Basic Information

Insect: Ophraella communa
Gene Symbol: -
Assembly: GCA_035357415.1
Location: CM068986.1:35252515-35266548[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2e-15 2.9e-12 48.8 0.8 1 44 6 49 6 49 0.99

2 10 1.9e-15 2.8e-12 48.9 0.8 1 44 109 152 109 152 0.97

3 10 0.065 94 5.5 1.9 17 40 179 199 177 205 0.85

4 10 3.7e-12 5.3e-09 38.3 1.0 1 44 248 291 248 291 0.97

5 10 6.6e-10 9.6e-07 31.1 1.1 1 44 344 387 344 387 0.97

6 10 1.7e-10 2.5e-07 33.0 5.4 1 43 458 500 458 501 0.97

7 10 7.8e-14 1.1e-10 43.7 6.5 1 44 563 606 563 606 0.98

8 10 6.5 9.4e+03 -0.9 0.1 18 27 728 737 724 746 0.81

9 10 1 1.5e+03 1.7 1.7 12 37 842 867 826 877 0.75

10 10 0.12 1.7e+02 4.7 2.2 18 41 903 923 887 925 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2e-15	2.9e-12	48.8	0.8	1	44	6	49	6	49	0.99
2	10	1.9e-15	2.8e-12	48.9	0.8	1	44	109	152	109	152	0.97
3	10	0.065	94	5.5	1.9	17	40	179	199	177	205	0.85
4	10	3.7e-12	5.3e-09	38.3	1.0	1	44	248	291	248	291	0.97
5	10	6.6e-10	9.6e-07	31.1	1.1	1	44	344	387	344	387	0.97
6	10	1.7e-10	2.5e-07	33.0	5.4	1	43	458	500	458	501	0.97
7	10	7.8e-14	1.1e-10	43.7	6.5	1	44	563	606	563	606	0.98
8	10	6.5	9.4e+03	-0.9	0.1	18	27	728	737	724	746	0.81
9	10	1	1.5e+03	1.7	1.7	12	37	842	867	826	877	0.75
10	10	0.12	1.7e+02	4.7	2.2	18	41	903	923	887	925	0.87

Sequence Information

Coding Sequence: ATGTCCACTAAAAGATCACCTGTTTGGAATTTTTTTACCGAATCAAGCGAATTCAAAGGAAAAGCCACTTGCAATATTTGCAAATGGCAGTTGTCTTTTAGAACGACAACCACAAATTTAATGAAACATGTTCAGAGAAAACATCCAGAAGTTAATATCTTTTCGTCTAATCAAATTAAAAGTCAAGAAATCTTaatGTCTCAGATATTGCCAaaagaaattgaaattattGTTGAAGAGGAGTATAGTGGTGAACCAATTAAGGAAGGTACTGAATCTATTACAGAGgataattgtttaaatgttgAAAATTCTAAGAAAATATCAAGAATGTGGCTGTATTTCACAAAATCACAATCAGATGACTCTTTAGCTGCTtgcaatatttgtaataaagagatttcttataaaacaaacacctcaaatcttaaaaaacacttAATAAGATTACATCCTGAGCAATTATTAGAAGGTAACTGTGATCTTGAAGATGCAGATGATATTTCTGGAGAAAACTCAGATTTGATTGTTTCAATGAAATgctctttttgtttaaaaacattcaTATCTAAATCTAATCTTATCAATCATATAAAAAACCATATTCAAAACAAAGAACTCATTTATGATGGAAGTGAttcagaattaaaagaaattttgtcAAGTAGTGATGATGAACTAAGAAGCAAAAAACAGCAAAAGGAGTTCAGTTCTActaagtataatttttttaaaactacatCTGATTTGTGggaattttttactaaaatacatGATTCAGATTCAGTAGCTTGTTGTAGTCTTTGTCAAATTCAATTATCCTATAAAAGTAATACAACTAATTTGAAAAATCATCTAGAACAAAAACATCCAGAAGTATTGaaaatttatgaAGGTaacaaacaattatttataactgAAGCTTCTTTTAAAGGATTtgaagaaaacaaaattaaaagtgaGGAATATGTCAGTGAAAATATATTTGTTGAAGAACTCAATATTGGTACTGATATGCATAATAGGAGATCTCAAATTTGGAATGTATTTACCATAAAATCAGCATCAGATTGTACAGCAACTTGTAACATTTGTGATCAACAGTTTTCCTTTAAGAGCACAACAAATGACCTTAAAAGACATTTTCAGAGAAAACATCCAGATTTATCAATGgaaagtaaaatagaaaaaattaaaGTTAAACATGATCCTGAAGAAAGTAATCAGATTCAAAAAGCAACTAGTGTTTTTGATGAAGATCAAGAATTTTTCAGTGAAAAAAAGacaaagaaatcatcaGTTATATCATTACAAAATACAAGTCCTAGTACAGATAAAAATACAGATggtttaaaaaaatccaaatactATTCAGCAATTTGGAATCATTTTACTAGGAACAAACCCAATGAATACTTGGCTACTTGTAATGCATGTGGTAGAGAATTATGTTATCGAACATCAATTACTAATCTCAAAAAACACTTGTGTAAGATGCATGCAGATATTGTAATAAATGTTGAAGAAGAGGTGAGTTACAGTGAAgTGTATGAACAATCAAGTGATCAACAAGATTTAGTTATTCAAAATGGTGATAGTGATAATAAATCtacagataaaaatatttatatcattAAAGGTAAGAAATTATACcaaccatttttaaaaaaggagaGGAAGCATTATTCAAAACTCTGGAATCATTTTACAAGGAAAAAAACAGATGAATGCATAGCATCTTGCAATATTTGCCATAAAGAAATCGGATATAGAACATCAACATCTAATCTGAAAAAACATTTAATCAGTGTTCATTCAGATATTGATTTTGAATTAGAGACTGAAATACCTCAAAATCAAttaatagaCGCGGCTCATGTGATTTGTCACAGTTGTGCAGATGATATAGAAAAAGTTTATCAATTTAAACAGAAAATATCAAAAGCCTTTGATTTTTGGAGTAAATTAGAATCAGAACTCCAAACTGAATGTATTGACAGGAGCAACAGTGAAGAAGTTCATCCAGATTACACAGAAATGCATGTTAACAGTAGCAGTTTAATGAAATTTACTTGTGACAGATGCCAAGAAGAATTTGAATCTGCTTCAACAATGTTAAACCACACTTGTTCTTGGAAACCTGTCAATCACAAATCAAATGGTAAAGCCCCCATCAAATATAGTtgtacatattgtggaactgaTTTTAACAAACAATGGAAACGGGATAGACACTCAAAAAGGCAAGTTGAACAAAACTTTTCAAGAAAATTCAATACTAAATCAAGAAAAggattaaaaagaaaagaaaatgctGCCAAAAAGTGTCGAATTCCTGTACAGAAATTATTCAATTGTACATTTTGCGACAAAACCTACAAATCTGCGTTTTTGCTTCGAGAACATATGTCTACTCATACAGGTGAACGGAACTACATGTGTCATTTATGCGGTAAAACATTTCATAGAGCATCAGTTAGACACAAACATTTACAAGCTCATAATCGTAAACCAGGCGAAAAGATCAAACGCAAGCAGTTTTTATGTTTCATTTGTGGTAAAACTTTTCCCGCAAACGTAGCAACCAGACACATGAGGGTGCATTCTGGAGTCAAAAGAAAAGAGTGTCATATTTGTTACAAGAGGTTTGATCAGTTGGCACATTTGAAAgtacatCTTCGGACACATTCTGGTGAAAGACCATATGAATGCAACATCTGCAATGGAAAGTTTTCTTTGGCAGCGACTCTTCGCAAACATTTACGACGTCACAGCGATATGGATAACTTAATAGCAATGGAAGATCCAGCACACCAAGAACTATCAAAATATGATTCTACCAGAGAATAG
Protein Sequence: MSTKRSPVWNFFTESSEFKGKATCNICKWQLSFRTTTTNLMKHVQRKHPEVNIFSSNQIKSQEILMSQILPKEIEIIVEEEYSGEPIKEGTESITEDNCLNVENSKKISRMWLYFTKSQSDDSLAACNICNKEISYKTNTSNLKKHLIRLHPEQLLEGNCDLEDADDISGENSDLIVSMKCSFCLKTFISKSNLINHIKNHIQNKELIYDGSDSELKEILSSSDDELRSKKQQKEFSSTKYNFFKTTSDLWEFFTKIHDSDSVACCSLCQIQLSYKSNTTNLKNHLEQKHPEVLKIYEGNKQLFITEASFKGFEENKIKSEEYVSENIFVEELNIGTDMHNRRSQIWNVFTIKSASDCTATCNICDQQFSFKSTTNDLKRHFQRKHPDLSMESKIEKIKVKHDPEESNQIQKATSVFDEDQEFFSEKKTKKSSVISLQNTSPSTDKNTDGLKKSKYYSAIWNHFTRNKPNEYLATCNACGRELCYRTSITNLKKHLCKMHADIVINVEEEVSYSEVYEQSSDQQDLVIQNGDSDNKSTDKNIYIIKGKKLYQPFLKKERKHYSKLWNHFTRKKTDECIASCNICHKEIGYRTSTSNLKKHLISVHSDIDFELETEIPQNQLIDAAHVICHSCADDIEKVYQFKQKISKAFDFWSKLESELQTECIDRSNSEEVHPDYTEMHVNSSSLMKFTCDRCQEEFESASTMLNHTCSWKPVNHKSNGKAPIKYSCTYCGTDFNKQWKRDRHSKRQVEQNFSRKFNTKSRKGLKRKENAAKKCRIPVQKLFNCTFCDKTYKSAFLLREHMSTHTGERNYMCHLCGKTFHRASVRHKHLQAHNRKPGEKIKRKQFLCFICGKTFPANVATRHMRVHSGVKRKECHICYKRFDQLAHLKVHLRTHSGERPYECNICNGKFSLAATLRKHLRRHSDMDNLIAMEDPAHQELSKYDSTRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01106770;
90% Identity: iTF_01106770;
80% Identity: iTF_01106770;