRGLLALEDEFRNELAKSIGPNKPEGANELEAEVDFCISGHVSNLLSPVGDKIRTARDKFAMRLYSIFKFPMLMSETPPETIDESTNENTNSPENPRPFECVFLKDDFHVRSEPKTSIAEKLKRKIDESIKKLSEPPAKKKFYTEIEAPRKSAPILKGTKVEEYFRNELRDNKLNTRTFAHKDPLLFKTYSKKKAPETIVKIEDDEMEDPAIDAPAQNAEETLCEMNVEAASPFVTGSLETDLQELAALDKLLNKEKTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-