Ocom053940.1
Basic Information
- Insect
- Ophraella communa
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_035357415.1
- Location
- CM068987.1:28434851-28436927[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.41 2.1e+04 -2.4 2.1 58 60 60 62 10 119 0.48 2 3 2e-103 1e-98 332.1 7.4 1 218 174 382 174 382 0.94 3 3 0.18 9.2e+03 -1.3 1.5 72 99 391 418 381 446 0.41
Sequence Information
- Coding Sequence
- ATGGGATCTAACAGTTCAGCCAGCATGGCATCGTCATCATCAACATCATCCATCTCATCATCAGCATCATCCACCTCATCGTCAATCATGTCCGATCGAAATGATACGATCGAACCATCGAAAACAACCATCGACCAGCGGCAAATCGCATCCGACCAAAACGTAGAATCATCAACCCACCATCAAGCAGAAGTAACAGAACCTTCCGGTACAAACTTCGAGTCTAAATCAAAAGCAATAGACGTAGACGGTGAAGATTCGTCCACTGAAAGTCTTACGGCTACCGAAGAAATGATAGAAGAACCTCACGATAGATCCGACGGATCCGATTCGGGCATGGGTTCCGAAGTGAACGAAGAACGACCAATAGAAATAGCCACTAACATGGAGAGTTCTTTTTTGTACAATACTCCTCAGCTTGAAGAGTTCACCAGGCAAGTTTCGTCGTCTTCCTCGCAAGAGCTTAAGAGCAGTTTAAAGAGGAAGATTTGCTCTGTGGGATCGGACGAGCCGGAAGCTAAAAAGAGAAAAGGCATCACTTTCGACAGCGTGACGGTGTTCTATTTTCCTAGGGCGCAAGGGTTTACTTGCGTCCCATCTCAAGGCGGCTCCACCTTAGGTATGGGTGCAGCTCATTCGTACGTCAAGAAGTTTTCCATCGCCGAGCATGCCGTCGAGCAAAGGAGGATCCATAGACAGCTTATACAGCAACTCAGATCTGAAAGAAATGTTTCCGCAGGTGCTGCCACTTCCAGCGAGGAATCCGACAGCGAAGACGAGGCCAGCGAAGCCTCCGATACGGAAATGGACCCGGACaactattattttcttcaaccgGTGCCTGCGAGGCAACGCCGCGCGTTGCTCAGAGCCGCAGGAGTTAGGAAAATTGATTCCGTCGAAAAGGACGAATGCAGAAGCATCAGAACCTCGAGGGAGTTTTGCGGGTGCGGCTGCAAAGGTTACTGTGATCCGGACACTTGTTCTTGCAGCCAAGCGGGAATCAAATGCCAAGTGGATAGACTGAATTTTCCGTGCGGTTGTTCCAGGGATAATTGCGGGAATTCCAGCGGAAGAATCGAGTTTAATCCGGTTAGGGTGAGGACGCATTTCATACATACGCTTATGAGGTTGGAGTTGGAGAAGGAAAAAGAGGGGAAATCGACGACGGAAAGCAAGGAGGTGCAGCAGCAGCAGCAACAGCAGCAAAATTGGATGGATAACGAGCGATTGGCGTCCGAGCAAGTGCAAAAATCACCAGTTAGTAAATACAATAGTAGTTTGCTGAGGGACGTTACGCTCTCGGCGGACGTGGAAGCTGAAAATTGCGTTCATACCGGAAGTTTTACTAATTTGCATTACGGAGCGCCAGGAGAAGGACCCGGGAACCATCTACCAGATAGAGCGGATTCTTTAGATCTCTATACCTtcagAGAAAATTGTTATGGGGACGAGGAGCGAAAACAGCCTTTCCACGGTCAAGCTTTCCACTTTTCCAACGTCGGTTTCAGCAGTTACGTCCCTGGCGGGCACCAGACTCAATACCCTCAACCTCCGTACCAACAGAACTTTGGCGAGTTTCCCCCGATGTTCACCCCATACGGGGGTATGTACGTCCCCGAGTTCAACCACCAGAAACCCGCGGAAACAGCCGGTTTCCATCATCAACCTTACGAAAATTTCAACGGGGAGAATTTTTCCGAATCTAAAGAAAACCAGTACACCAATTTGAACCCTGTAGGTGGTGGCAGTAAGATCGAAACGTTTTCGGAATTGTTGAACGGGCGTTTTAATAATTATCATCCCGGTTACGAGGGTGAGTTTGCGGGTAACTTGGAATGCGGCAGTGGGGGAGGATTGGAGAACACGACCAACGGTAGTGGTAGTGGTGGTGCTGAAGAGTGTGACGAAAATTTTGGGGAGATCATCAAAAAGTCGATGGTCGAGACGGTTTCAGCATAA
- Protein Sequence
- MGSNSSASMASSSSTSSISSSASSTSSSIMSDRNDTIEPSKTTIDQRQIASDQNVESSTHHQAEVTEPSGTNFESKSKAIDVDGEDSSTESLTATEEMIEEPHDRSDGSDSGMGSEVNEERPIEIATNMESSFLYNTPQLEEFTRQVSSSSSQELKSSLKRKICSVGSDEPEAKKRKGITFDSVTVFYFPRAQGFTCVPSQGGSTLGMGAAHSYVKKFSIAEHAVEQRRIHRQLIQQLRSERNVSAGAATSSEESDSEDEASEASDTEMDPDNYYFLQPVPARQRRALLRAAGVRKIDSVEKDECRSIRTSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKEKEGKSTTESKEVQQQQQQQQNWMDNERLASEQVQKSPVSKYNSSLLRDVTLSADVEAENCVHTGSFTNLHYGAPGEGPGNHLPDRADSLDLYTFRENCYGDEERKQPFHGQAFHFSNVGFSSYVPGGHQTQYPQPPYQQNFGEFPPMFTPYGGMYVPEFNHQKPAETAGFHHQPYENFNGENFSESKENQYTNLNPVGGGSKIETFSELLNGRFNNYHPGYEGEFAGNLECGSGGGLENTTNGSGSGGAEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -