Basic Information

Insect: Ophraella communa
Gene Symbol: Os03g0216600_1
Assembly: GCA_035357415.1
Location: CM068985.1:20610890-20617883[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5.7e-09 1.3e-06 30.4 0.3 2 35 13 46 12 51 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5.7e-09	1.3e-06	30.4	0.3	2	35	13	46	12	51	0.91

Sequence Information

Coding Sequence: ATGGATACTAAACCcaaaaaaagaataagaaaatcTAAAGAAACTATACAGGAGGCTATAGACATGGTGTTAGAGGGTAAAATGTCTATTAGATCAGCAGCAACAGCTTTTAATATAGCTAAATCAATGCTAGCTCGACTTGTGGCTCAGGCAAAAGCACATATTcctgaaaataaatttgtttatgaaCCACAGATTGGAAACAGAAGAGTCTTTTCACTTGAAGAAGAGTTAATGTTAAGCCAATATTTGAAAATGTCCTCAAAAATGGCACATGGGCTCACATATTCACAAACTCGTGAACTTGCTTACCAATACgctgaaaaactaaataaagaaatgCCAAAAAATTGGAGCACTGATAAAAAAGCTGGTGTAGATTGGATGAAATTGTTTATGAAGAGACATCCCGAGCTGTCACTACGCCGTCCGGAGAAAACGAGCTTGTCGCGGGCAACTGCTTTTAATTCAACGACAGTGAAGACATTTttcgaaaatttggagaaagtGTTAAAAAAATACTCATTTACAGGAGACAGAATTTATAACGCTGACGAAACAGGTTTAACCACTGTTAGTGAACTGCCCTCCATTATCGCTGAACGTGGAGTCAAGCAAGTGGGTCAAGTTACCTCTGCTGAACGGGGACAACTTGTAACAATGTTGGCATTTGTTTCTGCTTCAGGTAACCACGTTCCCCCGGTTTTCATATTTCCTAGGGTTCGGTTTAAGGACTTTATGCTGGAAAATTGTCCTACCGGAAGCCTAGGATTATGCCACAAAAGTGGATGGATTACATCTGATAACTTTTATCTGGCATTCAAACATTTTGTGGAAAAAGTACGTCCATCTAAAGAAAACCCGGTCTTACTATTAATTGACAATCACGAGAGTCACATCAACATTGATGTCATATATCATGCTCGTGAAAATGGCGTCATAATATTGACATTTCCGCCACACTGCAGTCATAGGCTGCAGCCCTTAGACATCTCCGTATTcgggccattcaaaaattattttaaagatgCCCAAAATGACTGGATGGTATCAAACCCAGGTAAAACCATATcaatttatcatttaccaaaatTCGCAAACTCTGCTTTTATCAGTGCTTTTACACCCAAGAATATTTGTGCCGGATTTTCAAAGGCCGGTATTCACccatttgataaaaatatatttggggAACAAGATTTTCTTTACGCGTCTGTAACAGACCATGAAGATCCAAATAAACAAGTTGAATCAGAAGTGTCAAACCCAGTAGAACCTGGACCCTCCTCTGAACCACACCAGTCCTGCTTCACTGACTCATCTATAATTATATCACCTGCTTCCATTAAACCATTTCCAAAGGCACCTCCTAGACAACTTAATCGAAGAGGAAGAAAAAAAGGAACTAGTCGCATTATTACTGCCACTCCAGAGAAAAACGAAATAGAGGAAGCCTgtgcattaaaaaaaattaaattaaataagatcAACACGGatgtaaaaataaaagcaattaaaaaaaaagtcttGCAAAGTAGTAGCAGTGAAAGTAGCAATGAAGAGGATGTTGTTGGCGAGAGTGACCAATCTTTGGATTGGGAGCTTGAGGAAGAAATGAAGCTCGTCGAGAATGATTCTTTTAACGTGGATGATTTTGTAGTCGTCAAATtcgtaaaaaagaaaattattagacattttattGGACAAATAATTGAAGTCATGGAAAATGGAGAAGTCActacgAGATCGACTCACAAAGGACTGTTAATCAGAGATAACCATGAAAAACGTCCTTTTATCTTGACGAGATCTCATTTTGCGGGATCACAAAGATTCGCGGCTATGTGGACAGGAGATAATAGTGCCAGCTGGGAACACTTTGCAAATACTTATTCCGAATGTATGAACGCGAACATGGTCGGTATGGTCTTCTGTGGTGCCGATATCGGTGGATTCATAGATGATCCCAGCACTGAGCTCTTGTTACGTTGGTATCAGGGAGCAGTGTGGTTGACTTTCTTTAGAGGTCATTCTAGTAGAGAAAGTCAGAGACGTGAACCGTATTTGCTTCCAGACTATGCACAAGATGTTCTcagaaaaactttaaatatCAGATATCAGCACATTCCATCTTTCTACACGCTTTTCTTTGAACATACTAGAACAGGAGACCCAATCATCAGACCCCTCTATTATGAGTATCCCGCAGTCGAGGACAGAGACACCCAAGTGCTGGTTGGGACGGATATAATGGGAGTTGCTGTTACCAAAGAAAACGTGAATTTCGTTCAGGTTTACATACCTGGAAAATCGACTCAAGACATCTTCGAAAAGGATCATTGGTTCAGAGTGGACGACAACTCATGGTCCGTGTTGCAAGGTGGAGAATTGTATAACGTTCAAGTCGATCTCAATACCtcgcCATATTTTTACAGAGCCGGTAGTATAATTTTCAGAAGGGACGTAGTAAGAAAATCTGCAGTAGCAGCTTTAAAAGATCCTTTCGCCATTTATATAAACCTCAATCAGAAATCCCAAGCTTCTGGACGTCTTTACGTAGATGACTACTACAGTTTTAACTATACGAACagcaaacaatatttttatgtaaatgttGATTATATTTCTAGCACCGGTGGTATACAACTGAGATGGATTCGGAAGTCGCGAAATTACCGTAGAGCAGCCAAGAGGAATGAAAGAGTATGTAATACTCACACTTTGAAGACGTGCGGTTATTGTGACAAGACTTGCAAAGAAAGTATTTGTCCACAGATGAATTCAGATGATCTGGAAAAGAGGTGGAAAACGGCATCCAGCAAAAAACTATGCTTCAGTTGTCTTCAGAAAAATCTTCAGAAATTCAAATGCAGAAAGAGAAAGGTTTGTGGAACAAATGGCTGTAAGCTCCATCATCATCCATTATTACACAAAGAGTTAGCCAATCAGAATGATAGTAATCAAGAAGCGATGAGAAATACTGAAGAAACTATCCAGGAAAGAGTGTGTTCAATCAACAAACCTTCTACTATTCTGTTGAGAATGATTCGCGGAAAACTACATGGTCCACGAGGAGTTATTCCTATTCTAGCTCTTTGCGATGAAGCGTCAACTGTGACATTATTGGATGCAGAGGTAGCGGTTTCACTTGGACTAAATGGAACAAAAGAATCACTTTGTCTACAGTGGACGAACGAACATGTGATGACTGAAGAAGATTCTTTACGTTTAGATGTGAAAGTTTCCAAAATTGATGATGAcagcaaaatatttattatgaaaaGTGTCCGAACTGTTAACCATATGTCATTACCCGAACAATATGTCAACACATCCGACTAA
Protein Sequence: MDTKPKKRIRKSKETIQEAIDMVLEGKMSIRSAATAFNIAKSMLARLVAQAKAHIPENKFVYEPQIGNRRVFSLEEELMLSQYLKMSSKMAHGLTYSQTRELAYQYAEKLNKEMPKNWSTDKKAGVDWMKLFMKRHPELSLRRPEKTSLSRATAFNSTTVKTFFENLEKVLKKYSFTGDRIYNADETGLTTVSELPSIIAERGVKQVGQVTSAERGQLVTMLAFVSASGNHVPPVFIFPRVRFKDFMLENCPTGSLGLCHKSGWITSDNFYLAFKHFVEKVRPSKENPVLLLIDNHESHINIDVIYHARENGVIILTFPPHCSHRLQPLDISVFGPFKNYFKDAQNDWMVSNPGKTISIYHLPKFANSAFISAFTPKNICAGFSKAGIHPFDKNIFGEQDFLYASVTDHEDPNKQVESEVSNPVEPGPSSEPHQSCFTDSSIIISPASIKPFPKAPPRQLNRRGRKKGTSRIITATPEKNEIEEACALKKIKLNKINTDVKIKAIKKKVLQSSSSESSNEEDVVGESDQSLDWELEEEMKLVENDSFNVDDFVVVKFVKKKIIRHFIGQIIEVMENGEVTTRSTHKGLLIRDNHEKRPFILTRSHFAGSQRFAAMWTGDNSASWEHFANTYSECMNANMVGMVFCGADIGGFIDDPSTELLLRWYQGAVWLTFFRGHSSRESQRREPYLLPDYAQDVLRKTLNIRYQHIPSFYTLFFEHTRTGDPIIRPLYYEYPAVEDRDTQVLVGTDIMGVAVTKENVNFVQVYIPGKSTQDIFEKDHWFRVDDNSWSVLQGGELYNVQVDLNTSPYFYRAGSIIFRRDVVRKSAVAALKDPFAIYINLNQKSQASGRLYVDDYYSFNYTNSKQYFYVNVDYISSTGGIQLRWIRKSRNYRRAAKRNERVCNTHTLKTCGYCDKTCKESICPQMNSDDLEKRWKTASSKKLCFSCLQKNLQKFKCRKRKVCGTNGCKLHHHPLLHKELANQNDSNQEAMRNTEETIQERVCSINKPSTILLRMIRGKLHGPRGVIPILALCDEASTVTLLDAEVAVSLGLNGTKESLCLQWTNEHVMTEEDSLRLDVKVSKIDDDSKIFIMKSVRTVNHMSLPEQYVNTSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -