Basic Information

Gene Symbol
ZBTB41_1
Assembly
GCA_035357415.1
Location
CM068980.1:57002140-57014193[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 1.7 6.1e+02 3.6 0.4 2 20 5 23 4 25 0.92
2 23 0.32 1.2e+02 5.8 0.3 2 23 89 111 88 111 0.92
3 23 2 7.2e+02 3.4 0.3 3 23 870 891 868 891 0.92
4 23 0.0074 2.7 11.0 2.7 2 23 951 973 950 973 0.97
5 23 0.00017 0.063 16.1 1.0 1 23 1006 1028 1006 1028 0.98
6 23 0.00017 0.063 16.1 1.7 3 23 1035 1056 1033 1056 0.95
7 23 0.0038 1.4 11.9 0.7 3 23 1064 1085 1063 1085 0.95
8 23 0.016 5.7 10.0 0.5 1 23 1091 1114 1091 1114 0.96
9 23 0.027 9.8 9.2 1.3 1 21 1119 1139 1119 1141 0.85
10 23 0.00021 0.077 15.8 1.9 1 23 1150 1172 1150 1172 0.98
11 23 3.8e-07 0.00014 24.5 0.4 1 23 1179 1201 1179 1201 0.98
12 23 4.8e-08 1.8e-05 27.3 0.4 1 23 1207 1229 1207 1229 0.98
13 23 3.6e-05 0.013 18.3 0.0 1 21 1235 1255 1235 1256 0.96
14 23 3.5e-06 0.0013 21.4 1.2 1 23 1277 1299 1277 1299 0.98
15 23 0.00022 0.081 15.8 3.3 1 23 1304 1327 1304 1327 0.94
16 23 1.2 4.4e+02 4.0 3.8 2 23 1334 1356 1331 1356 0.86
17 23 0.00015 0.054 16.3 0.4 1 23 1362 1385 1362 1385 0.93
18 23 0.00019 0.069 16.0 8.8 1 23 1390 1412 1390 1412 0.99
19 23 0.22 81 6.3 1.0 1 23 1421 1442 1421 1442 0.97
20 23 1.2e-05 0.0044 19.8 0.9 2 23 1451 1472 1450 1472 0.97
21 23 3.1e-06 0.0011 21.6 3.5 1 23 1478 1500 1478 1500 0.99
22 23 2.1e-06 0.00076 22.2 0.7 1 23 1506 1528 1506 1528 0.98
23 23 0.029 11 9.1 7.2 1 20 1534 1553 1534 1555 0.92

Sequence Information

Coding Sequence
ATGCCCGGTAAGAAATGCGAACATTGTCGTTTAGAATTCCAAACCGAGGACATACTCCAACAGCACATAGAAAACTTGGGAGCATTTTTAAAAGCTTATTGCAAAGGATGCAAACACTTCATAAGATTGGAAGAATCCAAATACCACTTGGACACTACGTATTCTTGTTCGGTGTGCAAAAGAATATTAAAGGAAAACTTGTGTTTATCCCATAAATGTTTCCACGATGATAAAACGCAAAAGTCCTCTGAAAATTTAAGGATGCCGTGTTACGTTTGTCAAGAAGTTTGTTTCTCGGAAAAAGATTTAGTAGCCCATATCACCGAAACACACTCGACGTTACATACGACAATTTGCAAATGTTGCTCGAGGAATTTCCAAGGAGAAGAATTATGTCAAGACCATTTCCGAACGGTTCATAAAATGCGCTTGCCGTCAATGTATACGAACCCCATAAAATATCTATGGAACAAACAAAAATCAAATGCTACTTTGAAATACAGGATTATCTGTAAATACTGTTTGTgctatgggtgtttcaagagcAACAGCGATCCTCATGCAGATtgtcaaaaGGTTGTGTCCTGTAATACACCACGATTAGGACGTCACAAACGGAACCGGGTTTTGTCCCAGAAATTTCTAGATTTCATTAATTCGTCAAAACAAGGTAAATTTGATTTGCCAAGACCATTGAGAGATTATTCATACCAAAGAAAGGTGAAACCAAATAGACTTGGTAGACCGCCCTGTCTGAGTCGCAAACAAGAACAGGCTTTGGCTGACAGAATAATGAGACTAGGTGAAGTAGGTTTACCATTAACCGATAAACTGATTCGAAATGAAGCATGTCTGTTCTACaagacaattaatattaaaaacgtGTTCGATACAAAGAGAAAAAGTTCAATAGGAAATAAATGGATGAGAAGATTTTTGGATCGAAatcatgaaataaaaatttataaaggtCCATTTGATAATAAAATGTCAAGGAAATGTTTTATGGAGATCGTTCAGAATCACTTTAAAgctgtgaaaaatatttttaccaaGTTAGATATATTAAATCATCCAGAGCGTCTTTATAGTATGGATAGGAAGCAATGTTTATTAAACCGGAAATTTTTAGGAGAAAACGGTAAAATtcgttttacaataaataatatattggaaACCGTTATCACGATAATATTTGCAAATGCCTCCGGCAATAAAGTACCTCCAATGATTTCTTTTGAATGGAAAAAATTGCTTCCGCAATGTAGTGACAATAAGAATATTATCCCCAAAGGAAATTTAACCACTGAATTTCTCTTGGATGTAATAGAACATCTTGGCCAATACAAATCCCCTGGAAAATGTCTATTAATTTTCGATGCTGGTTTTTCTATTTTGGATGGCAGGATTTTAGATGCAGCTGATAAGCACGACATAGTGTTGTACAGCTTACCTCCTAATACAGAACATGTTCTACAACCGCTCGAAAGATATGTTAATAAGTCTTACCATTATCATTTTAATGAGGAACTTTCAATCTATGAATCTAAATATCCACATCGTAAAATGGGAAAAAAAATCTTTCTCAAGATTTTTGCCAAAGTATGGCTCAGCTGTATGACTGAAACAAACATAATAACCGGATTTAGAGATACTGCTTTGTATCCGTGCGATTTGTCGCTAGAAGATCAGTTGtccataaaaaatgtaaaaagaaaaaccaagaaGCTAGATGGACAGAAATCTGATGTTCCAGTCCAGTTGGAAAGTGAATCTGATGTTCCAGTCCAGTTGGAAAGTGAATCTGATGTTCCAGTCCAGTTGGAAAGTGAATCTGATGTTCCAGTCCAGTTGGAAAGTGAATCTGATGTTCCAGTCCAGTTGGAAAGTGAATCTGAACCAGCTAAACCCgatagtttaatagatttacaAATCTGTTCATCAGAAGAAGAAAACAGGAATCCGCAGTctcaaaattcaacaaacagGGCACTAAAACGTAAAAATTCGAGCATGAACACTTCTGATTGTAACAGTAACAAACTGAAATCTCCATCAACAAGTAATTTACTAgagaatcaaattttaaatattgagaaTCCTTCTGACGACTATGAAAGTTATTTTGACGCAGATTTTCCCGCGAATTTGTTTGATCTACAAATCTGTGTATCAGAGGAAGAAGATGATGAAAAAGTAGAAGATGAAAATACACAGTCTAAGCAAAAAGTTTTGATAGACTTTAAAAGCAAATTAACTAACATCCCGAATACACAAGCAACTTTAAGTGTGTTAAAGCATAATGTTTTTGAGCTCTCTGAGAAAgttgaaaaatcaaattttacttTAACAAAAACTCCATCAAAGCAAAAAATTAGTTTTGAGCTAAAGATTGTTGAGGACTCTGATACCGTTAGAAATAGAATGAGGTTTTGTCTAGTTTGTGAAACGGAAAGTGCTGAAGGTATGCGCAAATGCAAAATTTGTTTGGGTTGGTACCATGAGGATTGCGGCACTTGGCTAATACACGATGCATTTTTACCCACAGCTCATCAATGTTTTCACGAAGATCAAGCCCAAAATTTTGCTCACGACGCCAAAGTGCATTGTGCGATCTGTAACGCTGTATTTTTCTCCACAATAGACGTTGACAGCCATATGAAGGATAAACACTTTACAGAACAGTGTAATGATTGTAAATGCTGCAAAATGTTTCATGAAAACGAACAAGATTTGAAAGAGCATATTAGAGAGAAACACAACCGCATTGTGCCTTCAGAAATATCCGAAAGAAAAAGAAGACCGCATGTCATCAAGAGGAAACCAAAAAGTACAGATTCCACTCAAAAGAAATGCAGCCAATGCTCCTTAAAGTTTAATACGAAGAAAGAGTATCTGGCGCACAAGAGACGGGCCCAcgaaatttttttgtgttacaTATGCGGCATGAAAATGCACATAAATTTTCTGAGGACTCATTTGGATATGCACGAGAACAACAAGAGATTGAAACGTTTCCAGTGTTTGAAATGCGGTAGGATATTATCTAGTGCCAAGACTTTAAAGAACCACAAAAGAATCCACTtggagaaaaaaattaattgcgACGAATgcgggaaaaaatttaaatttaaaagcacTATGTTGAAACACAAGCAATCGGTTCACTTGGCCGATTACACCAACGCGTGCGATCTGTGTGATTCAGCTTTCAAAACACCCTTAACGCTAAAACAACACATGCAACACGTTCATCTTAAACATTATAATTATGCTTGCGAGATATGCGGGCGAGGTTACTTTCTAAAAAAGATGTTGGATCATCACGTTAAAGTCGAACACGAATACGTTCGATTCTATTGCAAATTGTGTGACAAACCTTTTAAGACATTACAAGGGCTGAACTTCCACAAAGAGGGTCACGATCCAAACCATACCAGAAAAACCTTCAATTGTAAAATTTGCTTCGGCGTTTTTACATCTAGGTCAAGCTATGTGTCTCACATGAGGAAACATAAGGTGGGAGAGGAAAACTACATTTGTGATATATGTGGAAAGTCGGTAAAGAAAAAGTCTAGCCTTAATAACCACATAAGAATCCATACTGGAGAACGCCCATTCGTTTGTAATGATTGCGGAAAGGCGTTCAGTACCAACAATCTATTAAGGACCCACATCAGGATCCACACCGACGAAAAACCTTATGTATGTCCCATCTGTACAAAAGGATTCAGACAGCGACCCGCGTTGAAGATACATCTCAGgtTAGAAGATGGTAATCTAATAGACTACTCAGCTGTGTTGCATTGCCAAGCAGATTATCCAGGTTTTACATGCGAGATTTGCCAGAAACAATTTGCAACCATATCAAATCTGAGGAGACACAGATTATCCCACCAAGAGAAAACGTTTGTATGTGATATGTGTCCTAAAGTATTCCACCAAAAGTACAATCTTGAATACCATAGGAATTTCAAGCATTTCCGGAAATTTACGTGTAAATGCTACTACTGCGATCAAGTGTGCTTGAATAAGAATGGTCTAAAGCTACACATCGACAATGTACActtgaataaatacaaattccCTTGCGATAGATGTCCCAAGGGTTACAATTCGAAAAGTGAGTTGGAGAAACACGTACAGTTTGACCACGAAGGGGTGCGATACAAATGTTGGCTCTGCCATAAAACGTTCAAAGACAATAACCACTTCAAGCAGCACACCAAAACACATGATCCGAATTATACTAAACCCGAGTTTACTTGCTTGATTTGCAACAAGATTTTGTCGATTAAATCTTACGACAGACACATGAAGATGCACCAGGGCAATGTAGGCAACAACGTCGTGTGTGATATTTGTGGTGTTATGCTGTCGAGCAAAAGTCACTTAAACAATCACAGGCGTACTCATACCGGGGAAAAACCTTACAAGTGTGATTTTTGCGATAAATGTTTTGCGCGAAGCGAAACCTTGACAGATCATAGAAGAGTTCATACGAAAGAAAGGCCTTACGTATGCACGACTTGCTTTAAGGGTTTTACTCAAAAATCCGCTCTAAATGTACACCTTAGAATACACACAGGCGAAAAACCGCATTTTTGCGCTATATGCCAAAAGAAATTCACAACGAAACATCTTTTAAAAAACCACAAGTGTTTCGGACCCCTCGTTGACGAAGAAGTAAATGACGACAAGACTAAAATTGTCTTAACAACAGTCCCTAGTTTACCAtag
Protein Sequence
MPGKKCEHCRLEFQTEDILQQHIENLGAFLKAYCKGCKHFIRLEESKYHLDTTYSCSVCKRILKENLCLSHKCFHDDKTQKSSENLRMPCYVCQEVCFSEKDLVAHITETHSTLHTTICKCCSRNFQGEELCQDHFRTVHKMRLPSMYTNPIKYLWNKQKSNATLKYRIICKYCLCYGCFKSNSDPHADCQKVVSCNTPRLGRHKRNRVLSQKFLDFINSSKQGKFDLPRPLRDYSYQRKVKPNRLGRPPCLSRKQEQALADRIMRLGEVGLPLTDKLIRNEACLFYKTINIKNVFDTKRKSSIGNKWMRRFLDRNHEIKIYKGPFDNKMSRKCFMEIVQNHFKAVKNIFTKLDILNHPERLYSMDRKQCLLNRKFLGENGKIRFTINNILETVITIIFANASGNKVPPMISFEWKKLLPQCSDNKNIIPKGNLTTEFLLDVIEHLGQYKSPGKCLLIFDAGFSILDGRILDAADKHDIVLYSLPPNTEHVLQPLERYVNKSYHYHFNEELSIYESKYPHRKMGKKIFLKIFAKVWLSCMTETNIITGFRDTALYPCDLSLEDQLSIKNVKRKTKKLDGQKSDVPVQLESESDVPVQLESESDVPVQLESESDVPVQLESESDVPVQLESESEPAKPDSLIDLQICSSEEENRNPQSQNSTNRALKRKNSSMNTSDCNSNKLKSPSTSNLLENQILNIENPSDDYESYFDADFPANLFDLQICVSEEEDDEKVEDENTQSKQKVLIDFKSKLTNIPNTQATLSVLKHNVFELSEKVEKSNFTLTKTPSKQKISFELKIVEDSDTVRNRMRFCLVCETESAEGMRKCKICLGWYHEDCGTWLIHDAFLPTAHQCFHEDQAQNFAHDAKVHCAICNAVFFSTIDVDSHMKDKHFTEQCNDCKCCKMFHENEQDLKEHIREKHNRIVPSEISERKRRPHVIKRKPKSTDSTQKKCSQCSLKFNTKKEYLAHKRRAHEIFLCYICGMKMHINFLRTHLDMHENNKRLKRFQCLKCGRILSSAKTLKNHKRIHLEKKINCDECGKKFKFKSTMLKHKQSVHLADYTNACDLCDSAFKTPLTLKQHMQHVHLKHYNYACEICGRGYFLKKMLDHHVKVEHEYVRFYCKLCDKPFKTLQGLNFHKEGHDPNHTRKTFNCKICFGVFTSRSSYVSHMRKHKVGEENYICDICGKSVKKKSSLNNHIRIHTGERPFVCNDCGKAFSTNNLLRTHIRIHTDEKPYVCPICTKGFRQRPALKIHLRLEDGNLIDYSAVLHCQADYPGFTCEICQKQFATISNLRRHRLSHQEKTFVCDMCPKVFHQKYNLEYHRNFKHFRKFTCKCYYCDQVCLNKNGLKLHIDNVHLNKYKFPCDRCPKGYNSKSELEKHVQFDHEGVRYKCWLCHKTFKDNNHFKQHTKTHDPNYTKPEFTCLICNKILSIKSYDRHMKMHQGNVGNNVVCDICGVMLSSKSHLNNHRRTHTGEKPYKCDFCDKCFARSETLTDHRRVHTKERPYVCTTCFKGFTQKSALNVHLRIHTGEKPHFCAICQKKFTTKHLLKNHKCFGPLVDEEVNDDKTKIVLTTVPSLP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-