Basic Information

Gene Symbol
Arid2
Assembly
GCA_958502075.1
Location
OY293314.1:27783-66829[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-23 1.6e-19 71.7 0.0 1 89 15 101 15 101 0.94
2 2 4.4 3.2e+04 -3.0 0.0 23 39 616 632 602 636 0.82

Sequence Information

Coding Sequence
ATGGCCGAACTGCTCGGCAAAGACGAGGCCACGTACGAGAAAGAGAGGCAGGCTTTTTTGAGGGATTTGAGACATTTCCACGAGACCAGAGGGACACCCTTCAAAAGAAACCCCACAATAGGAGGCCGAGAAATCGATCTCTTCCTGCTGTACTCCCTTGTAACTGCCCAAGGAGGATGGGTCAGAgtaaatgtcaaaaattcctGGAGCAGTATTCTGCCAAACTTCAAATTACCCGCCGTTTGTGTGAATGGATCAGTGGCGTTGAAGCAGTTGTATTTACGGTATTTGGACCGATGGGAAAAGGTGCATTTTTTGGGCGAGGACGGCGACAGAGGCAGCGATGATGACGAAGAAAGTCGTCACAAAAGATTGTCAGCCCGTGCTCTGCATGTTGTGCCTCATGCTTACCAGTATTCGCAGCACAATGTCACTGAAGAGAAGCGCGAACTACACAAACTGGACCCCAACCTGTACAAACCGTCAGACTATGACCGATTGGCCTTAAGTCTGTTGTCGCCGCTGCCCAACGAGCAGGATTTTGCCATAAATGTCTGCACTTTGTTGTCCAACGACAACCGGAATAATTTGAAGTTGGAGAAGCACCCCCGGCTCGCGACTTACTTATTGGCGCATGCCGGAGTTTTCAATCATGCCTCTTTGCGACAATTGTTCGTGCAAACCTACTCGGAAACACGCAAACGTCCGCTGCACTCATTCTGGCGCGACATTCTCGACTCGGACGAGTACTTGGACCTGGAAAATGAACTGAAGTTCCTGCCGAAAAAGGAATGTAAAACCAGCTGTGATAGTCTGTTGCTGCCCGATTCGCTGCAAAATCTGGGAATCGAGGTGATTGACGAGAAAACATCCAAAGAAGACGgagaaatattcaatttgaaacGCAATCTGGGCACGCAGGACTACATAGGTCAACGGGTGTTACAGGTGGCGACTATTTTGCGGAATTTGTGCTTTGTGGAGGACAATGTGGCGGTACTAACGAAGAACTGTGCGTTTTTGCGGTTTTTATTGTTGTGCGCGTGTTCACAGTGGAGCACTTTGAAGAACTTGGGCCTGGATATGTTGGGCAACGTGGCCGTAGAGCTGGAAATTGATTCCAACGAGCTGCTCGGCAGTTTCCTCctgaaaatcatcaataaaaacCTGCAAAGTGACGACCGCGCTTCTTGTCTGTCATCGGTTGAGGTTCTCAACAAACTCTCGCAAAACGATAAAAACGAAGACATCTTAATCCGTAGTCTAGAACACTCGGTGTATAAACGCGTCTGTTCCTTTCTGACGATACACGACGTGATGCTTCTCATCTACACGCTAGAGTGTCTCTACTCCCTCTCCTCTTTGGGGGAGCGCTCCTGCAACTTTATATCCAATATTCATGGGGTTATCGACACTCTCGTATCGCTAATTACCGTCGAGGGCAAAAGTTACGGACCCAAAGCCTGTATTGGGATGAAACTAGTAGAGACGATTCCGTCGGGTGTGCAGATTCAACAGCAGGCGACGGTGGCGGCTCCTGTGGTCACAGCGCCAAGTACCGGTGTGAGTGGGGGGGATACTTTGATAGGCTCGCCGCCGGCTCCCGCTGTAACGCCTGTCAAATTGGCGGTGGGAAGACCGCAGCCTCTCAAAGTTACTCCCAAAAGTGATACACCCACACCAATGAAACCCGTGTCCGCTCCAACGATCACGCCCACTGTGTTGACGTCCACGCCCCAAACCACCAGCCTCACACCACAACAGCTGATCCAGCAACAACATGCCCACCAACAGGCCATTCACGAAAACGAACAATTCGCGCTCGCATGGCTGCGTGCCACATACGAGCCGAGTGTGGGTGCCAGTCGGGTGGATCACCAAGAATTGTACAAACATTACATCAGTTCCTGTCAGAAAATTGGCCGAAAAGGCGTGATTTCGCCGCTCCACTTTCCACGTTGCGTCAGATCAGTGTTTGGTGGTACTGTTGGACCGAACCCGATGAAACCAGTCAATCCTAGTGATCCGCAGTTCTACGACGGAATCAAGGTGCGCGCTACACCCCTTAAACTCAATATCCCAACCCCAATCAGTGCGCCGCCCCCAACCCAGTCAACTAAACGCGCGATTAAAAAAGCAGCGGAAGTTGAAGGGGTGGGGGGCGGCATTTTGAAGGCTCAGTTGAGCGCCCCGCCCAAGCTCAAGGACACGCCCATTGATGGTAACCAACAGGCCATTGCGCATCCGCATCTAAGCAACGCCCTGTTGGGACAGACGGGGAAAGAGGTCACGCCCGCAAAGGGCGTGTCCAACGAGCAGTCGTCGTTGATTAAGAGTTTGTTGGCAACGAAGGTAACTGACGCATGTGTGGCGACTATGGCGTCATGCATGGCCAATGCCGCAACTACTACTACTACCACCACTAGTGCCAGTACAGGCGATAATGTAGGACAGGTGGCGGCTCGTCAACAACGCCTGCTCTTGAAGGCGCCCGAATCGACGCCTAAAAACCAGAGCCGTCTCGACGCCCTCAAAATGCACCGCATCAACGGCGTCCGTCAACTTTTCACCGACACGGAAATCAACGATCCCAGCGTCTCGTCAACCACCCAATTCGTCAGCACGATAAAAGGCAAGAAAGAACCGCCCCAACCTCCGCCCCCACCATTGGCGCCCCTTAGCAACAACATTAAAGAAGAGGACGTGGGCGGAGTGAGTTCAACAGAAGAGGCGGGCGTGACGAGCTTCGAGGGGCTGTTGAATGGCATTCCTGTTGAAGAGGGCGTGTTAACCACGGCAATTACGCAGGATAAGCCGCTGCGATTGGCCGATTTGTTGGATAAAAGCCCGCCCCTTAACGGGGCCATCAAGGAGGAGCCTATCGATAAGAGCGACATTGTTGATAACCACATCCAGAAGGCATTAAATGCTCAAAACGAAATTAAAATCGAGTTTGACGAGGATGAGATCAAAACcgaaataatacagggtgttaagcGAGATAACTCAGACGAGATAACTGACCAGGTTGAAGCGAAAAAAAAGTGCAACGGCTTGGAAACCAGCTCGTCGTCTGTGTCCAACGCGGCTGCCAAACTTTTTGCTGACTTTGCTGCTGATATTCTGGAAGATGAGGAGGAGCTGAGTCAGCCACCGGCCACGTCCTTGCCGGCTGTAGTATTCGGGGGTGTTAAAGGGGGCGTAATCGTGCAAAACTCTCAGCAAAGACAGGttttaattcaaaatcaaaGCCTGGTACTCGGCCAGGGAATGCAGCTGGTCAGCGGCCAAGGTGGTCAGTATGTGATACAAGCGGGCACGGGGGGGCAGGGCTACATGGTGGCCCAACCTCAAAACACCATGGGCTCGCCCCAGACGGTGTTGCTGCCGCAAGGTGCCACCTCCAAGACGATTATTATACTGCAGCAACCGTCGGCGACACCGCAAAAGGTTGTAGTCACCCCGCAAGGCCAGCAGGTGGTGGTGACGCAAGTGACCCGACCTCACCGGCCCACCCCCACGCCTAGTCCGGGAAGTTGCAACGGCGTGAAGAAGGAGGAAAAGGAGGAGGTAGTGAGGATTGCCAGAGATCTGACCACGCCTTTTGTGTGCGAGTGGGGGGAGTGTAATATAACGAAGTTTAAGTCAGCCAATCAGGTGTTTATGCACGCGTGCGAAGCGCATGCGCCCACTGGGACCGAGGAAGTATTGTGTCAATGGGATCggtgtgataacttgaagaggTCGAGGTTCAGTCTCATGACGCATTTGCAAGATAAACACTGTAACTTGGAGGCAATGAAGCATAGTTTAGTTCGTCGAAAAAAGATCTCGCAAGGCATCAACGTAGATCCGCCCCCTGCCACGCCCACTAGTCATCCGGGCTACGCTCCAGATGCCGCGCTGCACGCCATCAAGCGACACGCCCTCGACTTTGTCAATCCCAAAGAGCTGCAGATGAAAACTCCCATAAAAGGCGGTACTACAACTATAAAAGTGCCCCACCCACCGTCCGATCAGGATGACAATGAAGGTCCGGTGACGAAAAGCATAAGGCTGACTGCCTCCCTGATCCTCAGGAATTTGGTCATTTACAGCAGTAATTGTAAAAGGTACTTAAAATCGTACGAATCGCATCTCGCCAACGTGGCATTCAGCAACGTGGAATCTTCGCGAACTGTGGCCCAAATCCTGTATGACATGAACGACAGTCCGGCCCTGAACAACAGGTGA
Protein Sequence
MAELLGKDEATYEKERQAFLRDLRHFHETRGTPFKRNPTIGGREIDLFLLYSLVTAQGGWVRVNVKNSWSSILPNFKLPAVCVNGSVALKQLYLRYLDRWEKVHFLGEDGDRGSDDDEESRHKRLSARALHVVPHAYQYSQHNVTEEKRELHKLDPNLYKPSDYDRLALSLLSPLPNEQDFAINVCTLLSNDNRNNLKLEKHPRLATYLLAHAGVFNHASLRQLFVQTYSETRKRPLHSFWRDILDSDEYLDLENELKFLPKKECKTSCDSLLLPDSLQNLGIEVIDEKTSKEDGEIFNLKRNLGTQDYIGQRVLQVATILRNLCFVEDNVAVLTKNCAFLRFLLLCACSQWSTLKNLGLDMLGNVAVELEIDSNELLGSFLLKIINKNLQSDDRASCLSSVEVLNKLSQNDKNEDILIRSLEHSVYKRVCSFLTIHDVMLLIYTLECLYSLSSLGERSCNFISNIHGVIDTLVSLITVEGKSYGPKACIGMKLVETIPSGVQIQQQATVAAPVVTAPSTGVSGGDTLIGSPPAPAVTPVKLAVGRPQPLKVTPKSDTPTPMKPVSAPTITPTVLTSTPQTTSLTPQQLIQQQHAHQQAIHENEQFALAWLRATYEPSVGASRVDHQELYKHYISSCQKIGRKGVISPLHFPRCVRSVFGGTVGPNPMKPVNPSDPQFYDGIKVRATPLKLNIPTPISAPPPTQSTKRAIKKAAEVEGVGGGILKAQLSAPPKLKDTPIDGNQQAIAHPHLSNALLGQTGKEVTPAKGVSNEQSSLIKSLLATKVTDACVATMASCMANAATTTTTTTSASTGDNVGQVAARQQRLLLKAPESTPKNQSRLDALKMHRINGVRQLFTDTEINDPSVSSTTQFVSTIKGKKEPPQPPPPPLAPLSNNIKEEDVGGVSSTEEAGVTSFEGLLNGIPVEEGVLTTAITQDKPLRLADLLDKSPPLNGAIKEEPIDKSDIVDNHIQKALNAQNEIKIEFDEDEIKTEIIQGVKRDNSDEITDQVEAKKKCNGLETSSSSVSNAAAKLFADFAADILEDEEELSQPPATSLPAVVFGGVKGGVIVQNSQQRQVLIQNQSLVLGQGMQLVSGQGGQYVIQAGTGGQGYMVAQPQNTMGSPQTVLLPQGATSKTIIILQQPSATPQKVVVTPQGQQVVVTQVTRPHRPTPTPSPGSCNGVKKEEKEEVVRIARDLTTPFVCEWGECNITKFKSANQVFMHACEAHAPTGTEEVLCQWDRCDNLKRSRFSLMTHLQDKHCNLEAMKHSLVRRKKISQGINVDPPPATPTSHPGYAPDAALHAIKRHALDFVNPKELQMKTPIKGGTTTIKVPHPPSDQDDNEGPVTKSIRLTASLILRNLVIYSSNCKRYLKSYESHLANVAFSNVESSRTVAQILYDMNDSPALNNR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-