Ocom015518.1
Basic Information
- Insect
- Ophraella communa
- Gene Symbol
- GATA1_1
- Assembly
- GCA_035357415.1
- Location
- CM068979.1:72342840-72347620[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.88 1.8e+04 -2.2 0.5 7 19 232 244 231 245 0.77 2 2 4.4e-18 8.8e-14 53.2 1.8 1 35 294 327 294 328 0.97
Sequence Information
- Coding Sequence
- ATGGATTTGAAAGAAGAACAGCAGCCTTCTTCTCCGAAAGTGGAATTGAAAGAGGAGATAAATGAAACTACGGAATGTCCACCACCTCTCACAGCCGCATCAGGTCAGGGAGTAATACGAAGAAATTTCATTACGCCCGCGGGAACAATAGTAGAAACAAATGAAGAACAACCACCGGAACCCACTACTGAAGAAGTAGTGAAAGCGGCTGGTCCAACATCACACGAACAAAGCCCAGTTGATCAAAGTTCCGAAGCTACAGATCCACCGAAAGAATACAGAGAACTGCATCCGCAAGAACAGAGAGAACAATTTCCAGTAACTACCGTGGAAATGCagccggaaaatttttcgaatcAAAATTTTTCGCAAGAATTAGAATATGCAACTGTCCATATAGACGGAAATGTGGTTCCGATAACTCTAACGCCCAATATGGAACATTCGGGCGATTACGCTAACCTGCAAACGGCTCAATATAATAACGGATATACGGATGCTTCTCAATATTTGACGCAACAGCAATATAATAGTTTATACGTAGATCGAAGTAGCGTTGGAAGTTCCTCTCCAAATGCGGTGGTCTACAGAGACGATCCAATTTTAGCTGCTTCCCGATATCAAaCTAATTATGACGTATCTAGCAGCCAGCCGCAGATAAATTTAATAACAGCTCCCGGAGAAACTTACTACACTACAACGACGAATTGGCCTTCATCCAGCAGTGGAACCTACCCCCAACAATACACCAGCAACGTGAACGCGCTTCCTCAAGCTGATAGCACACAGTCTTATGAAAATGCCTTCGTGAATGCATCTTGGACATCTAGTCCAGTAGAAGACGGACGTCCACCTGGTCAAGAGGTACTAGTGAAAGAATGCGTTAATTGCGGTGCTAGTGTTACACCACTTTGGCGTAGGGACGGTACCGGTCATTATCTGTGTAACGCGTGTGGTTTGTACCACAAAATTAATGGGGTGCATAGACCTCCGATTAGACCCACCAAAAAACCACAGGCGGTAAGTTCTAACTTTTCAAATTCCATTATCCATTTGTAA
- Protein Sequence
- MDLKEEQQPSSPKVELKEEINETTECPPPLTAASGQGVIRRNFITPAGTIVETNEEQPPEPTTEEVVKAAGPTSHEQSPVDQSSEATDPPKEYRELHPQEQREQFPVTTVEMQPENFSNQNFSQELEYATVHIDGNVVPITLTPNMEHSGDYANLQTAQYNNGYTDASQYLTQQQYNSLYVDRSSVGSSSPNAVVYRDDPILAASRYQTNYDVSSSQPQINLITAPGETYYTTTTNWPSSSSGTYPQQYTSNVNALPQADSTQSYENAFVNASWTSSPVEDGRPPGQEVLVKECVNCGASVTPLWRRDGTGHYLCNACGLYHKINGVHRPPIRPTKKPQAVSSNFSNSIIHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -