Orus022492.1
Basic Information
- Insect
- Orchestes rusci
- Gene Symbol
- HIBCH
- Assembly
- GCA_958502075.1
- Location
- OY293305.1:31802798-31813340[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-10 1e-07 33.1 0.0 2 43 6 47 5 49 0.93 2 2 2.6 1.1e+03 1.0 0.1 11 30 206 224 205 225 0.91
Sequence Information
- Coding Sequence
- ATGCTCATGTATTCCCAAGACGCTCTCAGAAGGGCGCTTACCCAAATCCAGGAACATGGCATGGGCATCAGAGAACCTAGTAGGAAATTCTCAGTACCCAAAACAACTTTGCAAGATAGGTTAAAGGGAAAAGTCCCTAAAAACCCTATGAAGACGGGGCCACCACCACGCCTAACAGTGAATGGGGAAAGAATTTCCACTCATCACATAGATAGTGCAGACCTTCAAAGTCTTGAAACAGAGTTGCTGAATTGTTCCAACGATAACGATATCCAAGCCGTATTGAGGAAGTTCAGTAAACAAGAcaactcagaattttcactcgCACCATACTTGCAAAAAATTGATAGTATCTTCTCAGCGCCAACGGTAGAGGAGATCTACTCTCGGTTAGAGAAAGATGATTCGAATTGGGCTGAAGAAACCATTAAGCTATTGAATAAAATGTCTCCGACCAGCCTAAAGATTGCACATAAACAGTTTGAACTTGGCAAAGAGTTGGATTTGGACAATTGTTTGAAAATGGAGTATAGGTTAGCTGTACATTGTGTCAACGGTCATGATTTTAAAGAAGATGGCACCAAAAAGAAATTATACGCCGGAGCAAATCGCTCAAGCGTCCAGAAGGGAATGCATGTGGCTACAGCTGCCAAACGAGCTGGTGTTCCTCGATTTCCTCGAATAACATTGATGTACAAAGTGTCGGGCAAATCCCCACGAGTATGTTCAATGGGACCAGCTGGCAGTCTTAGCCTAGCAGAAAAAGATATCCTTGTTCACTGA
- Protein Sequence
- MLMYSQDALRRALTQIQEHGMGIREPSRKFSVPKTTLQDRLKGKVPKNPMKTGPPPRLTVNGERISTHHIDSADLQSLETELLNCSNDNDIQAVLRKFSKQDNSEFSLAPYLQKIDSIFSAPTVEEIYSRLEKDDSNWAEETIKLLNKMSPTSLKIAHKQFELGKELDLDNCLKMEYRLAVHCVNGHDFKEDGTKKKLYAGANRSSVQKGMHVATAAKRAGVPRFPRITLMYKVSGKSPRVCSMGPAGSLSLAEKDILVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -