Basic Information

Insect: Orchestes rusci
Gene Symbol: clz9
Assembly: GCA_958502075.1
Location: OY293306.1:24113990-24115921[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8e-14 3.4e-11 44.3 0.1 3 41 17 55 15 59 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8e-14	3.4e-11	44.3	0.1	3	41	17	55	15	59	0.93

Sequence Information

Coding Sequence: ATGGTTAGAAACTATGTTCGGAAGACAACGCGTCAGGAATGGAGTATCGAATCAATGAATACAGCAGTTGATGCAGTTGTTAGTGGACAAATGGGATACAGGAGGGCCGCAGAGCAACACGGTGTTCCCCAAACAACTTTAGAAAGGTATGTTAGGAAGAAAACAAACGAACagcaaaattttgttgttgataaatCTGCCGGAAAATTTCACTGCGTTTTATCACAAGAACAAGAGTTAGAACTGGTGGACTATTTAAAATCTATGGAAGCAAGACTTTTTGGCTTGACCATGATTGACTTCCGACGTTTGGCTTATCAATTAGCTATACAGAATCAGTGCCACCATAAATTTAACGCAGCAGCTGAAATGGCTGGAAAGGATTGGATGCAAAGCTTTTTAAAACAACACCTTACTTTGACGCTACGAAAACCAGAATCGACATCGGGAGCTCGAGCAATGGGGTTTAATAGGGTTGCGGTGTCACAATTTTTCCGCCTTTGTTTGGAAACTATGGACAAATATAAGCTAGGTGGTGACCGCATCTATAACTGTGACGAAACGGGGTTGACTGTGAATCCAAAAGGCCATACCAAAATTTTAGCCCTAAAAGGAAAACGTCAGGTAGGCACCTTGACTTCTGCTGAACGAGGAGAAACTGTAACTGCTGAAATCTGTTTTTCTGCTGCTGGAGCATACATGCCACCTATGCTCATTTTCCCTAGAAAACGGAAGCAACAGACATTCGAGTCAGGCTTGCCACCTGGTTCAGTGGTAGAAGTTAGTGATTCTGGATGGATAACCAccgaactttttttaaattggtttAAGCTATTTGTCACATTTTCTAAAGCAACAAAAGAAAATCCGGTGATTCTTTTGTTAGATGGGCATTCAACCCATACCAAAAATCTTGACCTAATTTTGCAAGCACGTGAGAACGGTGTAATATTATTATGCTTTCCACCACACACCAGTCACAGACTCCAACCCCTAGACGTTTCCTTCATGAAACCGCTAAGTACATTTTATGAACATGAAGCTCGGACATGGCTGCGTTGCAACCCAGAAAAAGTCATAacgatatttcaaatttctacGCTTTTTGGTGCTGCCTTTTTAAACGCAGCAACTATGAAAACGGCGATAAACGGATTTCGCAAAACTGGAATTTTTCCCCCCAATGAAGATGTTTTTACCGAAGTTGATTTTTTACCGGCTGCTACCACGGACCTTGAAAACAACAACCCTCCATCAGCAAATGACACTTCTAGTGCACTGAATGAAGAGCCGAGACCCGAGACGCCAACGGAAGCTTCAATCTCAAATTCACCTCTTGCGTCTCCTgctgaaaaaaaatcggatGTAAGAAAATCAACTGAATCTTCTTCTGTATCAGCAAATGACATTTTAAATCCCTTACCAGGTTGCTCTTCATGGAAATCTCCAAAGAAATATGCTTCCTCCGATGTCAACAAGAAGACTGTTTTTCCCTGTTTGTCGCCAGAAGTTGCGTTACCCATTCCAAAAATCGAACAAACAGTTAAAAGAGTTAATCGCAAGAGAGGTAAAACAGCAATATTAACCTCAACTCCGTATAAGGAAGAACTAGAAGAAGCAGCTGCAAAAAAGTTTCCGAAAATGAAGAAAGACGGTGTTAAGAGAAAAATTGGCAGTGAAAGTCAAACAAGTAGCATTGCGAAGAAAAAGCGAAACCCTACCAAGAAACTGCCGATAAAAAAGGTAGATGCTGATTCATCTTCAGATGAAAATAGTGACGTAGATTGTCTCTACTGCAATGAATACTGGTCCAAGTCTGTTGAAGGGTGGATTGCCTGTTCAGCGTGTCACAAATGGGCACACAATGCATGTGCCGGCGTTGATAGTGAAGACGATGAATTTGTGCTTGTTTGTGAACACTGCCAATCCTAA
Protein Sequence: MVRNYVRKTTRQEWSIESMNTAVDAVVSGQMGYRRAAEQHGVPQTTLERYVRKKTNEQQNFVVDKSAGKFHCVLSQEQELELVDYLKSMEARLFGLTMIDFRRLAYQLAIQNQCHHKFNAAAEMAGKDWMQSFLKQHLTLTLRKPESTSGARAMGFNRVAVSQFFRLCLETMDKYKLGGDRIYNCDETGLTVNPKGHTKILALKGKRQVGTLTSAERGETVTAEICFSAAGAYMPPMLIFPRKRKQQTFESGLPPGSVVEVSDSGWITTELFLNWFKLFVTFSKATKENPVILLLDGHSTHTKNLDLILQARENGVILLCFPPHTSHRLQPLDVSFMKPLSTFYEHEARTWLRCNPEKVITIFQISTLFGAAFLNAATMKTAINGFRKTGIFPPNEDVFTEVDFLPAATTDLENNNPPSANDTSSALNEEPRPETPTEASISNSPLASPAEKKSDVRKSTESSSVSANDILNPLPGCSSWKSPKKYASSDVNKKTVFPCLSPEVALPIPKIEQTVKRVNRKRGKTAILTSTPYKEELEEAAAKKFPKMKKDGVKRKIGSESQTSSIAKKKRNPTKKLPIKKVDADSSSDENSDVDCLYCNEYWSKSVEGWIACSACHKWAHNACAGVDSEDDEFVLVCEHCQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01240051;
90% Identity: iTF_01240051;
80% Identity: -