Ocom044501.1
Basic Information
- Insect
- Ophraella communa
- Gene Symbol
- rcor2
- Assembly
- GCA_035357415.1
- Location
- CM068986.1:5148876-5155082[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-09 4.6e-06 29.0 0.0 3 46 130 173 128 173 0.97 2 2 9.8e-14 3.8e-10 42.1 0.0 3 46 376 419 375 419 0.98
Sequence Information
- Coding Sequence
- ATGGTGTTGGCcgaaaaaaatagtgaaaacatcAGAAACGGGAGAAGTCGAGGACCAAGCCCGAATGGTAATGTTCTGGCAGATTCTACCAGCGAGGAAGAGAATAGTGtacCGGTGGATAAAATACGAGTAGGACGTGATTATCAAGCCGTTTGTCCAGAATTACAACCTGAAAATCAGAGAAAGCCAGAACTTCTAGCAGACAGAGCACTCCTAGTTTGGTCACCAACAGAATGCATTCCAGAATCTAAATTGGAAGATTACATCGTGCTCGCTAAAGACAAATATGGTTACAATGGAGAACAAGCCCTTGGCATGCTGTTTTGGCACAAACACGATCTTGAAAGAGCTGTGCTCGATTTGGCGAATTTCACGCCGTTTCCAGACGAATGGTCAGTCGAAGATAAAGTTCTGTTTGAGCAAGCTTTCCAATTTCATGGAAAAAGCTTTCACAGAATACGTCAGATGTTACCTGATAAGACAATAGCAAGTTTGGTGAAATACTACTACAGTTGGAAGAAGACGAGATCGCGCACAAGTCTGATGGACAAACAAGCCAGGAAACTACAAAATTCTAAAGAAGAAGGAGCACATTCAGAAGTGGGATCCGAAAATGGTTCAAATGAAGATTCTGATCATGACGATAAGAAATGGGTATTCCATCGCGGTATTCAGCGTAAAACTGGATCTGCATCCAGCTCTTATTCTAAGGACAGTAATTCTACACAGGGTGAGGGTGGAGCATGTTCTAACTGCGGAGTCGCCTGTACGGTCACTCGTGTAACCACAAAAGGGAATCTATGTAATTCCTGCTTTCAGCATTGGAGACGAACAGGTACTTTGAGGCCCACTTCTGGGCCTACGGGCGGTAAACGTGGCACCCCGTTAGGGGCACGTCATAAACGCAAGCCCCCCCGCGGCATGTTCATCAACCACGACGATCTGGCAGCAATGGCTTCGGGCAATACGGGCGTCGTCATGCTTAAAGCCATGGACCGAGAACTAGATTCCCTACAGAGACAAATCCAACAGAACAAACAGTCGATCAGCTGCTTGAAACGTAAACATTGCGATTCCATCGAAGATCTGCGACACGGTACCGATCAAAATTCCCGCTTTAACGCTCGTTGGACCAACGAGGAACTTCTATTGGCCGTCCAAGGCGTTCGAAAATACGGCAGAGATTTCAAGAGTATCGCCGAGGTGATCGGTAACAAGACCGAACATCACGTCCGCACGTTCTTCATCAATTACAGAAAGCGATACAATTTGGACAACATCTTGAAGGAATGGGAAAAAGAACACGGACCATTACCGGAAGATATGGCCGATATGAAGAGCGAAAACGACGACAACGATAATGACGTTATCTGCATATCTTCCTCGCCGCCTCCTGCCGCAAAGAAAGACTTTAAGAACGGCAAAGCGAGTCAGGTTAACAAATGA
- Protein Sequence
- MVLAEKNSENIRNGRSRGPSPNGNVLADSTSEEENSVPVDKIRVGRDYQAVCPELQPENQRKPELLADRALLVWSPTECIPESKLEDYIVLAKDKYGYNGEQALGMLFWHKHDLERAVLDLANFTPFPDEWSVEDKVLFEQAFQFHGKSFHRIRQMLPDKTIASLVKYYYSWKKTRSRTSLMDKQARKLQNSKEEGAHSEVGSENGSNEDSDHDDKKWVFHRGIQRKTGSASSSYSKDSNSTQGEGGACSNCGVACTVTRVTTKGNLCNSCFQHWRRTGTLRPTSGPTGGKRGTPLGARHKRKPPRGMFINHDDLAAMASGNTGVVMLKAMDRELDSLQRQIQQNKQSISCLKRKHCDSIEDLRHGTDQNSRFNARWTNEELLLAVQGVRKYGRDFKSIAEVIGNKTEHHVRTFFINYRKRYNLDNILKEWEKEHGPLPEDMADMKSENDDNDNDVICISSSPPPAAKKDFKNGKASQVNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00755566;
- 90% Identity
- iTF_00025978;
- 80% Identity
- -