Basic Information

Insect: Ophraella communa
Gene Symbol: -
Assembly: GCA_035357415.1
Location: CM068986.1:35284016-35297305[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 1.3e-16 1.9e-13 52.6 1.0 1 44 6 49 6 49 0.99

2 11 1e-05 0.015 17.7 0.1 3 26 62 85 61 95 0.91

3 11 2.4e-10 3.5e-07 32.5 0.9 1 44 126 169 126 169 0.97

4 11 3.6e-10 5.3e-07 32.0 3.5 1 44 291 334 291 334 0.97

5 11 2.2e-14 3.2e-11 45.4 0.5 1 44 413 456 413 456 0.98

6 11 1.9 2.7e+03 0.9 0.0 16 26 587 597 580 601 0.86

7 11 0.32 4.7e+02 3.3 0.3 17 29 628 640 620 649 0.77

8 11 1.7 2.4e+03 1.0 3.7 12 29 653 670 641 693 0.74

9 11 0.016 24 7.4 1.6 15 40 707 729 691 736 0.77

10 11 0.3 4.3e+02 3.4 4.1 16 41 736 758 730 759 0.86

11 11 0.34 5e+02 3.2 1.0 19 40 767 785 765 787 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	1.3e-16	1.9e-13	52.6	1.0	1	44	6	49	6	49	0.99
2	11	1e-05	0.015	17.7	0.1	3	26	62	85	61	95	0.91
3	11	2.4e-10	3.5e-07	32.5	0.9	1	44	126	169	126	169	0.97
4	11	3.6e-10	5.3e-07	32.0	3.5	1	44	291	334	291	334	0.97
5	11	2.2e-14	3.2e-11	45.4	0.5	1	44	413	456	413	456	0.98
6	11	1.9	2.7e+03	0.9	0.0	16	26	587	597	580	601	0.86
7	11	0.32	4.7e+02	3.3	0.3	17	29	628	640	620	649	0.77
8	11	1.7	2.4e+03	1.0	3.7	12	29	653	670	641	693	0.74
9	11	0.016	24	7.4	1.6	15	40	707	729	691	736	0.77
10	11	0.3	4.3e+02	3.4	4.1	16	41	736	758	730	759	0.86
11	11	0.34	5e+02	3.2	1.0	19	40	767	785	765	787	0.79

Sequence Information

Coding Sequence: ATGTCCACTAAAACATCGCCTGTTTGGAATTTTTTTACCGAATCAAGCGAATTCAAAGGAAAAGCCACTTGCAATATTTGCAAATGGCAGTTGTCTTTTAGAACGACAACTACAAATTTAATGAGACATATTCGGAGAAAACATCCAGAAGTTAATGTTGAAAATTCTAAGAAAATACCAAGAATGTGGCTGTATTTCACAAAATCACAATCAGATGACTCTTTAGCTGCTtgcaatatttGTaacaaacaattatttataactgAAGCTTCTTTTAAAGGATTtgaagaaaacaaaattaaaagtgaGGAATATGTCAGTGAAAATATATTTGTTGAAGAACTCAATATTGGTACTGATATGCATAATAGCAGATCTCAAATTTGGAATGTATTTACCATAAAATCAGCATCAGATTGTATAGCTACTTGCAACATTTGTGATCAACAGTTTTCCTTTAAGAGCACAACAAATGACCTTAAAAGACATTTTCAGAGAAAACATCCAGATTTATTAATGgaaagtaaaatagaaaaaattaaagaTCTTTCAGAAGAACAAGAGCCTGTTTATCAAGAACCCAATAATGAATTTGAACAAAAAAAAGATGCAGAAATGGAAGGAAAGGAAGTTGAACAGCAATATGAACTTCAAGCAGATCCATTATTATTAGAAGATACTAAAGTGTTTCAAAATCTTGACACTGCTACAAGCGATCAGAATCAACAAGTAGTTGGTAACATTGATGACTGGGACAATGATTTCTGGAACTTGAATCATTCTGATGGTGATGATGACCCTGATTTCCGACCCTCACCGACGTTCGATGAAGTagccaatattaaaaatacttctATCACTAAAAAACGATCCCAAATTTGGAATGTTTTCACGAGAAAACCAAATTCCGATTGCGTGGCCATCTGCAACGTTTGCAATCAAGAGTTCAGCCACAGGAGTACAACTAATAATCTTAAGAAACATTTCAAAAGGAAACATCCCGACAATACTTTCAATATCAAAATAGAACGAGTCAAAGAGAGCATTACTACTCCATTTGACATGATGAGGCCTTCTCCAGTGACAAGTCCTCTTCAACCATTGTTTAGGGGTAGAGACCATACAATTACCATAAATTCAAACATTCAAACGGATTCGACATCAGGTATCCACAAAACCGATGCAGAGGACGACGACGAAAGAGATTCTTCGGATGGCAATACCAAGAGGAAACGTTCAcaaatttggaaatattttacgCGAAAAAAACCAGGGGAGTATGTGGCTATTTGCAATATCTGCAAAAAAGAACTTGGGTTTAGGTCAACGACATCgaatttgaaaaaacatttgGATAGGAAACATCCTAATGTCAAGATGAAAAACGAAAATAACGATGAAGAAAAGAAGACTGCTCCTGAAGTTCGTGTAAAGACATGCTTAGTTTGTTTACAAAACGATCAAACAGAGTCTAGAGAATTTTTACAAATCAATAATGCAAAttccaaagaagaaaaaagttacATGATAAAAATCCAGGAGGTTATGAATCAGTCTGTGgttataaacGAATCGCACGTAATTTGTCTGCCTTGTGTTGACGATTTAGAAAAAGTAATACAGTTTAGAGAAAAAGTGTTTAAAGCCTTTGAGTTTTGGAGTAAAGTCGAACCAGAACCTGAAATGGAAACGTATGATAATGATGCGGATGATAACCATTCAGATTGCAGTGATTTAGAGGATGGTGAAAGTTTGGACAAATTTACCTGCAGCAAGTGCAATAAGGTATTTCCTTCTCCGTCTATCATGCTTAAACATAACTGTGGGCAACAATCCAGGAAAGAAAGACCTTGCATGAAGAAAGATTCTACTCAAGAAACTTTTTATTGCGAATTCTGTGGAAAATCCTTTAATATCAAATGGAAActcaataaacatttaaaaatatGCCAGTCGAACTCCAGTAAACAATTCAGCTGCAATTTGTGCAATAGGATATTTAAAAAGGCCTACCATCTTCGAGAGCATATGGCATCACATACTGGTGAACGGAGATATTCTTCAAAACAGAAACATATGCGCAGTCACAACGCCAAACCTGgagaaaaatcaaagaaaacgCCGTTTTTGTGTACGATATGTGGTAAAAGTTTTCATTACAGCAACGGAGCTTCGAGGCACATGAGGGTGCATCTGGGAGAAAGAAGGTATCAATGTCATATCTGTTTAAAGAAATTCAGTCAATCTACGCATTTGAAGgtGCATCTTCGTACTCATTCGGGAGAACGACCGTATGGTTGTATGATTTGCGGAAGGACCTTCTCTTTGAACGCTAGTCTTCGAAAACATATGAGGCTTCACGTTGGCTCCGGGGATTTTGTGAAGTTAGGGAAAAATCTCGAAACTGGGTTTCCTCATACCGATATGGTCACCGAAGATGGCTTACAAATTTTAACAGCTGTCTCACACGCTCCGCAAGAGATAGACGTGGATGGAAACCCCTGCATTGGTTAA
Protein Sequence: MSTKTSPVWNFFTESSEFKGKATCNICKWQLSFRTTTTNLMRHIRRKHPEVNVENSKKIPRMWLYFTKSQSDDSLAACNICNKQLFITEASFKGFEENKIKSEEYVSENIFVEELNIGTDMHNSRSQIWNVFTIKSASDCIATCNICDQQFSFKSTTNDLKRHFQRKHPDLLMESKIEKIKDLSEEQEPVYQEPNNEFEQKKDAEMEGKEVEQQYELQADPLLLEDTKVFQNLDTATSDQNQQVVGNIDDWDNDFWNLNHSDGDDDPDFRPSPTFDEVANIKNTSITKKRSQIWNVFTRKPNSDCVAICNVCNQEFSHRSTTNNLKKHFKRKHPDNTFNIKIERVKESITTPFDMMRPSPVTSPLQPLFRGRDHTITINSNIQTDSTSGIHKTDAEDDDERDSSDGNTKRKRSQIWKYFTRKKPGEYVAICNICKKELGFRSTTSNLKKHLDRKHPNVKMKNENNDEEKKTAPEVRVKTCLVCLQNDQTESREFLQINNANSKEEKSYMIKIQEVMNQSVVINESHVICLPCVDDLEKVIQFREKVFKAFEFWSKVEPEPEMETYDNDADDNHSDCSDLEDGESLDKFTCSKCNKVFPSPSIMLKHNCGQQSRKERPCMKKDSTQETFYCEFCGKSFNIKWKLNKHLKICQSNSSKQFSCNLCNRIFKKAYHLREHMASHTGERRYSSKQKHMRSHNAKPGEKSKKTPFLCTICGKSFHYSNGASRHMRVHLGERRYQCHICLKKFSQSTHLKVHLRTHSGERPYGCMICGRTFSLNASLRKHMRLHVGSGDFVKLGKNLETGFPHTDMVTEDGLQILTAVSHAPQEIDVDGNPCIG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01106734;
90% Identity: iTF_01106734;
80% Identity: iTF_01106734;